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2024-05-06 03:56:43, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Hyposmocoma kahamanoa lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog (LOC113225650), mRNA. (1166 bp)
db_xref="GeneID:113225650" CDS 87..467 /gene="LOC113225650" /codon_start=1 /product="lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog" /protein_id="XP_026313804.1" /db_xref="GeneID:113225650" /translation="MEEKSGNPLPYSGVPTYPHQQLPPDPVNVVPGGVIVQNPIQPNVVSAIVVSPPVGPKPSHMTCQSCGAEIVTRVEYKPSTKTHLIALALCSLGCWCCVCIPYCKDSCQNADHYCPNCDSYIGVYSS" misc_feature 252..458 /gene="LOC113225650" /note="LITAF-like zinc ribbon domain; Region: zf-LITAF-like; pfam10601" /db_xref="CDD:431386" ORIGIN //...
AA_position 61
XM_026458019.1 - Hyposmocoma kahamanoa - NCBI
PREDICTED: Metaseiulus occidentalis copper-transporting ATPase 2-like (LOC114827997), mRNA. (570 bp)
SRA reads, 1 Protein" /db_xref="GeneID:114827997" CDS 1..570 /gene="LOC114827997" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_028966327.1" /db_xref="GeneID:114827997" /translation="MEPTVEHTLSVLGMTCKSCVNSIQLTIGERSDVKSVKVALDEAKAYVSAPASVSPAVLAAAIDDMGFEAAYLHTTTSIRIDGMTCQSCVLNIQNTLTPVEGIIEIEISLEEAKGTFKFDAKSISVQQIVEHIDDMGFIPKWPYEEDVDKDFDQIAKRHASALDEVDAILSGSDPDGWVTNSEDTIRETL" misc_feature 22..210 /gene="LOC114827997" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or...
AA_position 83
XM_029110494.1 - Galendromus occidentalis (western predatory mite) - NCBI
PREDICTED: Branchiostoma belcheri UPF0711 protein C18orf21 homolog (LOC109475800), mRNA. (1503 bp)
genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:109475800" CDS 3..584 /gene="LOC109475800" /codon_start=1 /product="UPF0711 protein C18orf21 homolog" /protein_id="XP_019632127.1" /db_xref="GeneID:109475800" /translation="MPDHMTCQSCGNLLLPGNHTVRLRPKRKMTSATRRVMSKVSKGQMASASEVKLLKKFQERKNHLVVQCSVCQGKAVIPAATRKHVVMATSTSHGSPAGTPVVSRRIAKATRRLVSTPHTSSSAFLSTPDSSTKVVGSSPGTPGSGLRVPGSSPGSSGRKGKQQKQRHAQLRHMLSQQSLGDTSTSLSDFLQSL" misc_feature 18..536 /gene="LOC109475800" /note="Domain of unknown function (DUF4674); Region: DUF4674; pfam15719" /...
AA_position 5
XM_019776568.1 - Branchiostoma belcheri (Belcher's lancelet) - NCBI
Cordyceps militaris CM01 uncharacterized protein (CCM_09398), partial mRNA. (597 bp)
GeneID:18171401" CDS 1..597 /locus_tag="CCM_09398" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_006674595.1" /db_xref="GeneID:18171401" /translation="MLNLHPSPVLAAAILSLLTTPVLGVDTCSTDASRWDYWWYGSGPRYNCAEHNVCHISHIDQRTIGWSVTQGGSLGFNLAKSAALGFQSSYTWSESTTTGTTYSVDYYPPETERLWIKQWFAVLDMTCQSCDWVCYPMGQSVDNETDTGLNVGGQHCDRACDPHRHVIAWVPCRDSSCTEYQFSNADAQCDHSNHCQQN" ORIGIN // REFERENCE 1 (bases 1 to 597) AUTHORS Zheng,P., Xia,Y., Xiao,G., Xiong,C., Hu,X., Zhang,S., Zheng,H., Huang,Y., Zhou,Y., Wang,S., Zhao,G.P., Liu,X., St Leger,R.J. and Wang,C. TITLE Genome sequence of the insect...
AA_position 125
XM_006674532.1 - Cordyceps militaris CM01 - NCBI
PREDICTED: Buceros rhinoceros silvestris copper-transporting ATPase 2-like (LOC104494096), partial mRNA. (1869 bp)
gene="LOC104494096" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_010135186.1" /db_xref="GeneID:104494096" /translation="MERKLDNKMKRDLSCLATLSSKNITLVSVCKQQAAHDVPELLIIDEKSKAESLVTANSKSQNEEKHLQSYSMGMPEVSTVERQALSNTDSPPGCELEPTMKHRFAFDNMGYEESFETIPSSQECTVAVNVVGMTCQSCVQSIEGRISKVKGIVSIKVSLEQNNAVIKYLQSEISPEQICQEIQDMGFDANTAEERLTTAVNSSCLKEAVVKLRVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLGNQEAVIAYCPHIIKPDDLKSHITNLGYDCSIKSKSAPLKLGVLNLQRLQNANPKETPESLESDGVDLLVAEMGSTATVAVQIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKCAVVQYSPNLITLSALQQAIESLPPGNFKVCLLKGSEANKGASPSPALLCNLFREPLEDTTCTAVIRIDGMTCNSCVQSIEGTISQRQGVQ...
AA_position 133
XM_010136884.1 - Buceros rhinoceros silvestris - NCBI
Isaria fumosorosea ARSEF 2679 hypothetical protein (ISF_09486), partial mRNA. (609 bp)
GeneID:30025778" CDS 1..609 /locus_tag="ISF_09486" /codon_start=1 /product="hypothetical protein" /protein_id="XP_018699695.1" /db_xref="GeneID:30025778" /translation="MLNLHQCTLLTAAILSLLTTPVVGVDTCSTDASRWDYWWYGSGPRYNCAEGNVCHLSHIDQKTIGWSVTQGGSLSFSLAKSAALGFQSSYTWSESTTTGTTYTVDYHPPETERLWIKQWFAVLDMTCQSCDWVCYPMSQSVDNETDNETDTGLNVRGQHCQRACDPHRHVVAWVPCRDLSCTEYQFSNADAQCDHSNHCQHI" ORIGIN // REFERENCE 1 (bases 1 to 609) AUTHORS Shang,Y., Xiao,G., Zheng,P., Cen,K., Zhan,S. and Wang,C. TITLE Divergent and convergent evolution of fungal pathogenicity JOURNAL Genome Biol Evol (2016) In press PUBMED 27071652...
AA_position 125
XM_018853088.1 - Cordyceps fumosorosea ARSEF 2679 - NCBI
PREDICTED: Castor canadensis copper-transporting ATPase 2-like (LOC109676481), partial mRNA. (1809 bp)
including 1 sample with support for all annotated introns" /db_xref="GeneID:109676481" CDS 40..>1809 /gene="LOC109676481" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_020008462.1" /db_xref="GeneID:109676481" /translation="MKQSFAFDNVGYEGSLDGICSSPTTSSTISILGMTCQSCVKSIEDRISSLKGVVSIKVSLEQGSAAVKYVPSIMSLQQICHQVGDMGFEASIAEGRAASWPSRSSSAQEAVVKLRVEGMTCQSCVSSIEGKVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVTDMGFEAAIKNKMAPLSLGPIDVSRLESTNPKRLSAFANQNFNNSETSKYQGNHVATLQLGIEGMHCKSCVLNIEGNIGQLSGVQNIQVSLENKTAQVQYDPSLITPLSLKRAIEALPPGNFKVSLPDGAEESGPETGSSEIPSHGSPQRNQMQDACRTVVLSVTGMTCASCVQSIEGT...
AA_position 34
XM_020152873.1 - Castor canadensis (American beaver) - NCBI
Bos taurus copper chaperone for superoxide dismutase (CCS), mRNA. (1160 bp)
Splign:2.1.0" CDS 81..731 /gene="CCS" /note="superoxide dismutase copper chaperone" /codon_start=1 /product="copper chaperone for superoxide dismutase" /protein_id="NP_001039652.1" /db_xref="BGD:BT25087" /db_xref="GeneID:515022" /db_xref="VGNC:VGNC:26991" /translation="MASDSEDRGTACTLEFAVQMTCQSCVDAVRTSLQGIAGIQSVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILGGPGPVQGVVRFLQLTPERCLIEGTIDGLQPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSERHRGDLGNVRADEDGRAVFRIEDEQLKVRWRRRQGPFLTDPMSEAVVSPQRCGM" misc_feature 120..>653 /gene="CCS" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db_xref="CDD...
AA_position 20
NM_001046187.2 - Bos taurus (cattle) - NCBI
Alternaria hordeiaustralica uncharacterized protein (J4E84_000786), partial mRNA. (570 bp)
protein" /protein_id="XP_049248940.1" /db_xref="GeneID:73445396" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR024134" /db_xref="InterPro:IPR036163" /db_xref="InterPro:IPR036423" /db_xref="PFAM:PF00080" /db_xref="PFAM:PF00403" /translation="MTVPSFETIFAVPMTCQSCINDIEGSLQQLSGVNKITANLKDQLVSVEGTAAPSAIVEAIQATGRDAILRGSGRSDKNKVRGLVRMVEVAPSMTIIDLSIRGLSPGTYQATVRESGDISDGPESTGAIWEYLKAKKEDKPCRGIFGTIQVGKGGVGSVFLDKPIHIWEMIGRSIVVAREQDGKVCETAS" misc_feature 1..546 /locus_tag="J4E84_000786" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db_xref="CDD:215516"...
AA_position 14
XM_049383422.1 - Alternaria hordeiaustralica - NCBI
PREDICTED: Neovison vison copper chaperone for superoxide dismutase (CCS), transcript variant X4, mRNA. (1052 bp)
alignments, including 3 samples with support for all annotated introns" /db_xref="GeneID:122913160" CDS 84..752 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X4" /protein_id="XP_044115702.1" /db_xref="GeneID:122913160" /translation="MASDSGDGGTACTLEFTVQMTCQSCVDAVRTSLQGVAGKSQNNLRTVRRPLGGAGKPLKPTTLFPFTHVEEHRGRRKERLPSRTETRSQSLEYRSQACQARALYRLWCVLYLRCLGSEELDWAYMGPPPEGVSWIASSCCLRNGIILTKPTAALAMFHPRQLPILMSQLTGLEATLHGQKHLRRQSHQPGPGNRLPLILLNVHPVIQQGTMSMQASLMEEMR" misc_feature 123..>197 /gene="CCS" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db_...
AA_position 20
XM_044259767.1 - Neogale vison (American mink) - NCBI
PREDICTED: Ursus maritimus copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (936 bp)
alignments, including 27 samples with support for all annotated introns" /db_xref="GeneID:103679498" CDS 123..797 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_008707280.1" /db_xref="GeneID:103679498" /translation="MATDSGDRGTACTLEFTVQMTCQSCVDAVRTSLQGVAGVQSVEVQLENQMVLVQTTLPSEEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGPHGLHVHQFGDLTGSCNSCGDHFNPDGASHGGPQDSDRHGMFQTFQSTETCPKLLCPHHPLSTVTNSWPVQLLASPVSSTPPAFLHRYFEADQDIISCN" misc_feature 162..>602 /gene="CCS" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db...
AA_position 20
XM_008709058.2 - Ursus maritimus (polar bear) - NCBI
PREDICTED: Zalophus californianus copper chaperone for superoxide dismutase (CCS), transcript variant X4, mRNA. (945 bp)
alignments, including 11 samples with support for all annotated introns" /db_xref="GeneID:113915266" CDS 98..775 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X4" /protein_id="XP_027436888.1" /db_xref="GeneID:113915266" /translation="MASDSGDRGTACTLEFTVQMTCQSCVDAVRTSLQGVAGVQGVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLSPERCLIEGTIDGLEPGLHGLHVHQFGDLTGNCNSCGDHFNPDGASHGGPQDSDRHRGDLGNVHADADGRASFRIEDEQLKNPKQICSCDGLTIWEERGRPIAGEGRKEPAKPPAHL" misc_feature 137..709 /gene="CCS" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db_...
AA_position 20
XM_027581087.2 - Zalophus californianus (California sea lion) - NCBI
Alternaria metachromatica uncharacterized protein (J4E83_001981), partial mRNA. (591 bp)
protein" /protein_id="XP_049191905.1" /db_xref="GeneID:73390362" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR024134" /db_xref="InterPro:IPR036163" /db_xref="InterPro:IPR036423" /db_xref="PFAM:PF00080" /db_xref="PFAM:PF00403" /translation="MTVPSFETIFAVPMTCQSCINDIEGSLQQLGGVNKITANLKDQLVSVEGTAAPSAIVEAIQATGRDAILRGSGRSDKSHAPNVENKVRGLVRMVEVAPSMTIIDLSIRGLSPGTYQATVRESGDISDGPESTGAIWEYLKAKKEDKPCRGIFGTVQVGKGGVGSVFLDKPIHIWEMIGRSIVVAREQDGKVCETAS" misc_feature 1..567 /locus_tag="J4E83_001981" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db_xref="CDD...
AA_position 14
XM_049328933.1 - Alternaria metachromatica - NCBI
PREDICTED: Mesocricetus auratus copper chaperone for superoxide dismutase (Ccs), transcript variant X2, mRNA. (923 bp)
alignments, including 181 samples with support for all annotated introns" /db_xref="GeneID:101842998" CDS 85..771 /gene="Ccs" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_012970842.1" /db_xref="GeneID:101842998" /translation="MASDSGDGGTMCALEFAVQMTCQSCVDAVHKTLKGVAENLGAAVAILEGSNTIQGVVRFLQLNSELCLIEGTIDGLEPGLHGFHVHQYGDLTKDCNSCGDHFNPDGTSHGGPQDTDRHLGDLGNVLADADGRATFRIEDKQLKVWDVIGRSLVVDEGEDDLGRGSHPLSKITGNSGKRLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKDSVQPPAHL" misc_feature order(214..216,220..222,250..252,256..258,346..354, 526..531) /gene="Ccs" /note="...
AA_position 20
XM_013115388.3 - Mesocricetus auratus (golden hamster) - NCBI
Exserohilum turcica Et28A uncharacterized protein (SETTUDRAFT_165232), mRNA. (876 bp)
db_xref="GeneID:19399397" CDS 93..827 /locus_tag="SETTUDRAFT_165232" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_008029842.1" /db_xref="GeneID:19399397" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Settu1_165232" /translation="MTVPPFETIFAVPMTCQSCIDDIEGSLYKLGGINKVTADLKEQLVSIEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVGPSMTIIDLSIRGLSPGTYHATVRETGDISEGPESTGGIWELAQSQNEGKACRGVFGTVQVGKGGVGSVFLDKAIHIWETIGRSIVVAREQDGKFDKNDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 93..791 /locus_tag="SETTUDRAFT_165232" /note="copper, zinc...
AA_position 14
XM_008031651.1 - Exserohilum turcica Et28A - NCBI
Bipolaris sorokiniana ND90Pr uncharacterized protein (COCSADRAFT_174196), partial mRNA. (735 bp)
db_xref="GeneID:19132900" CDS 1..735 /locus_tag="COCSADRAFT_174196" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_007703239.1" /db_xref="GeneID:19132900" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Cocsa1_174196" /translation="MTVTPFETIFAVPMTCQSCINDIEGSLHQLSGINKVTANLKEQLVSVEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVSPGMTIVDLSIRGLSPGTYHATVRESGNISEGPESTGGIWELGQSQKETKPCRGIFGTVQVGEGGVGSVFLDKPIHIWEVIGRSIVVAREQDGKFDKNDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 22..699 /locus_tag="COCSADRAFT_174196" /note="copper, zinc...
AA_position 14
XM_007705049.1 - Bipolaris sorokiniana ND90Pr - NCBI
Alternaria arborescens hypothetical protein (AA0111_g2001), partial mRNA. (735 bp)
protein_id="XP_028510615.1" /db_xref="GeneID:39617329" /db_xref="GO:0005507|GO" /db_xref="GO:0006801|GO" /db_xref="GO:0016532" /db_xref="GO:0030001|GO" /db_xref="GO:0046872" /db_xref="GO:0046872|GO" /db_xref="GO:0055114" /db_xref="PFAM:PF00080" /db_xref="PFAM:PF00403" /translation="MTVPSFETIFAVPMTCQSCINDIEGSLQQLGGINKVTANLKDQLVSIEGTAAPSAIVEAIQATGRDAILRGSGRSDSAAVCILESHAPHVENKVRGLVRMVEVAPSMTIIDLSIRGLSPGTYHATIRESGNISDGPESTGAIWEHHKAKQEGKPCRGVFGTVQVGKGGVGSVFLDKPIHIWEMIGRSIVVAKEQDGKFDKNDPDTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 1..699 /locus_tag="AA0111_g2001" /note="copper, zinc...
AA_position 14
XM_028647725.1 - Alternaria arborescens - NCBI
Diutina rugosa uncharacterized protein (DIURU_002453), partial mRNA. (738 bp)
chromosome="Unknown" /country="USA" gene 738 /locus_tag="DIURU_002453" /db_xref="GeneID:54781104" CDS 1..738 /locus_tag="DIURU_002453" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_034012869.1" /db_xref="GeneID:54781104" /translation="MPTSTPFEIVFNVEMTCQSCAESIGKAISPLVSSYDCDVKNNTVTTTGGVAPSEIVKAIQSTGRDAIIRGTGKPNSAAVCILESFDPKDNDHPVKGLARIVSVSTSDLFIDLTINGLPKGVYYPSIRSVGNLSRGPLSTGSLFYQLSPIEVMVPSDETSIINSVGAPMVVDGFSGQSFLHANLGITDLIGRSIVVSRAHDLITEDALCGVIARSAGVWENDKTVCSCSGKTVWEERQDARGRGIN" misc_feature 31..702 /locus_tag="DIURU_002453" /note="copper, zinc superoxide...
AA_position 15
XM_034155106.1 - Diutina rugosa - NCBI
PREDICTED: Onychomys torridus copper chaperone for superoxide dismutase (Ccs), transcript variant X2, mRNA. (921 bp)
alignments, including 12 samples with support for all annotated introns" /db_xref="GeneID:118592453" CDS 120..809 /gene="Ccs" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_036057349.1" /db_xref="GeneID:118592453" /translation="MASDSGDGGTMCALEFAVQMTCQSCVDSVRRTLQGVTENLGAAVAILEGQNAIQGVVRFLQLTSELCLIEGTVDGLPPGLHGFHVHQYGDLTRDCNSCGDHFNPDGTSHGGPQDTDRHRGDLGNILAEADGRSTFRIEDKQLKVWDVIGRSLVIDEGEDDLGRGNHPLSKITGNSGKRLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKDSSAQPPAHL" misc_feature 162..>281 /gene="Ccs" /note="Heavy-metal-associated domain (HMA) is a conserved...
AA_position 20
XM_036201456.1 - Onychomys torridus (southern grasshopper mouse) - NCBI
PREDICTED: Ursus arctos copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (1092 bp)
Gnomon. Supporting evidence includes similarity to: 18 long SRA reads" /db_xref="GeneID:113244058" CDS 325..999 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_026338904.1" /db_xref="GeneID:113244058" /translation="MATDSGDRGTACTLEFTVQMTCQSCVDAVRTSLQGVAGVQSVEVQLENQMVLVQTTLPSEEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGPHGLHVHQFGDLTGSCNSCGDHFNPDGASHGGPQDSDRHGMFQTFQSTETCPKLLCPHHPLSTVTNSWPVQLLASPVSSTPPAFLHRYFEADQDIISCN" misc_feature 364..>804 /gene="CCS" /note="copper, zinc superoxide dismutase; Region: PLN02957" /db_...
AA_position 20
XM_026483119.4 - Ursus arctos (brown bear) - NCBI
PREDICTED: Priapulus caudatus copper-transporting ATPase 1-like (LOC106815582), mRNA. (5674 bp)
bases at 2 genomic stop codons" /codon_start=1 /transl_except=(pos:3314..3316,aa:OTHER) /transl_except=(pos:3554..3556,aa:OTHER) /product="LOW QUALITY PROTEIN: copper-transporting ATPase 1-like" /protein_id="XP_014675546.1" /db_xref="GeneID:106815582" /translation="MENISKHKEFANHSTNGNVAVISVKGMTCQSCVNTIEENIGKLDGIYEIKVSLGNKEAVVRFDESMTSAMEITDGIENMGFEAELECHLVRRVIAVEGMTCQSCVQTIQHKVVALQGVHSVQVSLETKIATVTYDAKITTTDAVMTAIDETGFIASLIQSKLEQSHVQVRVEGMTCQSCVNSIQDVIGKMPGVTSIVVSLSKKLAFVDHIPSVVSADDLCSAINDMGFDADLASAPPTDTTAVATVETTGDATCFVMIEGMTCQSCVKNIEGHISSVSGVRNISVSLKHKCATVMYDSGAISAAKVTDMIDDMGFIATLSDAPIVAPPGVKTQD...
AA_position 27
XM_014820060.1 - Priapulus caudatus - NCBI
Acanthamoeba castellanii str. Neff copper/zinc superoxide dismutase (ACA1_361140), partial mRNA. (699 bp)
gene 699 /locus_tag="ACA1_361140" /db_xref="GeneID:14924048" CDS 1..699 /locus_tag="ACA1_361140" /note="encoded by transcript ACA1_361140A" /codon_start=1 /product="copper/zinc superoxide dismutase" /protein_id="XP_004352554.1" /db_xref="GeneID:14924048" /translation="MEGTQGSEKLRTGVKAQLNVEMTCQSCVEGITTALKAVPGVTVLDVDLDRGEVELLTQRVPVEKLLRILRETGRSASLQGLGGEGEQLGSAVSQLEPADGSKEGPHATVALDRCLVEAILDGFPPGEYDLAVHEFGDLSDAERSVGDVFGRHPGYADKPAGEIGRIAVGQNGEGTIMADNKQLKVWDIIGRSVVARPASPGGARGVAFGVIARSAGVRENPKKICRCDDPDF" misc_feature 58..684 /locus_tag="ACA1_361140" /note="copper, zinc superoxide dismutase; Region:...
AA_position 22
XM_004352502.1 - Acanthamoeba castellanii str. Neff - NCBI
Alternaria postmessia uncharacterized protein (J4E82_002743), partial mRNA. (696 bp)
uncharacterized protein" /protein_id="XP_051591133.1" /db_xref="GeneID:76126596" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR024134" /db_xref="InterPro:IPR036163" /db_xref="InterPro:IPR036423" /db_xref="PFAM:PF00080" /db_xref="PFAM:PF00403" /translation="MTCQSCINDIEGSLQQLGGINKVTANLKDQLVSIEGTAAPSAIVEAIQATGRDAILRGSGRSDSAAVCILESHAPHVENKVRGLVRMVEVAPSMTIIDLSIRGLSPGTYHATIRESGNISDGPESTGAIWEHHKAKQEGKPCRGVFGTVQVGKGGVGSVFLDKPIHIWEMIGRSIVVAKEQDGKFDKNDPDTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 1..660 /locus_tag="J4E82_002743" /note="copper, zinc...
AA_position 1
XM_051729041.1 - Alternaria postmessia - NCBI
PREDICTED: Apaloderma vittatum copper-transporting ATPase 2-like (LOC104269173), partial mRNA. (1878 bp)
gene="LOC104269173" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_009866172.1" /db_xref="GeneID:104269173" /translation="MERKLDNKMKRELSCLATLNNKNITLVSIHKQQAAHDVPELLIIGEKSKMGSPVKTSSNLQKEEKLLQSYSMGMKEVNTVERQALSNTDSPPDCKLEPTMKHSFAFDNLGYEESFEAVPSPSSQEHTVAVNVMGMTCQSCVQSIEGRISKVNGIVSIKVSLEQNNAVIKYLQSEISPEQICQEIQDMGFDANIAEERLTTATVNLSCLREAVVKLRVEGMTCQSCAINIEGKIRKLHGVAKIKVSLGNQEAIIAYYPYLIQPDDLKSHISNLGYGCTIKSKSAPLKLGVLDVERLQNANPKETPASLEGDGVDLLVAKMSNTAAVAVRIEGMHCKSCVKNIEGNISDLPGIQSIRVSLEHKRAVVQYSPDLITLSALQQAIESLPPGNFKVCLPNGSEANRGASPSPALLCDPVREPLQDTCTAVIRIDGMTCNSCVQSVEGTILQRQG...
AA_position 135
XM_009867870.1 - Apaloderma vittatum (bar-tailed trogon) - NCBI
PREDICTED: Trachypithecus francoisi copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (1093 bp)
feature by RNAseq alignments, including 40 samples with support for all annotated introns" /db_xref="GeneID:117081743" CDS 164..931 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_033063968.1" /db_xref="GeneID:117081743" /translation="MTCQSCVDAVRKSLQGVAGVQDVEVHLENQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSDQLQNLGAAVAILGGPGPVQGVVRFLQLSPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGDHFNPDGASHGGPQDSDRHRGDLGNVHADADGCAIFRMEDEKLKVWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGQRLACGIIASSAGLFQNPKQICSCDGLTIWEERGRPIAGKGRKESAQPPAHL" misc_feature 164..865 /gene="CCS" /note="copper,...
AA_position 1
XM_033208077.1 - Trachypithecus francoisi (Francois's langur) - NCBI
PREDICTED: Papio anubis copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (1118 bp)
feature by RNAseq alignments, including 43 samples with support for all annotated introns" /db_xref="GeneID:101024502" CDS 189..956 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_009183844.1" /db_xref="GeneID:101024502" /translation="MTCQSCVDAVRKSLQGVAGVQDVEVHLENQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSDQLHNLGAAVAILGGPGTVQGVVRFLQLSPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGDHFNPDGASHGGPQDSDRHRGDLGNVHADADGCAIFRMEDEKLKVWDVIGRSLVIDEGEDDLGRGGHPLSKITGNSGQRLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGKGRKESAQPPAHL" misc_feature 189..890 /gene="CCS" /note="copper,...
AA_position 1
XM_009185580.4 - Papio anubis (olive baboon) - NCBI
PREDICTED: Dama dama copper chaperone for superoxide dismutase (CCS), transcript variant X3, mRNA. (943 bp)
by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:133070621" CDS 95..805 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_061019002.1" /db_xref="GeneID:133070621" /translation="MASDREDRGTACTLEFAVQMTCQSCVDAVRTSLQGIAGVESVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILGGPGPVQGVVRFLQLTPERCLIEGTIDGLQPGLHGLHIHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSERPGEGDTQNSVVAAQPEHLCRSLREALGTQSKLQIQSEGHRQWERASQRSTAETWGMSVPMRMAELSSGLRTSS" ORIGIN //...
AA_position 20
XM_061163019.1 - Dama dama (fallow deer) - NCBI
PREDICTED: Ovis aries copper chaperone for superoxide dismutase (CCS), transcript variant X3, mRNA. (889 bp)
gene="CCS" /experiment="COORDINATES: cap analysis [ECO:0007248]" /note="transcription start site" CDS 67..777 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X3" /protein_id="XP_042093595.1" /db_xref="GeneID:100846985" /translation="MASDSENRGTACTLEFAVQMTCQSCVDAVRTSLQGIAGIQSVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLSQNLGAAVAILGGPGPVQGVVRFLQLTPEHCLIEGTIDGLQPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSQRPGEGDTQNSVVAAQPEHLCRSLREALGTQSKLQIQSEGHRQWERASQRSTAETWGMSVPMRVAELSSGLRMSS" misc_feature 106..>516 /gene="CCS" /note="copper, zinc superoxide dismutase; Region:...
AA_position 20
XM_042237661.1 - Ovis aries (sheep) - NCBI
PREDICTED: Branchiostoma floridae UPF0711 protein C18orf21 homolog (LOC118403955), mRNA. (1259 bp)
samples with support for all annotated introns" /db_xref="GeneID:118403955" CDS 53..775 /gene="LOC118403955" /codon_start=1 /product="UPF0711 protein C18orf21 homolog" /protein_id="XP_035658747.1" /db_xref="GeneID:118403955" /translation="MSREKDVSRTCYLQQLASACSDTCPPLSRFLLHTAGSGSEGNHAAQSMPSHMTCQSCGNLLLPGNHTVRLRPKRKMTSAVRRVISKVSKGQMASAAEVKLLKRYQDRKNHVIVQCTVCQGKAVIPAATRKHVVMATSASPGSLAGTPVVSRRIAKATRRLVSTPQSHSSPILSTPGSSMMVAGSSPRTPDSSLRVGSSGPGSSGRKGKHQKQRHAQLKHMLSQQSLGDTSISLSDFLQSL" misc_feature 209..727 /gene="LOC118403955" /note="Domain of unknown function (DUF4674); Region: DUF4674; pfam15719" /db...
AA_position 52
XM_035802854.1 - Branchiostoma floridae (Florida lancelet) - NCBI
PREDICTED: Myotis lucifugus copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (976 bp)
alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:102440019" CDS 114..809 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_023620859.1" /db_xref="GeneID:102440019" /translation="MASDSGDRETACTLEFAVQMTCQSCVDAVRRSLQGVAENLGAAVAILGGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGPHGLHVHQFGDLTRNCNSCGDHFNPDGTSHGGPRDSDRHRGDLGNVHADANGQAIFRIEDEQLKVWDVIGRSLVIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICTCDGLTIWEERGRPIAGKGRKEPSQPSQPPAHL" misc_feature 156..>221 /gene="CCS" /note="Heavy-metal-associated domain (HMA) is a conserved...
AA_position 20
XM_023765091.1 - Myotis lucifugus (little brown bat) - NCBI
Cucurbitaria berberidis CBS 394.84 superoxide dismutase copper chaperone-like protein (K460DRAFT_370416), mRNA. (880 bp)
CDS 59..793 /locus_tag="K460DRAFT_370416" /codon_start=1 /product="superoxide dismutase copper chaperone-like protein" /protein_id="XP_040785013.1" /db_xref="GeneID:63851411" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Cucbe1_370416" /translation="MTVPAFETTFAVPMTCQSCVKDIEGSLHQLSGINKITANLEHQLVSVEGTVAPSAIVEAIQATGRDAILRGSGKSESAAVCILESHASHVENKVRGLARMVEVAPGITVVDLSIRGLSPGTYHATVRESGDISEGPESTGGIWEALTAKKESKPSRGIFGTVEVGKGGDGAVFLDKPIQIWEMIGRSIVVAREQDGKFDKNDPDTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 59..757 /locus_tag="K460DRAFT_370416" /note="copper, zinc...
AA_position 14
XM_040934160.1 - Cucurbitaria berberidis CBS 394.84 - NCBI
PREDICTED: Pollicipes pollicipes copper-transporting ATPase 2-like (LOC119092175), mRNA. (2406 bp)
coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:119092175" CDS 385..2406 /gene="LOC119092175" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_037071047.1" /db_xref="GeneID:119092175" /translation="MTPSGRGGAGTMMTQLVDLEPPEMTATISIKGMTCQSCVRNIETTVGDNAGIHSIVVSLPDESATVTFDPQLTSPQGICDMIDDMGFDASLPAAAGGGGDGAGDGASRTVVLDIGGMTCQSCVRNIEATVGGRPGVRAVRVDLAAARGWLEVAPELADQQLIDWVEEMGFEARLAAELQCRLAIENMSCQSCVRNIEGKVAAQPGVLGVKVDLEAKEGVITYNPQVTSPGTLEDFVNGIGKFRAAVKPPSDGSSTGPAQDKPDGRSDSPPRQALLSARTPGESPRSPPKPPRSPQSATRSPEKTPVSPGKSTRSAADELETCTVSIRGMTCASCVSAIEKHM...
AA_position 33
XM_037215152.1 - Pollicipes pollicipes - NCBI
PREDICTED: Lingula anatina copper-transporting ATPase 1-like (LOC106175926), transcript variant X5, mRNA. (4468 bp)
by RNAseq alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:106175926" CDS 4..4374 /gene="LOC106175926" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X5" /protein_id="XP_013413593.1" /db_xref="GeneID:106175926" /translation="MMSEAVISIQGMTCQSCVKNIEVNMAAFPGISTIEVSLENQEGVVSFDPTVTTAEKIAEGIDDMGFEAKVKSPGSSPQEVTIYIEGMTCQSCVKNIEGAISMRSGVKQIKVSLSQKQASIRYDPSQTNPRTLREHIDDMGFEAFLEKPKQTVNVKIGVEGMTCQSCVKNIEGNMSSKPGVRHIQVSLERKEANITYDPSVVTAQMLRDQINDMGFEATLPSNGSSTSFDEFHELAKTRSHADFGKCRLHIEGMTCQSCIKNIEGVIGEFPGVKTIKVTLETKSADVTFDSSIVTAQAVADRISDMGFDCNVADQQ...
AA_position 12
XM_013558139.2 - Lingula anatina - NCBI
Alternaria alternata Cu,Zn superoxide dismutase-like protein mRNA. (853 bp)
CDS 59..793 /locus_tag="CC77DRAFT_1017268" /codon_start=1 /product="Cu,Zn superoxide dismutase-like protein" /protein_id="XP_018389033.1" /db_xref="GeneID:29109965" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Altal1_1017268" /translation="MTVPSFETIFAVPMTCQSCINDIEGSLQQLGGINKVTANLKDQLVSIEGTAAPSAIVEAIQATGRDAILRGSGRSDSAAVCILESHAPHVENKVRGLVRMVEVAPSMTIIDLSIRGLSPGTYHATIRESGNISDGPESTGAIWEHHKAKQEGKPCRGVFGTVQVGKGGVGSVFLDKPIHIWEMIGRSIVVAKEQDGKFDKNDPDTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 59..757 /locus_tag="CC77DRAFT_1017268" /note="copper, zinc superoxide...
AA_position 14
XM_018524371.1 - Alternaria alternata - NCBI
Bipolaris oryzae ATCC 44560 uncharacterized protein (COCMIDRAFT_32444), partial mRNA. (735 bp)
db_xref="GeneID:19122106" CDS 1..735 /locus_tag="COCMIDRAFT_32444" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_007683176.1" /db_xref="GeneID:19122106" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Cocmi1_32444" /translation="MAVTPFETIFAVPMTCQSCINDIEGSLHQLSGINKVTANLEEQLVSIEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVSPGMTIVDLSIRGLSPGTYHATVRESGNISEGPESTGGIWELGQSQKATKPCRGIFGTVQVGKGGVGWVFLDKPIHIWEVIGRSIVVAREQDGKFDKNDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 22..699 /locus_tag="COCMIDRAFT_32444" /note="copper, zinc...
AA_position 14
XM_007684986.1 - Bipolaris oryzae ATCC 44560 - NCBI
Bipolaris zeicola 26-R-13 uncharacterized protein (COCCADRAFT_86552), partial mRNA. (735 bp)
db_xref="GeneID:19152180" CDS 1..735 /locus_tag="COCCADRAFT_86552" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_007708699.1" /db_xref="GeneID:19152180" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Cocca1_86552" /translation="MTVTAFETIFAVPMTCQSCINDIEGSLHQLSGINKVTANLKEQLVSVEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVSPGMTIVDLSIRGLSPGTYHATVRESGNISEGPESTGGIWELGQSQKETKACRGIFGTVQVGKGGVGSVFLDKPIHIWEVIGRSIVVAKEQDGKFDKNDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 22..699 /locus_tag="COCCADRAFT_86552" /note="copper, zinc...
AA_position 14
XM_007710509.1 - Bipolaris zeicola 26-R-13 - NCBI
Bipolaris maydis ATCC 48331 uncharacterized protein (COCC4DRAFT_196375), partial mRNA. (782 bp)
db_xref="GeneID:25841795" CDS 48..782 /locus_tag="COCC4DRAFT_196375" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_014079098.1" /db_xref="GeneID:25841795" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:CocheC4_1_196375" /translation="MTVTPFETIFAVPMTCQSCINDIEGSLHQLSGINKVTANLKEQLVSIEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVSPGMTIVDLSIRGLSPGTYHATVRESGNISEGPESTGGIWELGQSQKETKACRGIFGTVQVGKGGVGSVFLDKPIHIWEVIGRSIVVAREQDGKFDKKDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 69..746 /locus_tag="COCC4DRAFT_196375" /note="copper, zinc...
AA_position 14
XM_014223623.1 - Bipolaris maydis ATCC 48331 - NCBI
PREDICTED: Crassostrea virginica copper-transporting ATPase 1-like (LOC111122539), mRNA. (5350 bp)
protein was modified relative to its source genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: copper-transporting ATPase 1-like" /protein_id="XP_022320032.1" /db_xref="GeneID:111122539" /translation="MLGEETQEMEKVTDLHIEGMTCQSCIDKIQDHMAREPGVIHVQMFLEEKEAKITYSPTETSPPILAEQISDMGFPSKVKLVHPVRGDNCQDAIINVGGMTCQSCVKSIESKMLEVSGILGITVSLLKKQAYVQFNPGKISAESIASAIDDMGFEASVHSITRDKGLTTKIGVEGMTCQSCVNSIESAMRGKPGVREIKVSLSDKEAHIVYDPTLTSPGSLRDQIDDMGFEATLARESSIESEFDRLASRQSSTRSVQSELVCQIAVKGMTCQSCVKNIESNISPKPGVMSISVSLEKEMASVTYNPLVTNPTSIAGMIDDMGFEASVE...
AA_position 20
XM_022464324.1 - Crassostrea virginica (eastern oyster) - NCBI
PREDICTED: Dendronephthya gigantea copper chaperone for superoxide dismutase-like (LOC114528414), mRNA. (1715 bp)
alignments, including 2 samples with support for all annotated introns" /db_xref="GeneID:114528414" CDS 728..1531 /gene="LOC114528414" /codon_start=1 /product="copper chaperone for superoxide dismutase-like" /protein_id="XP_028405838.1" /db_xref="GeneID:114528414" /translation="MAGSEGNSLTKMEFAVQMTCQSCVLSIQAALESAKGVESFNINLHDEQVTVETNLPSGLIQQILEQTGRKAILRGHGATQDRSTFHIGAAVAIMSGENNIQGVIRFVQVDNKRCIIDGTIDELQPGAHGLHIHELGDISNGCESLGDHYNPNNCEHGGMFDEEKHIGDLGNIIADKKKRAQFRLESYDVKVWDVIGRSIVVSEHEDDLGRENNPQSKIDGNSGLRLACGIIARSAGLFQNTKKFCACTGMTLWEERDLKKEHPLSQL" misc_feature 764..1489 /gene="LOC114528414" /note="...
AA_position 18
XM_028550037.1 - Dendronephthya gigantea - NCBI
PREDICTED: Lingula anatina copper-transporting ATPase 1-like (LOC106175926), transcript variant X3, mRNA. (4498 bp)
by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:106175926" CDS 4..4404 /gene="LOC106175926" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X3" /protein_id="XP_013413576.1" /db_xref="GeneID:106175926" /translation="MMSEAVISIQGMTCQSCVKNIEVNMAAFPGISTIEVSLENQEGVVSFDPTVTTAEKIAEGIDDMGFEAKVKSPGSSPQEVTIYIEGMTCQSCVKNIEGAISMRSGVKQIKVSLSQKQASIRYDPSQTNPRTLREHIDDMGFEAFLEKPKQTVNVKIGVEGMTCQSCVKNIEGNMSSKPGVRHIQVSLERKEANITYDPSVVTAQMLRDQINDMGFEATLPSNGSSTSFDEFHELAKTRSHADFGKCRLHIEGMTCQSCIKNIEGVIGEFPGVKTIKVTLETKSADVTFDSSIVTAQAVADRISDMGFDCNVADQQD...
AA_position 12
XM_013558122.2 - Lingula anatina - NCBI
Bipolaris victoriae FI3 hypothetical protein partial mRNA. (735 bp)
db_xref="GeneID:26255451" CDS 1..735 /locus_tag="COCVIDRAFT_34417" /codon_start=1 /product="hypothetical protein" /protein_id="XP_014560482.1" /db_xref="GeneID:26255451" /db_xref="InterPro:IPR001424" /db_xref="InterPro:IPR006121" /db_xref="JGIDB:Cocvi1_34417" /translation="MTVTAFETIFAVPMTCQSCINDIEGSLHQLSGINKVTANLKEQLVSVEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVSPGMTIVDLSIRGLSPGTYHATVRESGNISEGPESTGGIWELGQSQKETKACRGIFGTVQVGKGGVGSVFLDKPMHIWEVIGRSIVVAKEQDGKFDKNDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML" misc_feature 22..699 /locus_tag="COCVIDRAFT_34417" /note="copper, zinc...
AA_position 14
XM_014704996.1 - Bipolaris victoriae FI3 - NCBI
Entamoeba invadens IP1 hypothetical protein (EIN_024290) mRNA, complete cds. (729 bp)
country="USA" /collection_date="1952" gene 729 /locus_tag="EIN_024290" /db_xref="GeneID:14889363" CDS 1..729 /locus_tag="EIN_024290" /note="encoded by transcript EIN_024290A" /codon_start=1 /product="hypothetical protein" /protein_id="XP_004257471.1" /db_xref="GeneID:14889363" /translation="MTCQSCRTFDPHCATCSPDFSRKCVTCDSGYYPSNGICVACSTTCQQNKCNTANGMCMLCIDNYVVTSPISTNCIMCSARNKDCVTCATNFTQKCVKCKNGKFASNGKCIDCESTCGGTCDGVSGYCTGCTATYVPSNTNLSMCILCQAFDSNCESCVTGERKCTKCSTPNMYPDDTSHMCVSCSTTCGGSCDAINGICTTCQDNYVFQSTKSRVCEQCSTFDTHCNKCSSAFERRCVMCNT" ORIGIN // REFERENCE 1 (bases 1 to 729) AUTHORS Zafar,N., Inman,J...
AA_position 1
XM_004257423.1 - Entamoeba invadens IP1 - NCBI
PREDICTED: Centruroides sculpturatus copper chaperone for superoxide dismutase-like (LOC111613636), transcript variant X2, mRNA. (956 bp)
RNAseq alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:111613636" CDS 110..841 /gene="LOC111613636" /codon_start=1 /product="copper chaperone for superoxide dismutase-like isoform X2" /protein_id="XP_023210758.1" /db_xref="GeneID:111613636" /translation="MTCQSCVNSVERALRNLDVKKVEIDLNNQQVVVETSLPYSEILHHIEQTGRRAVLKGYGSISGGAAVAEIFGKNGIMGIVRFAHINDSSCIIDGTVDGLKGEHGLHICEFGDLTNDCENVGGHYNPSNKMHGSPEDNERHYGDLGNIRADKNGRAVFRKEDSTVKVWEIIGRSLVITEHKDDLGRGNNERSKIDGNSGQKLACGIIARSAGLFQNPKRICLCDGVSVWDEREKPVAGESRAKY" misc_feature 110..796 /gene="LOC111613636" /note="copper,...
AA_position 1
XM_023354990.1 - Centruroides sculpturatus (bark scorpion) - NCBI
PREDICTED: Bubalus carabanensis copper chaperone for superoxide dismutase (CCS), transcript variant X4, mRNA. (1054 bp)
automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:129652284" CDS 138..884 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X4" /protein_id="XP_055436704.1" /db_xref="GeneID:129652284" /translation="MASDSEDRGTACTLEFAVQMTCQSCVDAVRTSLQGIAGIQSVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILGGPGPVQGVVRFLQLTPERCLIEGTIDGLQPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSERVWDVIGRSLVVDEGEDDLGRGGHPLSRITGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGQGRKEPAQPPAHL" polyA_site 1054 /gene="CCS" /experiment="COORDINATES: polyA evidence...
AA_position 20
XM_055580729.1 - Bubalus carabanensis (carabao) - NCBI
PREDICTED: Pomacea canaliculata copper chaperone for superoxide dismutase-like (LOC112569934), mRNA. (1336 bp)
protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: copper chaperone for superoxide dismutase-like" /protein_id="XP_025103819.1" /db_xref="GeneID:112569934" /translation="MAEQTRMEFAVQMTCQSCADAVYKALSGKPGVQSVDIKLQSEQVIVKTSLPTDVIKSMIESTGRVAVLQGFGGTSGLHLGAAVAAMDVGAKEIRGVVRMVQTSEDSCLFEGTVDGLPPGHHSLCVHEKGDISDGCTSCGDVFGAGETEKAKGILQELEVGESGHATFQFSNKQLKVWDLIGRSLIIHKGSQMNSVNNRLVCGIIARSAGLFENSKRLCTCDGVSIWEERNRPVAGEGRRQESKI" misc_feature 64..732 /gene="LOC112569934" /note="copper, zinc...
AA_position 13
XM_025248034.1 - Pomacea canaliculata - NCBI
Parastagonospora nodorum SN15 hypothetical protein (SNOG_08335), mRNA. (906 bp)
to RNA sequence, EST (same species):INSD:DR044841.1" /inference="similar to RNA sequence, EST (same species):INSD:DR045039.1" /note="gene prediction version 2" /codon_start=1 /product="hypothetical protein" /protein_id="XP_001798655.1" /db_xref="GeneID:5975553" /translation="MTVPVFETVFAVPMTCQSCINDIEGSLQQLSGIHKVSANLKDQLVSVEGTAPPSAIVEAIQSTGRDAILRGSGKSDSAAVCILESHAAHIENKVRGLARMVEVAPGMTIIDLSIRGLSPGTYHATVRESGNISEGPETAGAIWEASKAKNEGQPCRGIFGTVEVGKGGVGAVFLDKPIHIWEMIGRSIIVAKQQDGKFDKNDPDTLVGVIARSAGVWDNDKTVCSCSGKTVWQERDEQRDRGML" misc_feature 43..741 /locus_tag="SNOG_08335" /note="copper, zinc superoxide...
AA_position 14
XM_001798603.1 - Parastagonospora nodorum SN15 - NCBI
PREDICTED: Cervus elaphus copper chaperone for superoxide dismutase (CCS), transcript variant X6, mRNA. (2929 bp)
alignments, including 14 samples with support for all annotated introns" /db_xref="GeneID:122708993" CDS 117..887 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X5" /protein_id="XP_043781926.1" /db_xref="GeneID:122708993" /translation="MASDPEDRGTACTLEFAVQMTCQSCVDAVRTSLQGIAGVQSVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILGGPGPVQGVVRFLQLTPERCLIEGTIDGLQPGLHGLHIHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSERPGEGDTRNSMVAAQPEHLCRSLREALGTQSKLQIQSEGHRQWERASQRRPPWVLARDLSPVPREPFPRAAHSTAAACPQSQREKASKTQANSF" misc_feature 156..>620 /gene="CCS" /note="copper, zinc superoxide...
AA_position 20
XM_043925991.1 - Cervus elaphus (red deer) - NCBI
PREDICTED: Canis lupus familiaris copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (1062 bp)
with support for all annotated introns" /db_xref="GeneID:442988" /db_xref="VGNC:VGNC:38919" CDS 133..900 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X1" /protein_id="XP_038279319.1" /db_xref="GeneID:442988" /db_xref="VGNC:VGNC:38919" /translation="MTCQSCVDAVRTSLQGVAGIQSVKVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQFGDLTGNCNSCGDHFNPDGASHGGPKDSDRHRGDLGNVHAGTDGRAIFRIEDEQLKVWDVIGRSLVIDEGEDDLGLGGHPLSKVTGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKEPAKPPAHL" misc_feature 133..834 /gene="CCS" /note="copper,...
AA_position 1
XM_038423391.1 - Canis lupus familiaris (dog) - NCBI
PREDICTED: Canis lupus familiaris copper chaperone for superoxide dismutase (CCS), transcript variant X1, mRNA. (1027 bp)
with support for all annotated introns" /db_xref="GeneID:442988" /db_xref="VGNC:VGNC:38919" CDS 98..865 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X1" /protein_id="XP_038279318.1" /db_xref="GeneID:442988" /db_xref="VGNC:VGNC:38919" /translation="MTCQSCVDAVRTSLQGVAGIQSVKVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQFGDLTGNCNSCGDHFNPDGASHGGPKDSDRHRGDLGNVHAGTDGRAIFRIEDEQLKVWDVIGRSLVIDEGEDDLGLGGHPLSKVTGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKEPAKPPAHL" misc_feature 98..799 /gene="CCS" /note="copper, zinc...
AA_position 1
XM_038423390.1 - Canis lupus familiaris (dog) - NCBI
PREDICTED: Chlorocebus sabaeus copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (1122 bp)
feature by RNAseq alignments, including 40 samples with support for all annotated introns" /db_xref="GeneID:103221941" CDS 193..960 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_037854948.1" /db_xref="GeneID:103221941" /translation="MTCQSCVDAVRKSLQGVAGVQDVEVHLENQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSDQLQNLGAAVAILGGPGTVQGVVRFLQLSPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGDHFNPDGASHGGPQDSDRHRGDLGNVHADADGCAIFRMEDEKLKVWDVIGRSLVIDEGEDDLGRGGHPLSKITGNSGQRLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGKGRKESVQPPAHL" misc_feature 193..894 /gene="CCS" /note="copper,...
AA_position 1
XM_037999020.1 - Chlorocebus sabaeus (Cercopithecus sabaeus) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/aa%3aMTCQSC
lang : en | div : | spe : | query_string : aa:MTCQSC | format : html | download : 

0.000 | 0.000 | search_start;
0.080 | 0.080 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:MTCQSC)?to=0&format=json
0.115 | 0.035 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:MTCQSC)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.120 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]