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2024-05-19 08:22:24, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_040934160             880 bp    mRNA    linear   PLN 20-APR-2021
DEFINITION  Cucurbitaria berberidis CBS 394.84 superoxide dismutase copper
            chaperone-like protein (K460DRAFT_370416), mRNA.
ACCESSION   XM_040934160
VERSION     XM_040934160.1
DBLINK      BioProject: PRJNA722002
            BioSample: SAMN02691713
KEYWORDS    RefSeq.
SOURCE      Cucurbitaria berberidis CBS 394.84
  ORGANISM  Cucurbitaria berberidis CBS 394.84
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae;
            Cucurbitariaceae; Cucurbitaria.
REFERENCE   1  (bases 1 to 880)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2021) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   2  (bases 1 to 880)
  AUTHORS   Haridas,S., Albert,R., Binder,M., Bloem,J., Labutti,K., Salamov,A.,
            Andreopoulos,B., Baker,S.E., Barry,K., Bills,G., Bluhm,B.H.,
            Cannon,C., Castanera,R., Culley,D.E., Daum,C., Ezra,D.,
            Gonzalez,J.B., Henrissat,B., Kuo,A., Liang,C., Lipzen,A.,
            Lutzoni,F., Magnuson,J., Mondo,S., Nolan,M., Ohm,R., Pangilinan,J.,
            Park,H.-J., Ramirez,L., Alfaro,M., Sun,H., Tritt,A., Yoshinaga,Y.,
            Zwiers,L.-H., Turgeon,B.G., Goodwin,S.B., Spatafora,J.W.,
            Crous,P.W. and Grigoriev,I.V.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2020) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_024468939).
            
            ##Metadata-START##
            Organism Display Name :: Cucurbitaria berberidis CBS 394.84
            GOLD Stamp ID         :: Gp0019330
            ##Metadata-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Cucurbitaria berberidis CBS 394.84"
                     /mol_type="mRNA"
                     /strain="CBS 394.84"
                     /culture_collection="CBS:394.84"
                     /db_xref="taxon:1168544"
                     /chromosome="Unknown"
     gene            1..880
                     /locus_tag="K460DRAFT_370416"
                     /db_xref="GeneID:63851411"
     CDS             59..793
                     /locus_tag="K460DRAFT_370416"
                     /codon_start=1
                     /product="superoxide dismutase copper chaperone-like
                     protein"
                     /protein_id="XP_040785013.1"
                     /db_xref="GeneID:63851411"
                     /db_xref="InterPro:IPR001424"
                     /db_xref="InterPro:IPR006121"
                     /db_xref="JGIDB:Cucbe1_370416"
                     /translation="
MTVPAFETTFAVPMTCQSCVKDIEGSLHQLSGINKITANLEHQLVSVEGTVAPSAIVEAIQATGRDAILRGSGKSESAAVCILESHASHVENKVRGLARMVEVAPGITVVDLSIRGLSPGTYHATVRESGDISEGPESTGGIWEALTAKKESKPSRGIFGTVEVGKGGDGAVFLDKPIQIWEMIGRSIVVAREQDGKFDKNDPDTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML"
     misc_feature    59..757
                     /locus_tag="K460DRAFT_370416"
                     /note="copper, zinc superoxide dismutase; Region:
                     PLN02957"
                     /db_xref="CDD:215516"
ORIGIN      
ctacgaaaacacctccccaccatattgaaaatctcagcgcgaatacacaacttgaacgatgacagtcccagcatttgaaactaccttcgcggtgcccatgacctgccaatcatgtgttaaggacattgaaggctcgctacatcaattgagtggcatcaacaaaatcactgccaacttggaacatcaactagtctcggttgaaggcacagttgcaccttcggctattgtagaagctatacaagctacgggccgtgatgctattctacgtggaagtggaaagtccgaaagtgcagcagtatgtatcctagaatcgcacgcttctcatgtagagaacaaggtacgcggattggcgcgcatggtcgaagttgctcccggtatcacggtcgtcgatctgagtataagaggactatctcctggaacctaccatgccacagttcgagaatctggagacatatctgagggtcctgaatctactggtggcatctgggaagctttgaccgcaaaaaaagagagcaaaccttctcgaggcatctttggcacagtcgaagtagggaaggggggcgatggtgctgtcttccttgacaaacctattcagatctgggagatgatcggccgcagcatagtggttgcaagagaacaggatggaaagttcgataagaatgatccggatacgctagtgggcgtcattgcacgcagcgctggcgtctgggacaatgacaaaaccgtgtgctcgtgctctggaaagacagtgtggcaggagagagaggaacagcgggaccgtggtatgctatgagcactatgatatgccaagatagatgaagctctccaagaagaatgaaatgccatccaactgctgtattcggtggccaggtgataacgc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]