LOCUS       XM_025248034            1336 bp    mRNA    linear   INV 07-JUN-2018
DEFINITION  PREDICTED: Pomacea canaliculata copper chaperone for superoxide
            dismutase-like (LOC112569934), mRNA.
ACCESSION   XM_025248034
VERSION     XM_025248034.1
DBLINK      BioProject: PRJNA472795
KEYWORDS    RefSeq; corrected model.
SOURCE      Pomacea canaliculata
  ORGANISM  Pomacea canaliculata
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
            Caenogastropoda; Architaenioglossa; Ampullarioidea; Ampullariidae;
            Pomacea.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_037597.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pomacea canaliculata Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                PZQS01000008.1     28525749-28525808
            61-133              PZQS01000008.1     28526203-28526275
            134-268             PZQS01000008.1     28527712-28527846
            269-452             PZQS01000008.1     28528498-28528681
            453-489             PZQS01000008.1     28529372-28529408
            490-635             PZQS01000008.1     28532342-28532487
            636-672             PZQS01000008.1     28532990-28533026
            673-1336            PZQS01000008.1     28533028-28533691
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Pomacea canaliculata"
                     /mol_type="mRNA"
                     /isolate="SZHN2017"
                     /isolation_source="paddy field"
                     /db_xref="taxon:400727"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /country="China: Guangdong province, Shenzhen"
                     /collection_date="2016-09-25"
                     /collected_by="Conghui Li"
                     /linkage_group="LG8"
     gene            1..1336
                     /gene="LOC112569934"
                     /note="The sequence of the model RefSeq transcript was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 96% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     49 samples with support for all annotated introns"
                     /db_xref="GeneID:112569934"
     CDS             43..777
                     /gene="LOC112569934"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: copper chaperone for
                     superoxide dismutase-like"
                     /protein_id="XP_025103819.1"
                     /db_xref="GeneID:112569934"
                     /translation="

MAEQTRMEFAVQMTCQSCADAVYKALSGKPGVQSVDIKLQSEQVIVKTSLPTDVIKSMIESTGRVAVLQGFGGTSGLHLGAAVAAMDVGAKEIRGVVRMVQTSEDSCLFEGTVDGLPPGHHSLCVHEKGDISDGCTSCGDVFGAGETEKAKGILQELEVGESGHATFQFSNKQLKVWDLIGRSLIIHKGSQMNSVNNRLVCGIIARSAGLFENSKRLCTCDGVSIWEERNRPVAGEGRRQESKI"

     misc_feature    64..732
                     /gene="LOC112569934"
                     /note="copper, zinc superoxide dismutase; Region:
                     PLN02957"
                     /db_xref="CDD:215516"
ORIGIN      

ccttgtgacgttgtgcccacactttgatgacgtagagacaatatggcggaacaaaccagaatggaatttgctgttcagatgacttgtcagtcctgtgcagatgcagtttacaaggcacttagtggaaagccaggtgtgcagtctgtggacatcaaactacagtcggaacaggtcattgtaaaaacttctttgccgacagatgtaattaagtccatgattgaatcgacaggccgagtggcagttttgcagggatttgggggaacgtctggtctgcacctaggagcagcagtggctgctatggatgttggtgccaaggaaatacgaggtgttgtgcgaatggtacagacctcagaagacagttgtttatttgaaggaacggtagatggcctcccacctggtcaccattctctgtgtgtgcatgagaaaggagacatatctgatggttgtacaagctgtggggatgtgtttggtgcaggagagactgaaaaggcaaaaggaatactgcaggaacttgaggtgggggaaagcggtcatgccacatttcaatttagtaacaaacagctgaaggtctgggacctgattggtcgctcccttattattcataagggttcacagatgaacagtgttaacaacagacttgtgtgtggcatcattgcacgctcagcaggactgtttgagaattccaaacgcctttgtacctgtgatggcgttagcatctgggaagagagaaatagacctgtagctggagaaggccggaggcaggaatcaaagatttagtcatgtgccgcagtttttgcctttgaggaccagtgcttgaagtcattcctgcagcctggattaacttggcggctccaggtgtctcattgacacatgacctttgagctcatcagtactggattaacatgacggcttcaggtgtggaatggacctttgagctctgtctattgatgttacagttgttccactggatgcattatgttaaacatgaatggttaagcagataattttctatgcttttgaggcaccaagtctgaaatcagacctaaagcaagaatatatgttacaaagatacgcaatgtggttgatttgtttgccaaagtaactgcagtaattttgttaaatgaaaattcctttgtttgaaagttcttcagacagtgaagttcatttgttttctttgcttattcagaaaaataaatgccttaaatttgtgcttacaatgataaaggccttacaatttgtgcataaaataccagcaagttggaaacgacattcatgtagaacattgttatgtatagcagaaaagacgactcagaaatataaagttctgcgcaaggta

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