LOCUS       XM_004352502             699 bp    mRNA    linear   INV 07-OCT-2021
DEFINITION  Acanthamoeba castellanii str. Neff copper/zinc superoxide dismutase
            (ACA1_361140), partial mRNA.
ACCESSION   XM_004352502
VERSION     XM_004352502.1
DBLINK      BioProject: PRJNA193615
            BioSample: SAMN02953809
KEYWORDS    RefSeq.
SOURCE      Acanthamoeba castellanii str. Neff
  ORGANISM  Acanthamoeba castellanii str. Neff
            Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida;
            Acanthamoebidae; Acanthamoeba.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Clarke,M., Lohan,A.J., Liu,B., Lagkouvardos,I., Roy,S., Zafar,N.,
            Bertelli,C., Schilde,C., Kianianmomeni,A., Burglin,T.R., Frech,C.,
            Turcotte,B., Kopec,K.O., Synnott,J.M., Choo,C., Paponov,I.,
            Finkler,A., Soon Heng Tan,C., Hutchins,A.P., Weinmeier,T.,
            Rattei,T., Chu,J.S., Gimenez,G., Irimia,M., Rigden,D.J.,
            Fitzpatrick,D.A., Lorenzo-Morales,J., Bateman,A., Chiu,C.H.,
            Tang,P., Hegemann,P., Fromm,H., Raoult,D., Greub,G.,
            Miranda-Saavedra,D., Chen,N., Nash,P., Ginger,M.L., Horn,M.,
            Schaap,P., Caler,L. and Loftus,B.
  TITLE     Genome of Acanthamoeba castellanii highlights extensive lateral
            gene transfer and early evolution of tyrosine kinase signaling
  JOURNAL   Genome Biol. 14 (2), R11 (2013)
   PUBMED   23375108
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 699)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2021) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 699)
  AUTHORS   Clarke,M., Zafar,N., Loftus,B. and Caler,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2012) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_004457643).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Acanthamoeba castellanii str. Neff"
                     /mol_type="mRNA"
                     /strain="Neff"
                     /isolation_source="pond"
                     /culture_collection="ATCC:30010"
                     /db_xref="taxon:1257118"
                     /chromosome="Unknown"
                     /country="USA"
                     /collection_date="1960"
     gene            <1..>699
                     /locus_tag="ACA1_361140"
                     /db_xref="GeneID:14924048"
     CDS             1..699
                     /locus_tag="ACA1_361140"
                     /note="encoded by transcript ACA1_361140A"
                     /codon_start=1
                     /product="copper/zinc superoxide dismutase"
                     /protein_id="XP_004352554.1"
                     /db_xref="GeneID:14924048"
                     /translation="

MEGTQGSEKLRTGVKAQLNVEMTCQSCVEGITTALKAVPGVTVLDVDLDRGEVELLTQRVPVEKLLRILRETGRSASLQGLGGEGEQLGSAVSQLEPADGSKEGPHATVALDRCLVEAILDGFPPGEYDLAVHEFGDLSDAERSVGDVFGRHPGYADKPAGEIGRIAVGQNGEGTIMADNKQLKVWDIIGRSVVARPASPGGARGVAFGVIARSAGVRENPKKICRCDDPDF"

     misc_feature    58..684
                     /locus_tag="ACA1_361140"
                     /note="copper, zinc superoxide dismutase; Region:
                     PLN02957"
                     /db_xref="CDD:215516"
ORIGIN      

atggagggaacacaaggaagcgaaaagctgcgcactggcgtgaaggcacagctcaacgtggagatgacctgccagagctgcgtggagggcatcacgacggccttgaaggccgttcccggcgtgacggtcctcgacgtcgacctcgaccgaggcgaggtcgagctgttgacgcagcgcgtgccggtggagaagctgctgcgaatcctgcgtgagaccggccgatcggcgtccctccagggcctgggcggtgagggcgagcagttgggatcggcggtgagccagctggagccggccgacgggagcaaggaaggcccgcacgccacggtggccctcgaccgatgcctcgtcgaagccatcctcgacggcttccctcccggcgagtacgacctggcggtgcacgagttcggcgacctgtcagacgcagagcgctcggtgggcgacgtgttcgggcgacaccccggctacgccgacaagcccgccggtgagatcggacgcatcgcagtcggccaaaacggagagggcacgatcatggcggacaacaagcagctcaaggtgtgggacatcatcggacggagcgtggtggccaggcccgccagccccggcggcgcgcggggcgtcgcgttcggcgtcatcgcccgaagcgccggcgtgcgagagaaccccaagaagatctgccggtgtgacgacccagacttttga

//