GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2024-05-05 18:53:15, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Pecten maximus spore wall protein 2-like (LOC117322756), mRNA. (1776 bp)
gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:117322756" CDS 1..1776 /gene="LOC117322756" /codon_start=1 /product="spore wall protein 2-like" /protein_id="XP_033733585.1" /db_xref="GeneID:117322756" /translation="MHNDEFTFKATTCRANKDKTGPKIDKTGTKIDETAPKIDKTGPKIDKTGTNNGITGANKDKTGTKIDKTGTKIDKTGTKIDKTGAKKDKTGPKIDKTETKIDKTGPKIDKTGPKIDKTGPKIDKTGTHNVITGANKDKTGTNNGANKDKTGANKDKTGTNNGITEESKDKTGANKDKTGANKVITGANKGITGANKDKTGANNGITGANKDKTGTNNGITGANKDKTGPKIDKTETKIDKTRPKIDKTGPKIDKTGPKIDKTGTHNVITGANKDKTGTNNGITGANKDKTGTKIDKTGTKIDKTGTHNVITGANKDKTGTNKDKTGAN...
AA_position 25
XM_033877694.1 - Pecten maximus - NCBI
Plasmodium vivax tryptophan-rich antigen (Pv-fam-a) (PVX_090270), partial mRNA. (1071 bp)
gene 1071 /locus_tag="PVX_090270" /db_xref="GeneID:5474437" CDS 1..1071 /locus_tag="PVX_090270" /note="encoded by transcript PVX_090270A" /codon_start=1 /product="tryptophan-rich antigen (Pv-fam-a)" /protein_id="XP_001615146.1" /db_xref="GeneID:5474437" /translation="MAKKTVTKVAKKKVTKVAEKTGTKVADKTGTKVADKTGTKVADKTGTKVAEKTGTKVADKTGTKVAEKTGTNISQKEDEKGPPKEDTQGTQKADAKAIQQADAQVSEKWKKKEWKEWIKKAESDLDIFNALMDNEKEKKWYSEKEKEWNKWIKGVEKKWMHYNKNIYVEYRSLVFWVGLKWVESQWEKWILSDGLEFLVMDWKKWIKENKSNFDEWLKSEWDTWTNSQMEEWKSSNWKLNEDKRWEMWENDKKWIKWLYLKDWINCSKWKKRIQKESKEWLRWTKLKEEMYKNKYGDKWKEWRTDKSIVYDDWKDDLAKRMIKKKQWQVWLK...
AA_position 27
XM_001615096.1 - Plasmodium vivax (malaria parasite P. vivax) - NCBI
PREDICTED: Acyrthosiphon pisum uncharacterized LOC100570895 (LOC100570895), mRNA. (653 bp)
alignments, including 47 samples with support for all annotated introns" /db_xref="GeneID:100570895" CDS 116..523 /gene="LOC100570895" /codon_start=1 /product="uncharacterized protein LOC100570895" /protein_id="XP_003245441.1" /db_xref="GeneID:100570895" /translation="MISTQIFISAIVLLSVVQYITCLDKTGTTVGATKPNKDAYIDINKSESPSYITSLDKTGTTVGASTATKPDKDAYIGINKSESPSEEEAMMNEEIPEKKSMASRFCNLITKPISVFWEPIQGALSSSLKTAVKLF" ORIGIN //...
AA_position 24
XM_003245393.4 - Acyrthosiphon pisum (pea aphid) - NCBI
Trametes versicolor FP-101664 SS1 pheromone (TRAVEDRAFT_184727), partial mRNA. (132 bp)
locus_tag="TRAVEDRAFT_184727" /db_xref="GeneID:19411702" CDS 1..132 /locus_tag="TRAVEDRAFT_184727" /codon_start=1 /product="pheromone" /protein_id="XP_008040855.1" /db_xref="GeneID:19411702" /db_xref="InterPro:IPR012597" /db_xref="JGIDB:Trave1_184727" /translation="MDAFFTIAPAVPETSAEAQPLEDILVECDKTGTSGNKGSCIIA" ORIGIN // REFERENCE 1 (bases 1 to 132) AUTHORS Floudas,D., Binder,M., Riley,R., Barry,K., Blanchette,R.A., Henrissat,B., Martinez,A.T., Otillar,R., Spatafora,J.W., Yadav,J.S., Aerts,A., Benoit,I., Boyd,A., Carlson,A., Copeland,A., Coutinho,P.M., de Vries,R.P., Ferreira,P., Findley,K.,...
AA_position 29
XM_008042664.1 - Trametes versicolor FP-101664 SS1 - NCBI
PREDICTED: Melitaea cinxia serine-rich adhesin for platelets-like (LOC123666088), mRNA. (4758 bp)
TTVLSSEQSSDQTATSSNDQTTTVSGGEQSTDQTSTAVGGKQSSDQTTTSSSNQTTTVLSSEQSSDQTATSSNDQTTTVSGGEQSTDQTSTAVGGKQSSDQTTTSSSNQTTTVLSSEQSSDQTATSSNDQTTTVSGGEQSSDQSITAVGGKQSSDQTATSSNDQTTTVSDGEQSSDQTTTAFSGKQSSVQTTTSSSNQTTTVLSSEQSSDQTATSSNDQTTTVSSGEQSSDQTITAVGGKQSSDQTATSSNDQTTTVSDGEQPSDQTTTAVSGKQSSVQTTTSSSNQTTTVLSGEQSSDKTGTSSDDRTTIAPGGEQSSDQTTTATSSSDQTTSSSSNQTTTILSSEQSSDQTATSSNDQTTTLSGGEQSSDQTITAVGGKQSSDQTATSSNDQTTTVSDGEQSSDQTTTVFSGKQSSVQTTTSSSNQTTTVLSGEQSSDKTGTSSDDQTTTVSGGEQSSDQTITAVGGKQSSDQTATSSNDQTTTVSDGEQSSDQTTTAVSGKQSSVQTTTSSSNQTNTVLSGEQSSDKTGTSSNDQTTTVSGGEQSSDQTITAVGGKQSSDQTATSSNDQTTTVSDGEQPSDQTTTAVSGKQSSVQTT...
AA_position 410
XM_045600296.1 - Melitaea cinxia (Glanville fritillary) - NCBI
PREDICTED: Megalops cyprinoides uncharacterized G-patch domain protein DDB_G0278987-like (LOC118782936), mRNA. (869 bp)
feature by RNAseq alignments" /db_xref="GeneID:118782936" CDS 60..869 /gene="LOC118782936" /codon_start=1 /product="uncharacterized G-patch domain protein DDB_G0278987-like" /protein_id="XP_036392456.1" /db_xref="GeneID:118782936" /translation="MDFTRPKAGGLETDRTAQTIRDGEGVVSGPQDGARDGGASDGYKPSGVSDKTGTSSELKTSGGIGDKTGTQNKSDVIGKKMEPAYSCDSSLSSSDSDDEGYVKEKKKKKKKKKKKHKKKPMSDGKCMFLQVWMCGKTSCAIPVYSLPFSLLQDDDSEDEEKYGEKKKKKKKKKKEMKKKEVKDGQDGISDIVIGEGGIELISLEDLSGEERKKEKAKKKKKKKKKKDSGDDKTNC" ORIGIN //...
AA_position 50
XM_036536563.1 - Megalops cyprinoides (Indo-Pacific tarpon) - NCBI
Trichoderma citrinoviride hypothetical protein (BBK36DRAFT_38962), partial mRNA. (150 bp)
Unknown" gene 150 /locus_tag="BBK36DRAFT_38962" /db_xref="GeneID:36606171" CDS 150 /locus_tag="BBK36DRAFT_38962" /codon_start=1 /product="hypothetical protein" /protein_id="XP_024747077.1" /db_xref="GeneID:36606171" /db_xref="JGIDB:Trici4_38962" /translation="AATAVSFFRTDYVLTSIESCGTMGNCTTTCSDKTGTLTQNSMTVILGALG" misc_feature 150 /locus_tag="BBK36DRAFT_38962" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN // REFERENCE 1 (bases 1 to 150) AUTHORS Atanasova,L., Chenthamara,K., Zhang,J., Grujic,M., Henrissat,B., Kuo,A., Aerts,A., Salamov,A.,...
AA_position 32
XM_024898053.1 - Trichoderma citrinoviride (Hypocrea schweinitzii) - NCBI
Suillus fuscotomentosus uncharacterized protein (F5891DRAFT_931077), partial mRNA. (183 bp)
db_xref="GeneID:64668256" CDS 183 /locus_tag="F5891DRAFT_931077" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_041217891.1" /db_xref="GeneID:64668256" /db_xref="InterPro:IPR008250" /db_xref="JGIDB:Suifus1_931077" /translation="VAVPEGLPLAVTLALAFATKRMTKENLLVRVLGSCETMANSSIICTDKTGTLTRNVISVVA" misc_feature 183 /locus_tag="F5891DRAFT_931077" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN // REFERENCE 1 (bases 1 to 183) AUTHORS Lofgren,L.A., Nguyen,N.H., Vilgalys,R., Ruytinx,J., Liao,H.L., Branco,S., Kuo,A., LaButti,K., Lipzen...
AA_position 47
XM_041373958.1 - Suillus fuscotomentosus - NCBI
Suillus fuscotomentosus uncharacterized protein (F5891DRAFT_929519), partial mRNA. (183 bp)
db_xref="GeneID:64668227" CDS 183 /locus_tag="F5891DRAFT_929519" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_041226862.1" /db_xref="GeneID:64668227" /db_xref="InterPro:IPR008250" /db_xref="JGIDB:Suifus1_929519" /translation="VAVPEGLPLAVTLALAFATKRMTKENLLVRVLGSCETMANSSIICTDKTGTLTRNVISVVA" misc_feature 183 /locus_tag="F5891DRAFT_929519" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN // REFERENCE 1 (bases 1 to 183) AUTHORS Lofgren,L.A., Nguyen,N.H., Vilgalys,R., Ruytinx,J., Liao,H.L., Branco,S., Kuo,A., LaButti,K., Lipzen...
AA_position 47
XM_041373929.1 - Suillus fuscotomentosus - NCBI
Trichoderma virens Gv29-8 uncharacterized protein (TRIVIDRAFT_27606), partial mRNA. (195 bp)
locus_tag="TRIVIDRAFT_27606" /db_xref="GeneID:25792572" CDS 195 /locus_tag="TRIVIDRAFT_27606" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_013960704.1" /db_xref="GeneID:25792572" /db_xref="JGIDB:TriviGv29_8_2_27606" /translation="VAVLEGLPPAVTLDLAFTTTRMLRDANLVRHLKPCEVMGNATTVCSDKTGTLTQNKMQVVAGAVG" misc_feature 195 /locus_tag="TRIVIDRAFT_27606" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN // REFERENCE 1 (bases 1 to 195) AUTHORS Kubicek,C.P., Herrera-Estrella,A., Seidl-Seiboth,V., Martinez,D.A., Druzhinina,I.S., Thon,M...
AA_position 47
XM_014105229.1 - Trichoderma virens Gv29-8 - NCBI
Suillus fuscotomentosus uncharacterized protein (F5891DRAFT_950546), partial mRNA. (225 bp)
AA_position 42
XM_041374976.1 - Suillus fuscotomentosus - NCBI
PREDICTED: Camellia sinensis protein ENHANCED DOWNY MILDEW 2-like (LOC114301252), transcript variant X3, mRNA. (1561 bp)
including 17 samples with support for all annotated introns" /db_xref="GeneID:114301252" CDS 457..681 /gene="LOC114301252" /codon_start=1 /product="protein ENHANCED DOWNY MILDEW 2-like isoform X3" /protein_id="XP_028101982.1" /db_xref="GeneID:114301252" /translation="MIVDVLHFYVQDGDMKKLDKTGTRCSYKNYDVLQAKNDFNFEDRDWMTVHPKEFPTGSQLCMHLEYHLSSHGKK" ORIGIN //...
AA_position 19
XM_028246181.1 - Camellia sinensis - NCBI
Gloeophyllum trabeum ATCC 11539 uncharacterized protein (GLOTRDRAFT_48993), partial mRNA. (225 bp)
tag="GLOTRDRAFT_48993" /db_xref="GeneID:19306618" CDS 1..225 /locus_tag="GLOTRDRAFT_48993" /note="predicted protein" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_007870160.1" /db_xref="GeneID:19306618" /db_xref="JGIDB:Glotr1_1_48993" /translation="MEGHKKHFLTGMVYHGEYHFNCRFIDKTGTIWYNDGISTGRQCVIEGTLSNTDMTDLTKCKGKDISLVIYARRY" ORIGIN // REFERENCE 1 (bases 1 to 225) AUTHORS Floudas,D., Binder,M., Riley,R., Barry,K., Blanchette,R.A., Henrissat,B., Martinez,A.T., Otillar,R., Spatafora,J.W., Yadav,J.S., Aerts,A., Benoit,I., Boyd,A., Carlson,A., Copeland,A., Coutinho,P.M., de Vries,...
AA_position 26
XM_007871969.1 - Gloeophyllum trabeum ATCC 11539 - NCBI
PREDICTED: Glycine max plasma membrane ATPase 2-like (LOC102660489), mRNA. (282 bp)
feature by RNAseq alignments, including 89 samples with support for all annotated introns" /db_xref="GeneID:102660489" CDS 49..282 /gene="LOC102660489" /codon_start=1 /product="plasma membrane ATPase 2-like" /protein_id="XP_006602560.1" /db_xref="GeneID:102660489" /translation="MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADTVVLMAAQASRLENQDAIDTAIVGMLADPKEVSH" misc_feature 270 /gene="LOC102660489" /note="plasma-membrane proton-efflux P-type ATPase; Region: ATPase-IIIA_H; TIGR01647" /db_xref="CDD:273731" ORIGIN //...
AA_position 16
XM_006602497.2 - Glycine max (soybean) - NCBI
PREDICTED: Glycine soja plasma membrane ATPase 2-like (LOC114397259), mRNA. (263 bp)
feature by RNAseq alignments, including 249 samples with support for all annotated introns" /db_xref="GeneID:114397259" CDS 30..263 /gene="LOC114397259" /codon_start=1 /product="plasma membrane ATPase 2-like" /protein_id="XP_028215150.1" /db_xref="GeneID:114397259" /translation="MTTIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADTVVLMAAQASRLENQDAIDTAIVGMLADPKEVSH" misc_feature 251 /gene="LOC114397259" /note="plasma-membrane proton-efflux P-type ATPase; Region: ATPase-IIIA_H; TIGR01647" /db_xref="CDD:273731" ORIGIN //...
AA_position 16
XM_028359349.1 - Glycine soja - NCBI
PREDICTED: Camellia sinensis protein ENHANCED DOWNY MILDEW 2-like (LOC114301252), transcript variant X2, mRNA. (694 bp)
alignments, including 71 samples with support for all annotated introns" /db_xref="GeneID:114301252" CDS 452..685 /gene="LOC114301252" /codon_start=1 /product="protein ENHANCED DOWNY MILDEW 2-like isoform X2" /protein_id="XP_028101981.1" /db_xref="GeneID:114301252" /translation="MIVDVLHFYVQDGDMKLDKTGTRCSYKNYDVLQAKNDFNFEDRDWMTVHPKEFPTGSQLVRIMFLLFNMLDLEILGL" ORIGIN //...
AA_position 18
XM_028246180.1 - Camellia sinensis - NCBI
Alternaria arborescens hypothetical protein (AA0111_g11739), partial mRNA. (237 bp)
xref="taxon:156630" /chromosome="Unknown" gene 237 /locus_tag="AA0111_g11739" /db_xref="GeneID:39615252" CDS 1..237 /locus_tag="AA0111_g11739" /codon_start=1 /product="hypothetical protein" /protein_id="XP_028500696.1" /db_xref="GeneID:39615252" /translation="MSSPAQPSPEVLQAYYQRLETLYSSLPDLLTTEQEDKTGTEALEQDVGKLDVKEPNLQDRVNKYCQEFLYIGGPTPHK" misc_feature 204 /locus_tag="AA0111_g11739" /note="chromosome partition protein MukB; Region: mukB; PRK04863" /db_xref="CDD:235316" ORIGIN // REFERENCE 1 (bases 1 to 237) AUTHORS Armitage,A.D., Cockerton,H.M., Sreenivasaprasad,S., Woodhall,J., Lane,C.,...
AA_position 36
XM_028645638.1 - Alternaria arborescens - NCBI
PREDICTED: Camellia sinensis protein ENHANCED DOWNY MILDEW 2-like (LOC114301252), transcript variant X1, mRNA. (697 bp)
including 72 samples with support for all annotated introns" /db_xref="GeneID:114301252" CDS 452..688 /gene="LOC114301252" /codon_start=1 /product="protein ENHANCED DOWNY MILDEW 2-like isoform X1" /protein_id="XP_028101980.1" /db_xref="GeneID:114301252" /translation="MIVDVLHFYVQDGDMKKLDKTGTRCSYKNYDVLQAKNDFNFEDRDWMTVHPKEFPTGSQLVRIMFLLFNMLDLEILGL" ORIGIN //...
AA_position 19
XM_028246179.1 - Camellia sinensis - NCBI
PREDICTED: Ceratina calcarata fibrillin-1-like (LOC108632070), mRNA. (357 bp)
samples with support for all annotated introns" /db_xref="GeneID:108632070" CDS 109..357 /gene="LOC108632070" /codon_start=1 /product="fibrillin-1-like" /protein_id="XP_017891864.2" /db_xref="GeneID:108632070" /translation="MGAAWGPHCEICPSKDSDNYNELCLDKGFSVDGQDIDECRTIPDLCKNGLCINTLGSYRCVCNKGYKADKTGTQCVGMHSTL" misc_feature <109..180 /gene="LOC108632070" /note="TB domain; Region: TB; pfam00683" /db_xref="CDD:425818" misc_feature 211..303 /gene="LOC108632070" /note="Calcium-binding EGF domain; Region: EGF_CA; pfam07645" /db_xref="CDD:429571" misc_feature order(211..213,220..222,265..267) /gene="...
AA_position 69
XM_018036375.2 - Ceratina calcarata - NCBI
PREDICTED: Misgurnus anguillicaudatus protein PET117 homolog, mitochondrial (LOC129453150), transcript variant X2, mRNA. (808 bp)
to: 5 Proteins" /db_xref="GeneID:129453150" CDS 113..361 /gene="LOC129453150" /codon_start=1 /product="protein PET117 homolog, mitochondrial" /protein_id="XP_055073203.1" /db_xref="GeneID:129453150" /translation="MSTTSKVVLGVSIVLTISTVAGVHIKQNWDRQRLRDGVLRDLERVERKRENLRTLEEQIQLTRELVADRERREGDKTGTHTS" polyA_site 808 /gene="LOC129453150" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN //...
AA_position 75
XM_055217228.1 - Misgurnus anguillicaudatus (oriental weatherfish) - NCBI
PREDICTED: Misgurnus anguillicaudatus protein PET117 homolog, mitochondrial (LOC129453150), transcript variant X1, mRNA. (810 bp)
to: 5 Proteins" /db_xref="GeneID:129453150" CDS 109..357 /gene="LOC129453150" /codon_start=1 /product="protein PET117 homolog, mitochondrial" /protein_id="XP_055073202.1" /db_xref="GeneID:129453150" /translation="MSTTSKVVLGVSIVLTISTVAGVHIKQNWDRQRLRDGVLRDLERVERKRENLRTLEEQIQLTRELVADRERREGDKTGTHTS" polyA_site 810 /gene="LOC129453150" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN //...
AA_position 75
XM_055217227.1 - Misgurnus anguillicaudatus (oriental weatherfish) - NCBI
Suillus bovinus uncharacterized protein (EDB93DRAFT_1091388), partial mRNA. (246 bp)
AA_position 42
XM_041446351.1 - Suillus bovinus - NCBI
PREDICTED: Myotis brandtii cathepsin O-like (LOC102254807), mRNA. (1040 bp)
alignments, including 27 samples with support for all annotated introns" /db_xref="GeneID:102254807" CDS 382..633 /gene="LOC102254807" /codon_start=1 /product="cathepsin O-like" /protein_id="XP_005853064.1" /db_xref="GeneID:102254807" /translation="MAKALLTFGPLVGIVDAVSWQDYLGGIIQHHCSSGEANHAIIITGFDKTGTTPYWIVRNSWGSSWGVDGYAHVKMGSNICGES" misc_feature <382..624 /gene="LOC102254807" /note="C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes...
AA_position 47
XM_005853002.2 - Myotis brandtii (Brandt's bat) - NCBI
PREDICTED: Brassica napus calcium-transporting ATPase 9, plasma membrane-type-like (LOC106375071), transcript variant X1, mRNA. (1131 bp)
for all annotated introns" /db_xref="GeneID:106375071" CDS 649..900 /gene="LOC106375071" /codon_start=1 /product="calcium-transporting ATPase 9, plasma membrane-type-like" /protein_id="XP_048601138.1" /db_xref="GeneID:106375071" /translation="MTGESKIVRLNGLATFIGIVGLTVALVVLVRRLSACETMGSATTICSDKTGTLTLNRMNMSMRFIVLITMSPGSFPPLQLTLK" misc_feature 822 /gene="LOC106375071" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" polyA_site 1131 /gene="LOC106375071" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN //...
AA_position 48
XM_048745181.1 - Brassica napus (rape) - NCBI
PREDICTED: Brassica oleracea var. oleracea calcium-transporting ATPase 9, plasma membrane-type-like (LOC106295625), transcript variant X3, mRNA. (776 bp)
all annotated introns" /db_xref="GeneID:106295625" CDS 329..580 /gene="LOC106295625" /codon_start=1 /product="calcium-transporting ATPase 9, plasma membrane-type-like isoform X2" /protein_id="XP_013587050.1" /db_xref="GeneID:106295625" /translation="MTGESKIVRLNGLATFIGIVGLTVALVVLVRRLSACETMGSATTICSDKTGTLTLNRMNMSMRFIVLITMSPGSFPPLQLTLK" misc_feature 502 /gene="LOC106295625" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 48
XM_013731596.1 - Brassica oleracea var. oleracea - NCBI
PREDICTED: Brassica oleracea var. oleracea calcium-transporting ATPase 9, plasma membrane-type-like (LOC106295625), transcript variant X2, mRNA. (831 bp)
all annotated introns" /db_xref="GeneID:106295625" CDS 384..635 /gene="LOC106295625" /codon_start=1 /product="calcium-transporting ATPase 9, plasma membrane-type-like isoform X2" /protein_id="XP_013587045.1" /db_xref="GeneID:106295625" /translation="MTGESKIVRLNGLATFIGIVGLTVALVVLVRRLSACETMGSATTICSDKTGTLTLNRMNMSMRFIVLITMSPGSFPPLQLTLK" misc_feature 557 /gene="LOC106295625" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 48
XM_013731591.1 - Brassica oleracea var. oleracea - NCBI
PREDICTED: Cervus canadensis ankyrin repeat and LEM domain-containing protein 2-like (LOC122425601), transcript variant X3, mRNA. (836 bp)
db_xref="GeneID:122425601" CDS 14..262 /gene="LOC122425601" /codon_start=1 /product="ankyrin repeat and LEM domain-containing protein 2-like isoform X3" /protein_id="XP_043300033.1" /db_xref="GeneID:122425601" /translation="MLWPRLAATEWAALAWELLGASVLLIAVRWLVRRLDRRPRGLGQSGPPDPPPRAAAGPAPDPAQMCLKDKTGTFMLWNAAQQ" ORIGIN //...
AA_position 69
XM_043444098.1 - Cervus canadensis - NCBI
PREDICTED: Puma concolor chromosome unknown C2orf70 homolog (CUNH2orf70), mRNA. (258 bp)
using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:112864348" CDS 1..258 /gene="CUNH2orf70" /codon_start=1 /product="UPF0573 protein C2orf70 homolog" /protein_id="XP_025783206.1" /db_xref="GeneID:112864348" /translation="MAQQHRKYYLDKTGTVPQVPYFVLPVKEWERYPLPTDLPPLSPEKKWHLLRVSPENLKTYQRFPSGKRVTPHERQRRDCYFEFRA" ORIGIN //...
AA_position 11
XM_025927421.1 - Puma concolor (puma) - NCBI
PREDICTED: Capsicum annuum probable copper-transporting ATPase HMA5 (LOC124898933), mRNA. (797 bp)
introns" /db_xref="GeneID:124898933" CDS 160..417 /gene="LOC124898933" /codon_start=1 /product="probable copper-transporting ATPase HMA5" /protein_id="XP_047269161.1" /db_xref="GeneID:124898933" /translation="MQIYSMQKRTQGLLKQVRTNGTWICSSVGISIMAIACACALGLATPAAVMVGKGVGASRGILIKGGQALEGEQKVNCILFDKTGT" misc_feature 414 /gene="LOC124898933" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 81
XM_047413205.1 - Capsicum annuum - NCBI
PREDICTED: Arachis ipaensis plasma membrane ATPase 2-like (LOC107641863), mRNA. (646 bp)
including 10 samples with support for all annotated introns" /db_xref="GeneID:107641863" CDS 386..646 /gene="LOC107641863" /codon_start=1 /product="plasma membrane ATPase 2-like" /protein_id="XP_020979443.1" /db_xref="GeneID:107641863" /translation="MVPSSSRRTRLVAGCKHSKLLKKGAITKRMTVIKEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFADGVNQDIVVQLYLWLQGHQG" misc_feature 610 /gene="LOC107641863" /note="plasma-membrane proton-efflux P-type ATPase; Region: ATPase-IIIA_H; TIGR01647" /db_xref="CDD:273731" ORIGIN //...
AA_position 45
XM_021123784.1 - Arachis ipaensis - NCBI
Psilocybe cubensis uncharacterized protein (JR316_0012732), partial mRNA. (261 bp)
country="USA:Massachusetts" /collection_date="2018-01-14" gene 261 /locus_tag="JR316_0012732" /db_xref="GeneID:71979052" CDS 1..261 /locus_tag="JR316_0012732" /codon_start=1 /product="hypothetical protein" /protein_id="XP_047743240.1" /db_xref="GeneID:71979052" /translation="MKLNIGTYHINGIFDKTGTQIEPIFTWKEIPKGDTLALALTPVLKIYAVADIKVSEVVKGEVQSGDIFAEKLIPLPPTSNWEVYVH" ORIGIN // REFERENCE 1 (bases 1 to 261) AUTHORS Mckernan,K.J., Crawford,S., Trippe,A., Kane,L.T. and Mclaughlin,S. TITLE Psilocybe cubensis genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 261) CONSRTM NCBI Genome Project TITLE Direct...
AA_position 15
XM_047898351.1 - Psilocybe cubensis - NCBI
PREDICTED: Olea europaea var. sylvestris calcium-transporting ATPase 5, plasma membrane-type-like (LOC111411632), mRNA. (360 bp)
samples with support for all annotated introns" /db_xref="GeneID:111411632" CDS 79..345 /gene="LOC111411632" /codon_start=1 /product="calcium-transporting ATPase 5, plasma membrane-type-like" /protein_id="XP_022897918.1" /db_xref="GeneID:111411632" /translation="MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVDVFACGKKIEPPDNKSLLPPNVMSLLLEGISQNTTGSIYVPEVGYC" misc_feature 309 /gene="LOC111411632" /note="plasma-membrane calcium-translocating P-type ATPase; Region: ATPase-IIB_Ca; TIGR01517" /db_xref="CDD:273668" ORIGIN //...
AA_position 29
XM_023042150.1 - Olea europaea var. sylvestris - NCBI
Gloeophyllum trabeum ATCC 11539 uncharacterized protein (GLOTRDRAFT_51633), partial mRNA. (258 bp)
db_xref="GeneID:19306840" CDS <1..258 /locus_tag="GLOTRDRAFT_51633" /note="predicted protein" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_007871784.1" /db_xref="GeneID:19306840" /db_xref="JGIDB:Glotr1_1_51633" /translation="NLNLSKSFRFNIKGHKKYFLTGMVYHGEYHFNCRFIDKTGTIWYNDGITTGKQCVIEGTLSNTDMTDLTKCKGKDISLVIYAQCY" ORIGIN // REFERENCE 1 (bases 1 to 258) AUTHORS Floudas,D., Binder,M., Riley,R., Barry,K., Blanchette,R.A., Henrissat,B., Martinez,A.T., Otillar,R., Spatafora,J.W., Yadav,J.S., Aerts,A., Benoit,I., Boyd,A., Carlson,A., Copeland,A., Coutinho,P.M., de Vries,R.P.,...
AA_position 37
XM_007873593.1 - Gloeophyllum trabeum ATCC 11539 - NCBI
Gloeophyllum trabeum ATCC 11539 uncharacterized protein (GLOTRDRAFT_50897), partial mRNA. (258 bp)
db_xref="GeneID:19306768" CDS <1..258 /locus_tag="GLOTRDRAFT_50897" /note="predicted protein" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_007871319.1" /db_xref="GeneID:19306768" /db_xref="JGIDB:Glotr1_1_50897" /translation="NLNLSKSFRFNIKGHKKYFLTGMVYHGEYHFNCRFIDKTGTIWYNDGITTGKQCVIEGTLSNTDMTDLTKCKGKDISLVIYAQCY" ORIGIN // REFERENCE 1 (bases 1 to 258) AUTHORS Floudas,D., Binder,M., Riley,R., Barry,K., Blanchette,R.A., Henrissat,B., Martinez,A.T., Otillar,R., Spatafora,J.W., Yadav,J.S., Aerts,A., Benoit,I., Boyd,A., Carlson,A., Copeland,A., Coutinho,P.M., de Vries,R.P.,...
AA_position 37
XM_007873128.1 - Gloeophyllum trabeum ATCC 11539 - NCBI
Sphaeroforma arctica JP610 hypothetical protein partial mRNA. (267 bp)
AA_position 26
XM_014300794.1 - Sphaeroforma arctica JP610 - NCBI
PREDICTED: Brassica oleracea var. oleracea calcium-transporting ATPase 9, plasma membrane-type-like (LOC106295625), transcript variant X1, mRNA. (628 bp)
all annotated introns" /db_xref="GeneID:106295625" CDS 163..432 /gene="LOC106295625" /codon_start=1 /product="plasma membrane calcium-transporting ATPase 2-like isoform X1" /protein_id="XP_013587036.1" /db_xref="GeneID:106295625" /translation="MILLVQLCAVKRSCNLHRYSGAHGGSCCTGSSSCEVRRLSACETMGSATTICSDKTGTLTLNRMNMSMRFIVLITMSPGSFPPLQLTLK" misc_feature 354 /gene="LOC106295625" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 54
XM_013731582.1 - Brassica oleracea var. oleracea - NCBI
PREDICTED: Doryrhamphus excisus placenta-specific protein 9-like (LOC131107602), transcript variant X2, mRNA. (3430 bp)
method: Gnomon." /db_xref="GeneID:131107602" CDS 92..364 /gene="LOC131107602" /codon_start=1 /product="placenta-specific protein 9-like isoform X2" /protein_id="XP_057913785.1" /db_xref="GeneID:131107602" /translation="MKIYVMGERKGKAEESERTPRSVSSSACQEHASLHSRLDVVEKEVEDTVGKLEAELDALLKDIQDPKWRPLLDKTGTPVDILEDPASVRS" misc_feature 164..>295 /gene="LOC131107602" /note="Placenta-specific protein 9; Region: PLAC9; pfam15205" /db_xref="CDD:434536" ORIGIN //...
AA_position 73
XM_058057802.1 - Doryrhamphus excisus (bluestripe pipefish) - NCBI
PREDICTED: Poecile atricapillus biliverdin reductase B (BLVRB), mRNA. (1163 bp)
analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:131590052" CDS 16..1095 /gene="BLVRB" /codon_start=1 /product="flavin reductase (NADPH)" /protein_id="XP_058715877.1" /db_xref="GeneID:131590052" /translation="MKTGIGIKPGPESNRDRDKTGTGTKPGLGSNRDRDWDKTGTGIKPGPGQNRDRNKTGIGISWIGISWIWIPRSGAAAPERCEPRRSRPARGSLPVPPSPSQFPPSPSQFPPSPARGRGQNSPVRSRSRFRSRFDPDPGPGSVRSRFGVRRMKKIAIFGATGRTGRVTLGLALEQGLEVTVLVRDPSRLPPGPSPTRLLQGDARDPRAVGEALRGQEGVLILLGTGTDLSPTTVMSDATKTIVEAMAEHGVPKVVVCLSAFLLWEPERVPERLRPLTEDHSRMERILRHSGLRCVYVMPPHIAVEQPLTGDYEVSVGVAGG...
AA_position 18
XM_058859894.1 - Poecile atricapillus (Black-capped chickadee) - NCBI
Brugia malayi crumbs homolog 3, putative (Bma-crb-3), partial mRNA. (276 bp)
gene="Bma-crb-3" /locus_tag="BM_BM2607" /old_locus_tag="Bm1_34790" /standard_name="Bm2607" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="crumbs homolog 3, putative" /protein_id="XP_042931562.1" /db_xref="GeneID:6101878" /translation="MSEVNSATVSTTTILTSTTEASDDDWNGDKTGTIVVILLVILISLIIAGYIGYRKLKERRRSHGEYRPQFEEYQHAKNLPYLQPPSIEGLI" ORIGIN // REFERENCE 1 (bases 1 to 276) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-AUG-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 2 AUTHORS Howe,K., Paulini,M. and...
AA_position 29
XM_043075628.1 - Brugia malayi - NCBI
PREDICTED: Bison bison bison plasma membrane calcium-transporting ATPase 3-like (LOC104983269), partial mRNA. (280 bp)
including 1 sample with support for all annotated introns" /db_xref="GeneID:104983269" CDS 280 /gene="LOC104983269" /codon_start=1 /product="plasma membrane calcium-transporting ATPase 3-like" /protein_id="XP_010831003.1" /db_xref="GeneID:104983269" /translation="KMMRDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYLGDTHYKEVPAPSALTPKILDILVHAISINSAYTTKILPPEKEGALPRQV" misc_feature 135 /gene="LOC104983269" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" misc_feature 79..93 /gene="LOC104983269" /note="HAD signature motif I; other site" /db_xref="CDD:319763"...
AA_position 27
XM_010832701.1 - Bison bison bison - NCBI
PREDICTED: Salvelinus namaycush plasma membrane calcium-transporting ATPase 2-like (LOC120037211), mRNA. (377 bp)
including 15 samples with support for all annotated introns" /db_xref="GeneID:120037211" CDS 3..287 /gene="LOC120037211" /codon_start=1 /product="plasma membrane calcium-transporting ATPase 2-like" /protein_id="XP_038839314.1" /db_xref="GeneID:120037211" /translation="MKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQTFLGDQHHRSVPEPEQVNPKTLELLVNAIAINSAYTSKIMVQRGTGGGREEIGTD" misc_feature 281 /gene="LOC120037211" /note="plasma-membrane calcium-translocating P-type ATPase; Region: ATPase-IIB_Ca; TIGR01517" /db_xref="CDD:273668" misc_feature 131 /gene="LOC120037211" /note="Haloacid Dehalogenase-like...
AA_position 25
XM_038983386.1 - Salvelinus namaycush (lake trout) - NCBI
Laetiporus sulphureus 93-53 uncharacterized protein (LAESUDRAFT_109092), mRNA. (546 bp)
GeneID:63818228" CDS 52..339 /locus_tag="LAESUDRAFT_109092" /note="expressed protein" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_040765133.1" /db_xref="GeneID:63818228" /db_xref="JGIDB:Laesu1_109092" /translation="MPNNVNASTQVQKPHSRQNSTSVLWGHLLSKDSITPALARNSASSYNSSIPPIAPADKTGTTGNYSWDERELDNLRGLLYLAGMMAHSYGTLNCL" ORIGIN // REFERENCE 1 (bases 1 to 546) AUTHORS Nagy,L.G., Riley,R., Tritt,A., Adam,C., Daum,C., Floudas,D., Sun,H., Yadav,J.S., Pangilinan,J., Larsson,K.H., Matsuura,K., Barry,K., Labutti,K., Kuo,R., Ohm,R.A., Bhattacharya,S.S., Shirouzu,T., Yoshinaga,Y., Martin,F.M...
AA_position 57
XM_040901196.1 - Laetiporus sulphureus 93-53 - NCBI
PREDICTED: Phasianus colchicus potassium-transporting ATPase alpha chain 1-like (LOC116241223), partial mRNA. (344 bp)
for all annotated introns" /db_xref="GeneID:116241223" CDS 59..>344 /gene="LOC116241223" /codon_start=1 /product="potassium-transporting ATPase alpha chain 1-like" /protein_id="XP_031467695.1" /db_xref="GeneID:116241223" /translation="MVFFMAIVVADVPEGLLATVTVCLSLTAKRLARKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVAHLWFDNQIHAADTTEDQSGTWGGGYG" misc_feature 325 /gene="LOC116241223" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 56
XM_031611835.1 - Phasianus colchicus (Ring-necked pheasant) - NCBI
PREDICTED: Doryrhamphus excisus placenta-specific protein 9-like (LOC131107602), transcript variant X1, mRNA. (3541 bp)
Gnomon." /db_xref="GeneID:131107602" CDS 184..477 /gene="LOC131107602" /codon_start=1 /product="placenta-specific protein 9-like isoform X1" /protein_id="XP_057913776.1" /db_xref="GeneID:131107602" /translation="MTRPSTAVVGLLILLIGYTVAESERTPRSVSSSACQEHASLHSRLDVVEKEVEDTVGKLEAELDALLKDIQDPKWRPLLDKTGTPVDILEDPASVRS" misc_feature 277..>408 /gene="LOC131107602" /note="Placenta-specific protein 9; Region: PLAC9; pfam15205" /db_xref="CDD:434536" ORIGIN //...
AA_position 80
XM_058057793.1 - Doryrhamphus excisus (bluestripe pipefish) - NCBI
Suillus discolor cyclophilin-like domain-containing protein (F5147DRAFT_148620), mRNA. (726 bp)
locus_tag="F5147DRAFT_148620" /codon_start=1 /product="cyclophilin-like domain-containing protein" /protein_id="XP_041293620.1" /db_xref="GeneID:64690538" /db_xref="InterPro:IPR002130" /db_xref="JGIDB:Suidis1_148620" /translation="MALPTNGRVIIDITAGEIEIELWSKETPRTCRNFIALALEGYYDGVIFHRIVPGFLVQTGDKTGTGGGGESFYGAKRCGCPLIPHPNSVDIASTSRWKA" misc_feature 108..>323 /locus_tag="F5147DRAFT_148620" /note="cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in...
AA_position 61
XM_041428279.1 - Suillus discolor - NCBI
PREDICTED: Zonotrichia albicollis sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like (LOC102065920), mRNA. (421 bp)
samples with support for all annotated introns" /db_xref="GeneID:102065920" CDS 116..421 /gene="LOC102065920" /codon_start=1 /product="sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like" /protein_id="XP_014129602.1" /db_xref="GeneID:102065920" /translation="MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIMDKVEGDICSLSEFSITGSTYAPEGEVLKQDRPVKAGQFDGLLWVVGPHNRWWDLVMG" misc_feature 379 /gene="LOC102065920" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 26
XM_014274127.2 - Zonotrichia albicollis (white-throated sparrow) - NCBI
Glarea lozoyensis ATCC 20868 uncharacterized protein (GLAREA_07464), partial mRNA. (297 bp)
Spain" gene 297 /locus_tag="GLAREA_07464" /db_xref="GeneID:19466517" CDS 1..297 /locus_tag="GLAREA_07464" /note="GLAREA_07464" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_008080343.1" /db_xref="GeneID:19466517" /translation="MPRNFSFTLIYVLALLGVAMSTSFSNTTHHTSTTCLTCNTTVSTKTAPHSDKTGTATRTGATGTGQGVISTGAAATGGVGVWEGIGLGVVVLGGLLGV" ORIGIN // REFERENCE 1 (bases 1 to 297) AUTHORS Chen,L., Yue,Q., Zhang,X., Xiang,M., Wang,C., Li,S., Che,Y., Ortiz-Lopez,F.J., Bills,G.F., Liu,X. and An,Z. TITLE Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea...
AA_position 51
XM_008082152.1 - Glarea lozoyensis ATCC 20868 - NCBI
PREDICTED: Schistocerca cancellata nucleolar complex protein 2 homolog (LOC126170885), mRNA. (493 bp)
Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:126170885" CDS 63..368 /gene="LOC126170885" /codon_start=1 /product="nucleolar complex protein 2 homolog" /protein_id="XP_049776714.1" /db_xref="GeneID:126170885" /translation="MSNCSVPTVTVKDKTGTVLVEIKGNKSQDLKEFSQTLKDVQKQVNTYLTNLIHNDAPGDSVNSDSDGSEDAEEEEDDDDDDNDQTAGSDDAGGPASKRKKC" ORIGIN //...
AA_position 13
XM_049920757.1 - Schistocerca cancellata (South American locust) - NCBI
PREDICTED: Centruroides sculpturatus calcium-transporting ATPase type 2C member 1-like (LOC111617534), mRNA. (324 bp)
alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:111617534" CDS 16..324 /gene="LOC111617534" /codon_start=1 /product="calcium-transporting ATPase type 2C member 1-like" /protein_id="XP_023214618.1" /db_xref="GeneID:111617534" /translation="MKIILKFLGCVNVVCSDKTGTLTKNEMTVTNIITSELYHAEVTGVGYNNDGHILLVDSGNSDLQLNSIRLLLKVGCICNNADIVNGQLRGQPTEGLIYFVTR" misc_feature 306 /gene="LOC111617534" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 17
XM_023358850.1 - Centruroides sculpturatus (bark scorpion) - NCBI
PREDICTED: Vicugna pacos phospholipid-transporting ATPase IK-like (LOC116278355), partial mRNA. (316 bp)
with support for all annotated introns" /db_xref="GeneID:116278355" CDS 13..>316 /gene="LOC116278355" /codon_start=1 /product="phospholipid-transporting ATPase IK-like" /protein_id="XP_031529233.1" /db_xref="GeneID:116278355" /translation="MVPMAMFIMAEFIYLGNSIFINWDMHMYYEPQDMPAKARSTSLNDQLGQVEYVFSDKTGTLTQNVMAFRKCCISGVVYGEAPARHPFPTGAARPGPLQPAR" misc_feature 249 /gene="LOC116278355" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN //...
AA_position 56
XM_031673373.1 - Vicugna pacos (alpaca) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/aa%3aDKTGT
lang : en | div : | spe : | query_string : aa:DKTGT | format : html | download : 

0.000 | 0.000 | search_start;
0.150 | 0.150 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:DKTGT)?to=0&format=json
0.233 | 0.083 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:DKTGT)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.238 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]