LOCUS       XM_048745181            1131 bp    mRNA    linear   PLN 23-JUN-2022
DEFINITION  PREDICTED: Brassica napus calcium-transporting ATPase 9, plasma
            membrane-type-like (LOC106375071), transcript variant X1, mRNA.
ACCESSION   XM_048745181
VERSION     XM_048745181.1
DBLINK      BioProject: PRJNA844685
KEYWORDS    RefSeq.
SOURCE      Brassica napus (rape)
  ORGANISM  Brassica napus
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Brassiceae; Brassica.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_063444) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Brassica napus Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Brassica napus"
                     /mol_type="mRNA"
                     /cultivar="Da-Ae"
                     /db_xref="taxon:3708"
                     /chromosome="C1"
                     /tissue_type="Seedling"
                     /dev_stage="Seedling"
                     /country="USA"
     gene            1..1131
                     /gene="LOC106375071"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 long SRA read, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 5 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:106375071"
     CDS             649..900
                     /gene="LOC106375071"
                     /codon_start=1
                     /product="calcium-transporting ATPase 9, plasma
                     membrane-type-like"
                     /protein_id="XP_048601138.1"
                     /db_xref="GeneID:106375071"
                     /translation="

MTGESKIVRLNGLATFIGIVGLTVALVVLVRRLSACETMGSATTICSDKTGTLTLNRMNMSMRFIVLITMSPGSFPPLQLTLK"

     misc_feature    <733..>822
                     /gene="LOC106375071"
                     /note="Haloacid Dehalogenase-like Hydrolases; Region:
                     HAD_like; cl21460"
                     /db_xref="CDD:451251"
     polyA_site      1131
                     /gene="LOC106375071"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gatattgtccattaaggcccagcccgtttataaacccggccgagtgacgtgtgcggtgtggcaaagtcaggtgtaagtaacaatggtcggtcgaaccttcatcatttgcaggcttgcagctatgatcctcctcgtaatatttggggctgtaagagcaggattaacgctgtctttagatgggtttcttagtgtatttatgatttaaagaaaaagaaaaattgtaattaccacaaaagatgtctcttaatcaggcgatggaagatccgtatcttataagacacgtgtcactattaaaaaaattggaagtctttcgtctcttctcttcctttctatctcttcctctcacattctctctttccctcctcctcaattttcctataaagcttcgaactttaagctctcctcctcatgggttctccttgtttctctccctatattggtttaaagcatatgggcatctccatctccccgaaatcttcgaacccagagaagaagagaagatgtagtaagggtttggtgattcgtgcgtctttgtttggcgttggagcacatgaggcttacaggtcatgagaggaaggagaacagtgaagatatcaatctacgacattgttgtcggagatgttatacctcttagaataggtgaccggcatgacgggtgaaagcaagattgtgcggttaaacggtcttgcaaccttcatcggtatagtggggctcacggtggctcttgttgtactggttaggaggctttcagcttgtgaaaccatgggttcagcaacaacaatttgcagtgataaaactggaactttaactttgaatcggatgaacatgtctatgaggttcatcgttctgatcaccatgtcaccaggttcgttccctcccttacagctcactcttaaatgaacatgtcttgattctggttggtgttagatatatggttagtgttagtgttaaatgtggttagtgaacatcgttctgaacatcgtagtgaagcttgtaatcttgtgtattcatgtgtcacgggagcttgtagtcttgtaatcttctctatattaagttttggtaaaaccaaacaatttgatcgcaaattttcttgttctctcattttctatatataaagtcatattctcttct

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