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2024-05-19 10:32:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_001615096            1071 bp    mRNA    linear   INV 17-APR-2018
DEFINITION  Plasmodium vivax tryptophan-rich antigen (Pv-fam-a) (PVX_090270),
            partial mRNA.
ACCESSION   XM_001615096
VERSION     XM_001615096.1
DBLINK      BioProject: PRJNA20431
            BioSample: SAMN02953638
KEYWORDS    RefSeq.
SOURCE      Plasmodium vivax (malaria parasite P. vivax)
  ORGANISM  Plasmodium vivax
            Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
            Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Carlton,J.M., Adams,J.H., Silva,J.C., Bidwell,S.L., Lorenzi,H.,
            Caler,E., Crabtree,J., Angiuoli,S.V., Merino,E.F., Amedeo,P.,
            Cheng,Q., Coulson,R.M., Crabb,B.S., Del Portillo,H.A., Essien,K.,
            Feldblyum,T.V., Fernandez-Becerra,C., Gilson,P.R., Gueye,A.H.,
            Guo,X., Kang'a,S., Kooij,T.W., Korsinczky,M., Meyer,E.V., Nene,V.,
            Paulsen,I., White,O., Ralph,S.A., Ren,Q., Sargeant,T.J.,
            Salzberg,S.L., Stoeckert,C.J., Sullivan,S.A., Yamamoto,M.M.,
            Hoffman,S.L., Wortman,J.R., Gardner,M.J., Galinski,M.R.,
            Barnwell,J.W. and Fraser-Liggett,C.M.
  TITLE     Comparative genomics of the neglected human malaria parasite
            Plasmodium vivax
  JOURNAL   Nature 455 (7214), 757-763 (2008)
   PUBMED   18843361
REFERENCE   2  (bases 1 to 1071)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-APR-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1071)
  AUTHORS   Amedeo,P., Wortman,J. and Carlton,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2006) The Institute for Genomic Research, 9712
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_009910).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Plasmodium vivax"
                     /mol_type="mRNA"
                     /strain="Salvador I"
                     /db_xref="taxon:5855"
                     /chromosome="5"
     gene            <1..>1071
                     /locus_tag="PVX_090270"
                     /db_xref="GeneID:5474437"
     CDS             1..1071
                     /locus_tag="PVX_090270"
                     /note="encoded by transcript PVX_090270A"
                     /codon_start=1
                     /product="tryptophan-rich antigen (Pv-fam-a)"
                     /protein_id="XP_001615146.1"
                     /db_xref="GeneID:5474437"
                     /translation="
MAKKTVTKVAKKKVTKVAEKTGTKVADKTGTKVADKTGTKVADKTGTKVAEKTGTKVADKTGTKVAEKTGTNISQKEDEKGPPKEDTQGTQKADAKAIQQADAQVSEKWKKKEWKEWIKKAESDLDIFNALMDNEKEKKWYSEKEKEWNKWIKGVEKKWMHYNKNIYVEYRSLVFWVGLKWVESQWEKWILSDGLEFLVMDWKKWIKENKSNFDEWLKSEWDTWTNSQMEEWKSSNWKLNEDKRWEMWENDKKWIKWLYLKDWINCSKWKKRIQKESKEWLRWTKLKEEMYKNKYGDKWKEWRTDKSIVYDDWKDDLAKRMIKKKQWQVWLKERTALIEKRKAAYPAIMKDIRFIE"
     misc_feature    364..981
                     /locus_tag="PVX_090270"
                     /note="Tryptophan-Threonine-rich plasmodium antigen C
                     terminal; Region: TryThrA_C; pfam12319"
                     /db_xref="CDD:432476"
ORIGIN      
atggctaaaaaaacagttacaaaggtggctaaaaaaaaagttacaaaggtggctgaaaaaacaggcacaaaagtagccgacaaaacaggcacaaaagtagccgacaaaacaggcacaaaagtagccgacaaaacaggcacaaaagtagcggaaaaaacaggtacaaaagtagccgacaaaacaggtacaaaagtagcggaaaaaacggggacaaatatttcccaaaaagaggacgaaaaaggccccccaaaggaagacacacagggcacccaaaaggccgacgcaaaggccatccaacaggccgacgcgcaggtctccgaaaaatggaaaaaaaaagagtggaaagagtggataaaaaaagcggaatccgatttggacatcttcaacgccctcatggataatgaaaaagaaaaaaagtggtacagcgagaaagaaaaggaatggaacaagtggataaaaggtgtagaaaaaaagtggatgcattataacaaaaatatttatgttgaataccgatccctagttttctgggtaggtttaaaatgggtagaatcacaatgggaaaagtggattctatctgatgggttagaatttttggtgatggattggaaaaaatggatcaaggaaaataaatcaaatttcgacgaatggcttaaatctgagtgggatacttggacaaatagccaaatggaggaatggaaatccagtaactggaaacttaacgaagataaacgctgggaaatgtgggaaaatgataaaaaatggatcaaatggttgtacttaaaggattggataaattgtagcaaatggaaaaagagaatacaaaaagaatcgaaagaatggcttcgctggacgaagttaaaggaagaaatgtataaaaataaatacggcgataagtggaaagagtggagaaccgataaaagtatcgtctatgatgactggaaggatgacctcgcaaagaggatgatcaagaagaagcagtggcaagtgtggcttaaggagaggactgcccttatagagaagaggaaagccgcctatcccgccatcatgaaggatataagatttattgagtga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]