2024-05-19 10:32:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_001615096 1071 bp mRNA linear INV 17-APR-2018 DEFINITION Plasmodium vivax tryptophan-rich antigen (Pv-fam-a) (PVX_090270), partial mRNA. ACCESSION XM_001615096 VERSION XM_001615096.1 DBLINK BioProject: PRJNA20431 BioSample: SAMN02953638 KEYWORDS RefSeq. SOURCE Plasmodium vivax (malaria parasite P. vivax) ORGANISM Plasmodium vivax Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium). REFERENCE 1 (bases 1 to 1071) AUTHORS Carlton,J.M., Adams,J.H., Silva,J.C., Bidwell,S.L., Lorenzi,H., Caler,E., Crabtree,J., Angiuoli,S.V., Merino,E.F., Amedeo,P., Cheng,Q., Coulson,R.M., Crabb,B.S., Del Portillo,H.A., Essien,K., Feldblyum,T.V., Fernandez-Becerra,C., Gilson,P.R., Gueye,A.H., Guo,X., Kang'a,S., Kooij,T.W., Korsinczky,M., Meyer,E.V., Nene,V., Paulsen,I., White,O., Ralph,S.A., Ren,Q., Sargeant,T.J., Salzberg,S.L., Stoeckert,C.J., Sullivan,S.A., Yamamoto,M.M., Hoffman,S.L., Wortman,J.R., Gardner,M.J., Galinski,M.R., Barnwell,J.W. and Fraser-Liggett,C.M. TITLE Comparative genomics of the neglected human malaria parasite Plasmodium vivax JOURNAL Nature 455 (7214), 757-763 (2008) PUBMED 18843361 REFERENCE 2 (bases 1 to 1071) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-APR-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1071) AUTHORS Amedeo,P., Wortman,J. and Carlton,J. TITLE Direct Submission JOURNAL Submitted (08-DEC-2006) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009910). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1071 /organism="Plasmodium vivax" /mol_type="mRNA" /strain="Salvador I" /db_xref="taxon:5855" /chromosome="5" gene <1..>1071 /locus_tag="PVX_090270" /db_xref="GeneID:5474437" CDS 1..1071 /locus_tag="PVX_090270" /note="encoded by transcript PVX_090270A" /codon_start=1 /product="tryptophan-rich antigen (Pv-fam-a)" /protein_id="XP_001615146.1" /db_xref="GeneID:5474437" /translation="
MAKKTVTKVAKKKVTKVAEKTGTKVADKTGTKVADKTGTKVADKTGTKVAEKTGTKVADKTGTKVAEKTGTNISQKEDEKGPPKEDTQGTQKADAKAIQQADAQVSEKWKKKEWKEWIKKAESDLDIFNALMDNEKEKKWYSEKEKEWNKWIKGVEKKWMHYNKNIYVEYRSLVFWVGLKWVESQWEKWILSDGLEFLVMDWKKWIKENKSNFDEWLKSEWDTWTNSQMEEWKSSNWKLNEDKRWEMWENDKKWIKWLYLKDWINCSKWKKRIQKESKEWLRWTKLKEEMYKNKYGDKWKEWRTDKSIVYDDWKDDLAKRMIKKKQWQVWLKERTALIEKRKAAYPAIMKDIRFIE"
misc_feature 364..981 /locus_tag="PVX_090270" /note="Tryptophan-Threonine-rich plasmodium antigen C terminal; Region: TryThrA_C; pfam12319" /db_xref="CDD:432476" ORIGIN
atggctaaaaaaacagttacaaaggtggctaaaaaaaaagttacaaaggtggctgaaaaaacaggcacaaaagtagccgacaaaacaggcacaaaagtagccgacaaaacaggcacaaaagtagccgacaaaacaggcacaaaagtagcggaaaaaacaggtacaaaagtagccgacaaaacaggtacaaaagtagcggaaaaaacggggacaaatatttcccaaaaagaggacgaaaaaggccccccaaaggaagacacacagggcacccaaaaggccgacgcaaaggccatccaacaggccgacgcgcaggtctccgaaaaatggaaaaaaaaagagtggaaagagtggataaaaaaagcggaatccgatttggacatcttcaacgccctcatggataatgaaaaagaaaaaaagtggtacagcgagaaagaaaaggaatggaacaagtggataaaaggtgtagaaaaaaagtggatgcattataacaaaaatatttatgttgaataccgatccctagttttctgggtaggtttaaaatgggtagaatcacaatgggaaaagtggattctatctgatgggttagaatttttggtgatggattggaaaaaatggatcaaggaaaataaatcaaatttcgacgaatggcttaaatctgagtgggatacttggacaaatagccaaatggaggaatggaaatccagtaactggaaacttaacgaagataaacgctgggaaatgtgggaaaatgataaaaaatggatcaaatggttgtacttaaaggattggataaattgtagcaaatggaaaaagagaatacaaaaagaatcgaaagaatggcttcgctggacgaagttaaaggaagaaatgtataaaaataaatacggcgataagtggaaagagtggagaaccgataaaagtatcgtctatgatgactggaaggatgacctcgcaaagaggatgatcaagaagaagcagtggcaagtgtggcttaaggagaggactgcccttatagagaagaggaaagccgcctatcccgccatcatgaaggatataagatttattgagtga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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