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2024-05-19 10:32:53, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_033877694            1776 bp    mRNA    linear   INV 28-APR-2020
DEFINITION  PREDICTED: Pecten maximus spore wall protein 2-like (LOC117322756),
            mRNA.
ACCESSION   XM_033877694
VERSION     XM_033877694.1
DBLINK      BioProject: PRJNA625562
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pecten maximus
  ORGANISM  Pecten maximus
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
            Pecten.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_047017.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pecten maximus Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Pecten maximus"
                     /mol_type="mRNA"
                     /db_xref="taxon:6579"
                     /chromosome="3"
     gene            1..1776
                     /gene="LOC117322756"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:117322756"
     CDS             1..1776
                     /gene="LOC117322756"
                     /codon_start=1
                     /product="spore wall protein 2-like"
                     /protein_id="XP_033733585.1"
                     /db_xref="GeneID:117322756"
                     /translation="
MHNDEFTFKATTCRANKDKTGPKIDKTGTKIDETAPKIDKTGPKIDKTGTNNGITGANKDKTGTKIDKTGTKIDKTGTKIDKTGAKKDKTGPKIDKTETKIDKTGPKIDKTGPKIDKTGPKIDKTGTHNVITGANKDKTGTNNGANKDKTGANKDKTGTNNGITEESKDKTGANKDKTGANKVITGANKGITGANKDKTGANNGITGANKDKTGTNNGITGANKDKTGPKIDKTETKIDKTRPKIDKTGPKIDKTGPKIDKTGTHNVITGANKDKTGTNNGITGANKDKTGTKIDKTGTKIDKTGTHNVITGANKDKTGTNKDKTGANNGITGANKDKTGTNNGITGANKDKTGANKGITEESKDKTGANNGITGANKDKTGANKVITGANKGITGANKDKTGANKDKTGTNKDKTGTNNGITGANKDKTGTNKDKTGTNNVITGANKDKTGTNKDKTGTNNVITGTNKDKTGANNGITGANKDKTGANNGITGANKDKTGTNNVITGANKDKTGANNGITEESKDKTGANKDKTGTNNGITGANKDKTGANKDSTGANKDNNRAPEEHPDITVARGELLVSDNWRITIQQ"
     misc_feature    1276..1563
                     /gene="LOC117322756"
                     /note="Left-handed beta-roll, including virulence factors
                     and various other proteins; Region: LbR-like; cl17507"
                     /db_xref="CDD:248061"
     misc_feature    order(1294..1296,1300..1302,1306..1314,1339..1341,
                     1345..1347,1351..1356,1381..1383,1387..1389,1393..1395,
                     1399..1401,1423..1425,1429..1431,1435..1437,1441..1443,
                     1465..1467,1471..1473,1477..1485,1507..1509,1513..1515)
                     /gene="LOC117322756"
                     /note="trimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:240610"
ORIGIN      
atgcacaacgacgagttcacattcaaggccacaacttgccgagcaaacaaagacaaaacaggaccaaagatagacaaaacaggaacaaagatagacgaaacagcaccaaagatagacaaaacaggaccaaagatagataaaacaggaacaaacaatggtattacaggagcaaacaaagacaaaacaggaacaaagatagacaaaacaggaacaaagatagacaaaacaggaacaaagatagacaaaacaggagcaaagaaagacaaaacaggaccaaagatagacaaaacagaaacaaagatagacaaaacaggaccaaagatagataaaacaggaccaaagatagacaaaacaggaccaaagatagacaaaacaggaacacacaatgttattacaggagcaaacaaagataaaacaggaacaaacaatggagcaaacaaagacaaaacaggagcaaacaaagataaaacaggaacaaacaatggtattacagaagaaagcaaagacaaaacaggagcaaacaaagacaaaacaggagcaaacaaagttattacaggagcaaacaaaggtattacaggagcaaacaaagacaaaacaggagcaaacaatggtattacaggagcaaacaaagacaaaacaggaacaaacaatggtataacaggagcaaacaaagacaaaacaggaccaaagatagacaaaacagaaacaaagatagacaaaacaagaccaaagatagataaaacaggaccaaagatagacaaaacaggaccaaagatagacaaaacaggaacacacaatgttattacaggagcaaacaaagataaaacaggaacgaacaatggtattacaggagcaaacaaagacaaaacaggaacaaagatagacaaaacaggaacaaagatagacaaaacaggaacacacaatgttattacaggagcaaacaaagataaaacaggaacgaacaaagacaaaacaggagcaaacaatggtattacaggagcaaacaaagacaaaacaggaacaaacaatggtataacaggagcaaacaaagacaaaacaggagcaaacaaaggtattacagaagaaagcaaagacaaaacaggagcaaacaatggtattacaggagcaaacaaagacaaaacaggagcaaacaaagttattacaggagcaaacaaaggtattacaggagcaaacaaagacaaaacaggagcaaacaaagacaaaacaggaacaaacaaagacaaaacaggaacaaacaatggtattacaggagcaaacaaagacaaaacaggaacaaacaaagacaaaacaggaacaaacaatgttattacaggagcaaacaaagacaaaacaggaacaaacaaagacaaaacaggaacaaacaatgttattacaggaacaaacaaagacaaaacaggagcaaacaatggtattacaggagcaaataaagacaaaacaggagcaaacaatggtattacaggagcaaacaaagacaaaacaggaacaaacaatgttattacaggagcaaacaaagacaaaacaggagcaaacaatggtattacagaagaaagcaaagacaaaacaggagcaaacaaagacaaaacaggaacaaacaatggtattacaggagcaaacaaagacaaaacaggagcaaacaaagacagtacaggagcaaacaaagacaacaaccgtgctccagaagagcatcctgatataactgtagcacgaggagagttgttggtgtcagataattggcggataacgattcagcaatag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]