2024-05-19 10:32:55, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_023358850 324 bp mRNA linear INV 22-DEC-2017 DEFINITION PREDICTED: Centruroides sculpturatus calcium-transporting ATPase type 2C member 1-like (LOC111617534), mRNA. ACCESSION XM_023358850 VERSION XM_023358850.1 DBLINK BioProject: PRJNA422877 KEYWORDS RefSeq; includes ab initio. SOURCE Centruroides sculpturatus (bark scorpion) ORGANISM Centruroides sculpturatus Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Scorpiones; Buthida; Buthoidea; Buthidae; Centruroides. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019384303.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Centruroides sculpturatus Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 7% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..324 /organism="Centruroides sculpturatus" /mol_type="mRNA" /isolate="CEXI.00-Female" /db_xref="taxon:218467" /chromosome="Unknown" /sex="female" /tissue_type="whole organism" /collection_date="01-Feb-2012" /note="non-domesticated species of scorpion" gene 1..324 /gene="LOC111617534" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:111617534" CDS 16..324 /gene="LOC111617534" /codon_start=1 /product="calcium-transporting ATPase type 2C member 1-like" /protein_id="XP_023214618.1" /db_xref="GeneID:111617534" /translation="
MKIILKFLGCVNVVCSDKTGTLTKNEMTVTNIITSELYHAEVTGVGYNNDGHILLVDSGNSDLQLNSIRLLLKVGCICNNADIVNGQLRGQPTEGLIYFVTR"
misc_feature <25..>306 /gene="LOC111617534" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN
atttattttgtagttatgaaaattattcttaaatttttaggctgtgtaaatgtagtttgttctgataaaactggaactttaacaaagaatgaaatgactgtcacaaatattattacatctgagttatatcatgcagaagttacaggtgttggttataataatgatggtcatatacttttggttgactcaggaaatagtgatcttcaacttaattcaattcgcttactattaaaagttggttgcatatgtaacaatgctgatattgttaatggacaactcagaggacaaccgaccgaaggtttaatatattttgtaactagataa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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