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2024-11-21 21:39:07, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Danio rerio SIX homeobox 6a (six6a), mRNA. (1317 bp)
LOCUS NM_201105 1317 bp mRNA linear VRT 14-MAR-2021 DEFINITION Danio rerio SIX homeobox 6a (six6a), mRNA. ACCESSION NM_201105 VERSION NM_201105.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii;...PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 1317) AUTHORS Ogawa Y, Shiraki T, Kojima D and Fukada Y. TITLE Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish JOURNAL Proc Biol Sci 282 (1812), 20150659 (2015) PUBMED 26180064...
Synonym: Six6; zgc:63871
NM_201105.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio mesenchyme homeobox 2b (meox2b), mRNA. (870 bp)
LOCUS NM_001045124 870 bp mRNA linear VRT 09-APR-2020 DEFINITION Danio rerio mesenchyme homeobox 2b (meox2b), mRNA. ACCESSION NM_001045124 XM_690253 VERSION NM_001045124.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX957323.7. On Sep 1, 2006 this sequence version...
Synonym: si:ch211-127c19.1
NM_001045124.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK3 homeobox 3 (nkx3.3), mRNA. (1530 bp)
LOCUS NM_001013324 1530 bp mRNA linear VRT 31-MAY-2020 DEFINITION Danio rerio NK3 homeobox 3 (nkx3.3), mRNA. ACCESSION NM_001013324 XM_009307529 XM_696054 VERSION NM_001013324.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU929568.8. On or before May 27, 2016 this sequence...
Synonym: zgc:113257
NM_001013324.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 9 (six9), mRNA. (794 bp)
LOCUS NM_001130608 794 bp mRNA linear VRT 13-MAR-2023 DEFINITION Danio rerio SIX homeobox 9 (six9), mRNA. ACCESSION NM_001130608 XM_684623 VERSION NM_001130608.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163024.1. On May 28, 2009 this sequence version replaced XM...
Synonym: si:dkey-149j18.3
NM_001130608.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio LIM homeobox 2a (lhx2a), mRNA. (1351 bp)
LOCUS NM_001159586 1351 bp mRNA linear VRT 09-APR-2020 DEFINITION Danio rerio LIM homeobox 2a (lhx2a), mRNA. ACCESSION NM_001159586 XM_001335385 VERSION NM_001159586.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX470252.10. On Jun 25, 2015 this sequence version replaced...
Synonym: si:dkey-261o10.1
NM_001159586.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 7 (irx7), mRNA. (1207 bp)
iroquois homeobox protein 7" /codon_start=1 /product="iroquois homeobox 7" /protein_id="NP_571956.1" /db_xref="GeneID:140746" /db_xref="ZFIN:ZDB-GENE-020103-1" /translation="MPASSTGFANFFMDRNINMPAGYQLLGCPPGMQQPPPHLVGMAGMPLPFSGIPGYSFIPYPHPGHMAHISNSYDLKAASPYHQALLGRGGPYYTPYRPIPADDPSRVTKVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRVSWASKGKSDEEDEEEEGESEEEGSLRKGTEDEDEIDPQTVDDEDEEDVVVSKSVEHRLAGGLEQQKESDKSDTLTKRESYKQIADVQKPKIWSLAETATSDIVKKPSDLKHLQTSPDFGQWWAGWPSRDSYSPVNLSTHDLLKQSQ" misc_feature 391..507 /gene="irx7" /gene_synonym="cb263; iro7; zgc:109841; ziro7" /note="Homeobox KN domain;...
Synonym: cb263; iro7; zgc:109841; ziro7
NM_131881.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. (3252 bp)
LOCUS NM_198813 3252 bp mRNA linear VRT 02-OCT-2022 DEFINITION Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. ACCESSION NM_198813 VERSION NM_198813.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY311506.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: tix1; zgc:110489; zhx3
NM_198813.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox C10a (hoxc10a), mRNA. (1601 bp)
LOCUS NM_001254944 1601 bp mRNA linear VRT 26-DEC-2022 DEFINITION Danio rerio homeobox C10a (hoxc10a), mRNA. ACCESSION NM_001254944 XM_003201219 VERSION NM_001254944.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX005254.9. On Dec 18, 2011 this sequence version replaced XM...
Synonym: hoxc10; z-81
NM_001254944.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 5b (irx5b), mRNA. (1231 bp)
LOCUS NM_001001405 1231 bp mRNA linear VRT 04-DEC-2022 DEFINITION Danio rerio iroquois homeobox 5b (irx5b), mRNA. ACCESSION NM_001001405 VERSION NM_001001405.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 407..523 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 836..889 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Motif in...
Synonym: iro5b; ziro5b
NM_001001405.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox containing 1a (hmbox1a), mRNA. (1881 bp)
LOCUS NM_001030264 1881 bp mRNA linear VRT 02-OCT-2022 DEFINITION Danio rerio homeobox containing 1a (hmbox1a), mRNA. ACCESSION NM_001030264 XM_695104 VERSION NM_001030264.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097126.1. On Aug 6, 2005 this sequence version...
Synonym: hmbox1; zgc:114064
NM_001030264.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio PROP paired-like homeobox 1 (prop1), mRNA. (852 bp)
LOCUS NM_001177461 852 bp mRNA linear VRT 08-AUG-2023 DEFINITION Danio rerio PROP paired-like homeobox 1 (prop1), mRNA. ACCESSION NM_001177461 XM_001341349 VERSION NM_001177461.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX004962.10. On Jul 24, 2010 this sequence version...
Synonym: si:ch211-93n23.5
NM_001177461.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio caudal type homeobox 1a (cdx1a), mRNA. (2245 bp)
LOCUS NM_212836 2245 bp mRNA linear VRT 16-APR-2022 DEFINITION Danio rerio caudal type homeobox 1a (cdx1a), mRNA. ACCESSION NM_212836 VERSION NM_212836.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115217.1. On Mar 25, 2007 this sequence version replaced NM_212836.2....
Synonym: cdx2
NM_212836.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio H6 family homeobox 1 (hmx1), mRNA. (849 bp)
LOCUS NM_001113526 849 bp mRNA linear VRT 05-AUG-2023 DEFINITION Danio rerio H6 family homeobox 1 (hmx1), mRNA. ACCESSION NM_001113526 XM_001334293 VERSION NM_001113526.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU050652.1. On Jan 17, 2008 this sequence version...
Synonym: im:7155045; Nkx5-3; nkx5.3; zgc:172164
NM_001113526.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 2a (irx2a), mRNA. (2239 bp)
LOCUS NM_201057 2239 bp mRNA linear VRT 04-DEC-2022 DEFINITION Danio rerio iroquois homeobox 2a (irx2a), mRNA. ACCESSION NM_201057 VERSION NM_201057.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii...; other site" /db_xref="CDD:238039" misc_feature 506..622 /gene="irx2a" /gene_synonym="Irx2; zgc:65872; zgc:77209; ziro2a" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 359..761 /gene="irx2a" /gene_synonym="Irx2; zgc:65872; zgc:77209; ziro2a" /...
Synonym: Irx2; zgc:65872; zgc:77209; ziro2a
NM_201057.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio highly divergent homeobox (hdx), transcript variant X2, misc_RNA. (1883 bp)
LOCUS XR_002459917 1883 bp RNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio highly divergent homeobox (hdx), transcript variant X2, misc_RNA. ACCESSION XR_002459917 VERSION XR_002459917.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence...
XR_002459917.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 7 (six7), mRNA. (3994 bp)
LOCUS NM_131354 3994 bp mRNA linear VRT 26-DEC-2022 DEFINITION Danio rerio SIX homeobox 7 (six7), mRNA. ACCESSION NM_131354 XM_682110 VERSION NM_131354.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC064701.1. On or before Jul 6, 2005 this sequence version replaced XM...
NM_131354.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ladybird homeobox 2 (lbx2), mRNA. (1764 bp)
LOCUS NM_001007134 1764 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio ladybird homeobox 2 (lbx2), mRNA. ACCESSION NM_001007134 VERSION NM_001007134.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075912.1. Publication Note: This RefSeq record includes a subset of...
Synonym: fc26c12; homeobox; lbx; lbx1; lbx1h; SI:zC207O21.2; wu:fc26c12; zgc:92170
NM_001007134.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2b (meis2b), transcript variant X1, mRNA. (2966 bp)
LOCUS XM_009294577 2966 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio Meis homeobox 2b (meis2b), transcript variant X1, mRNA. ACCESSION XM_009294577 VERSION XM_009294577.2 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 1023..1277 /gene="meis2b" /gene_synonym="meis2; meis2.1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1518..1529,1533..1535,1593..1595,1611..1613, 1650..1652,1656..1661,1668..1673,1677..1685) /gene="meis2b" /...
Synonym: meis2; meis2.1
XM_009294577.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio muscle segment homeobox 3 (msx3), mRNA. (2029 bp)
LOCUS NM_131272 2029 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio muscle segment homeobox 3 (msx3), mRNA. ACCESSION NM_131272 VERSION NM_131272.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL831745.3, EH593082.1, DT069743.1 and EH607545.1. On Aug 18, 2015 this...
Synonym: homeobox; msh-C; mshC; msx-c; msxc; zgc:86596
NM_131272.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox C4a (hoxc4a), transcript variant X1, mRNA. (2012 bp)
LOCUS XM_021469725 2012 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox C4a (hoxc4a), transcript variant X1, mRNA. ACCESSION XM_021469725 VERSION XM_021469725.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7)...
Synonym: hoxc4; z-96; zgc:110513
XM_021469725.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio prospero homeobox 2 (prox2), mRNA. (2435 bp)
LOCUS NM_001128292 2435 bp mRNA linear VRT 14-OCT-2021 DEFINITION Danio rerio prospero homeobox 2 (prox2), mRNA. ACCESSION NM_001128292 XM_001919487 VERSION NM_001128292.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF517402.2. On Sep 16, 2008 this sequence version...
NM_001128292.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox C5a (hoxc5a), transcript variant X1, mRNA. (930 bp)
LOCUS XM_021469726 930 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox C5a (hoxc5a), transcript variant X1, mRNA. ACCESSION XM_021469726 VERSION XM_021469726.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7)...
Synonym: hox-3.4; hoxc5; z-142; ZF-25
XM_021469726.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.1 (pknox1.1), transcript variant X1, mRNA. (2629 bp)
LOCUS XM_017357727 2629 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.1 (pknox1.1), transcript variant X1, mRNA. ACCESSION XM_017357727 VERSION XM_017357727.2 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 618..875 /gene="pknox1.1" /gene_synonym="fc13f10; prep1; prep1.1; wu:fc13f10" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order...
Synonym: fc13f10; prep1; prep1.1; wu:fc13f10
XM_017357727.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 4b (six4b), mRNA. (2511 bp)
LOCUS NM_131717 2511 bp mRNA linear VRT 16-OCT-2021 DEFINITION Danio rerio SIX homeobox 4b (six4b), mRNA. ACCESSION NM_131717 XM_009294646 VERSION NM_131717.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 4 (bases 1 to 2511) AUTHORS Ogawa Y, Shiraki T, Kojima D and Fukada Y. TITLE Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish JOURNAL Proc Biol Sci 282 (1812), 20150659 (2015) PUBMED 26180064...
Synonym: six4.1; six4a; six8; wu:fj32d01
NM_131717.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ADNP homeobox 2b (adnp2b), mRNA. (3640 bp)
LOCUS NM_001080013 3640 bp mRNA linear VRT 14-OCT-2021 DEFINITION Danio rerio ADNP homeobox 2b (adnp2b), mRNA. ACCESSION NM_001080013 XM_687520 VERSION NM_001080013.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125828.1. On Mar 11, 2007 this sequence version replaced XM...
Synonym: si:ch211-129n15.3; wu:fc49c08; wu:fi26a03; zgc:152871
NM_001080013.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X2, mRNA. (5274 bp)
LOCUS XM_005171012 5274 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X2, mRNA. ACCESSION XM_005171012 VERSION XM_005171012.3 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 412..669 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(967..981,985..987,1045..1047,1063..1065,1102..1104, 1108..1113,1120..1125,1129..1137) /gene="pknox1.2" /note="DNA binding site...
XM_005171012.3 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox C10a (hoxc10a), transcript variant X2, mRNA. (2893 bp)
LOCUS XM_021469717 2893 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox C10a (hoxc10a), transcript variant X2, mRNA. ACCESSION XM_021469717 VERSION XM_021469717.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7)...
Synonym: hoxc10; z-81
XM_021469717.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio engrailed homeobox 1b (en1b), transcript variant X1, mRNA. (1693 bp)
LOCUS XM_009305884 1693 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio engrailed homeobox 1b (en1b), transcript variant X1, mRNA. ACCESSION XM_009305884 VERSION XM_009305884.3 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence...
Synonym: eng4; wu:fc84e11; zgc:113499
XM_009305884.3 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X4, mRNA. (1257 bp)
LOCUS XM_021468133 1257 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X4, mRNA. ACCESSION XM_021468133 VERSION XM_021468133.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7)...
Synonym: hoxx4; hoxzf26; im:6899783; ns:zf-es36
XM_021468133.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X3, mRNA. (1263 bp)
LOCUS XM_021468132 1263 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X3, mRNA. ACCESSION XM_021468132 VERSION XM_021468132.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7)...
Synonym: hoxx4; hoxzf26; im:6899783; ns:zf-es36
XM_021468132.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK2 homeobox 4b (nkx2.4b), mRNA. (1175 bp)
LOCUS NM_131589 1175 bp mRNA linear VRT 20-FEB-2022 DEFINITION Danio rerio NK2 homeobox 4b (nkx2.4b), mRNA. ACCESSION NM_131589 VERSION NM_131589.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF253054.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: nk2.1a; nkx2.1; nkx2.1a; nkx2.4a; titf1; titf1a
NM_131589.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox protein HMX3-B-like (LOC110438420), mRNA. (462 bp)
LOCUS XM_021470811 462 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox protein HMX3-B-like (LOC110438420), mRNA. ACCESSION XM_021470811 VERSION XM_021470811.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq; includes ab initio. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence...
XM_021470811.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X2, mRNA. (1544 bp)
LOCUS XM_009294170 1544 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X2, mRNA. ACCESSION XM_009294170 VERSION XM_009294170.3 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7)...
Synonym: hoxx4; hoxzf26; im:6899783; ns:zf-es36
XM_009294170.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK6 homeobox 3 (nkx6.3), mRNA. (819 bp)
LOCUS NM_001166140 819 bp mRNA linear VRT 06-JUL-2017 DEFINITION Danio rerio NK6 homeobox 3 (nkx6.3), mRNA. ACCESSION NM_001166140 XM_679812 VERSION NM_001166140.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX571947.8. On May 21, 2010 this sequence version replaced XM...
NM_001166140.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA. (1389 bp)
LOCUS XM_021468131 1389 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox A4a (hoxa4a), transcript variant X1, mRNA. ACCESSION XM_021468131 VERSION XM_021468131.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7)...
Synonym: hoxx4; hoxzf26; im:6899783; ns:zf-es36
XM_021468131.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio distal-less homeobox 1a (dlx1a), transcript variant X1, mRNA. (2615 bp)
LOCUS XM_005167400 2615 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio distal-less homeobox 1a (dlx1a), transcript variant X1, mRNA. ACCESSION XM_005167400 VERSION XM_005167400.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence...
Synonym: dlx1; zgc:111939
XM_005167400.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio iroquois homeobox 5a (irx5a), transcript variant X1, mRNA. (2041 bp)
LOCUS XM_021477593 2041 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio iroquois homeobox 5a (irx5a), transcript variant X1, mRNA. ACCESSION XM_021477593 VERSION XM_021477593.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 787..903 /gene="irx5a" /gene_synonym="iro5" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN //...
Synonym: iro5
XM_021477593.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio HESX homeobox 1 (hesx1), mRNA. (717 bp)
LOCUS NM_131349 717 bp mRNA linear VRT 07-MAY-2023 DEFINITION Danio rerio HESX homeobox 1 (hesx1), mRNA. ACCESSION NM_131349 VERSION NM_131349.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U65433.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: Anf; danf; zanf
NM_131349.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio mix-type homeobox gene 1 (mxtx1), mRNA. (1867 bp)
LOCUS NM_131560 1867 bp mRNA linear VRT 16-OCT-2021 DEFINITION Danio rerio mix-type homeobox gene 1 (mxtx1), mRNA. ACCESSION NM_131560 XM_001923892 VERSION NM_131560.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT573233.10. On or before Jun 5, 2009 this sequence version...
Synonym: mtx1; sb:cb779
NM_131560.3 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X3, mRNA. (3757 bp)
LOCUS XM_021480022 3757 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X3, mRNA. ACCESSION XM_021480022 VERSION XM_021480022.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7)...
Synonym: cb249; Hoxa-1; hoxa1; id:ibd5001
XM_021480022.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X4, mRNA. (3968 bp)
LOCUS XM_021480023 3968 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X4, mRNA. ACCESSION XM_021480023 VERSION XM_021480023.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7)...
Synonym: cb249; Hoxa-1; hoxa1; id:ibd5001
XM_021480023.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X5, mRNA. (3497 bp)
LOCUS XM_021480024 3497 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X5, mRNA. ACCESSION XM_021480024 VERSION XM_021480024.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7)...
Synonym: cb249; Hoxa-1; hoxa1; id:ibd5001
XM_021480024.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio dorsal root ganglia homeobox (drgx), mRNA. (864 bp)
LOCUS NM_001037105 864 bp mRNA linear VRT 09-JUL-2023 DEFINITION Danio rerio dorsal root ganglia homeobox (drgx), mRNA. ACCESSION NM_001037105 XM_683802 VERSION NM_001037105.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY753211.1. On Nov 6, 2005 this sequence version...
Synonym: prrxl1
NM_001037105.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio short stature homeobox 2 (shox2), transcript variant X3, mRNA. (2089 bp)
LOCUS XM_021481367 2089 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio short stature homeobox 2 (shox2), transcript variant X3, mRNA. ACCESSION XM_021481367 VERSION XM_021481367.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence...
Synonym: zgc:65884; zgc:77344
XM_021481367.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 1b (irx1b), mRNA. (1764 bp)
LOCUS NM_131823 1764 bp mRNA linear VRT 29-MAY-2023 DEFINITION Danio rerio iroquois homeobox 1b (irx1b), mRNA. ACCESSION NM_131823 VERSION NM_131823.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii...factor [Transcription]; Region: COG5576" /db_xref="CDD:227863" misc_feature 532..648 /gene="irx1b" /gene_synonym="iro1; ziro1" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 985..1038 /gene="irx1b" /gene_synonym="iro1; ziro1" /note="Motif in Iroquois-...
Synonym: iro1; ziro1
NM_131823.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox A1a (hoxa1a), transcript variant X1, mRNA. (5400 bp)
LOCUS XM_017352263 5400 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox A1a (hoxa1a), transcript variant X1, mRNA. ACCESSION XM_017352263 VERSION XM_017352263.2 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7)...
Synonym: Hox-a1; hoxa3a; id:ibd3526; z-4
XM_017352263.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio LIM homeobox transcription factor 1, alpha (lmx1a), transcript variant X3, mRNA. (1502 bp)
LOCUS XM_005160714 1502 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio LIM homeobox transcription factor 1, alpha (lmx1a), transcript variant X3, mRNA. ACCESSION XM_005160714 VERSION XM_005160714.3 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a...
Synonym: si:ch211-260g14.3
XM_005160714.3 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio LIM homeobox transcription factor 1, alpha (lmx1a), transcript variant X2, mRNA. (1508 bp)
LOCUS XM_005160713 1508 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio LIM homeobox transcription factor 1, alpha (lmx1a), transcript variant X2, mRNA. ACCESSION XM_005160713 VERSION XM_005160713.3 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a...
Synonym: si:ch211-260g14.3
XM_005160713.3 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X6, mRNA. (3780 bp)
LOCUS XM_017358429 3780 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X6, mRNA. ACCESSION XM_017358429 VERSION XM_017358429.2 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7)...
Synonym: cb249; Hoxa-1; hoxa1; id:ibd5001
XM_017358429.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X2, mRNA. (3786 bp)
LOCUS XM_005156266 3786 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio homeobox B1b (hoxb1b), transcript variant X2, mRNA. ACCESSION XM_005156266 VERSION XM_005156266.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7)...
Synonym: cb249; Hoxa-1; hoxa1; id:ibd5001
XM_005156266.4 - Danio rerio (zebrafish) - NCBI - UCSC

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Redirect URI : http://ggrna.dbcls.jp/dr/homeobox
lang : en | div : | spe : dr | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.160 | 0.160 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=0&format=json
0.291 | 0.131 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.296 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]