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2025-10-31 01:21:21, GGRNA : RefSeq release 232 (Sep, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Danio rerio iroquois homeobox 7 (irx7), mRNA. (1207 bp)
iroquois homeobox protein 7" /codon_start=1 /product="iroquois homeobox 7" /protein_id="NP_571956.1" /db_xref="GeneID:140746" /db_xref="ZFIN:ZDB-GENE-020103-1" /translation="MPASSTGFANFFMDRNINMPAGYQLLGCPPGMQQPPPHLVGMAGMPLPFSGIPGYSFIPYPHPGHMAHISNSYDLKAASPYHQALLGRGGPYYTPYRPIPADDPSRVTKVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRVSWASKGKSDEEDEEEEGESEEEGSLRKGTEDEDEIDPQTVDDEDEEDVVVSKSVEHRLAGGLEQQKESDKSDTLTKRESYKQIADVQKPKIWSLAETATSDIVKKPSDLKHLQTSPDFGQWWAGWPSRDSYSPVNLSTHDLLKQSQ" misc_feature 391..507 /gene="irx7" /gene_synonym="cb263; iro7; zgc:109841; ziro7" /note="Homeobox KN domain;...
Synonym: cb263; iro7; zgc:109841; ziro7
NM_131881.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 1, mRNA. (1639 bp)
LOCUS NM_0066 1639 bp mRNA linear VRT 08-OCT-2023 DEFINITION Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 1, mRNA. ACCESSION NM_0066 XM_679993 XM_702667 XM_702669 VERSION NM_0066.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC153953.1. On or before Dec...
Synonym: fi48a12; wu:fi48a12; zgc:171531
NM_001111166.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 5b (irx5b), mRNA. (1231 bp)
LOCUS NM_001001405 1231 bp mRNA linear VRT 04-DEC-2022 DEFINITION Danio rerio iroquois homeobox 5b (irx5b), mRNA. ACCESSION NM_001001405 VERSION NM_001001405.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 407..523 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 836..889 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Motif in...
Synonym: iro5b; ziro5b
NM_001001405.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio even-skipped homeobox 2 (evx2), mRNA. (3334 bp)
LOCUS NM_131232 3334 bp mRNA linear VRT 04-DEC-2023 DEFINITION Danio rerio even-skipped homeobox 2 (evx2), mRNA. ACCESSION NM_131232 VERSION NM_131232.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057443.1. On Jan 25, 2004 this sequence version replaced NM_131232.1....
Synonym: Evx-2
NM_131232.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 9 (six9), mRNA. (794 bp)
LOCUS NM_001130608 794 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio SIX homeobox 9 (six9), mRNA. ACCESSION NM_001130608 XM_684623 VERSION NM_001130608.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163024.1. On May 28, 2009 this sequence version replaced XM...
Synonym: si:dkey-149j18.3
NM_001130608.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio mohawk homeobox a (mkxa), mRNA. (2945 bp)
LOCUS NM_001098733 2945 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio mohawk homeobox a (mkxa), mRNA. ACCESSION NM_001098733 XM_678274 VERSION NM_001098733.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 462..578 /gene="mkxa" /gene_synonym="irxl1b" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 386..545 /gene="mkxa" /gene_synonym="irxl1b" /inference="alignment:Splign:2.1.0"...
Synonym: irxl1b
NM_001098733.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio posterior neuron-specific homeobox (pnx), mRNA. (867 bp)
LOCUS NM_178302 867 bp mRNA linear VRT 28-APR-2025 DEFINITION Danio rerio posterior neuron-specific homeobox (pnx), mRNA. ACCESSION NM_178302 VERSION NM_178302.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB067731.1. On Jun 3, 2003 this sequence version replaced NM...
NM_178302.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio mesenchyme homeobox 2b (meox2b), mRNA. (870 bp)
LOCUS NM_001045124 870 bp mRNA linear VRT 02-APR-2025 DEFINITION Danio rerio mesenchyme homeobox 2b (meox2b), mRNA. ACCESSION NM_001045124 XM_690253 VERSION NM_001045124.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX957323.7. On Sep 1, 2006 this sequence version...
Synonym: si:ch211-127c19.1
NM_001045124.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio H6 family homeobox 1 (hmx1), mRNA. (849 bp)
LOCUS NM_001113526 849 bp mRNA linear VRT 02-APR-2025 DEFINITION Danio rerio H6 family homeobox 1 (hmx1), mRNA. ACCESSION NM_001113526 XM_001334293 VERSION NM_001113526.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU050652.1. On Jan 17, 2008 this sequence version...
Synonym: im:7155045; Nkx5-3; nkx5.3; zgc:172164
NM_001113526.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio POU class 4 homeobox 4 (pou4f4), mRNA. (2330 bp)
LOCUS NM_001080058 2330 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio POU class 4 homeobox 4 (pou4f4), mRNA. ACCESSION NM_001080058 XM_695754 VERSION NM_001080058.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC128835.1. On Mar 11, 2007 this sequence version...
Synonym: zgc:158291
NM_001080058.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ADNP homeobox 2a (adnp2a), mRNA. (3734 bp)
LOCUS NM_001098265 3734 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio ADNP homeobox 2a (adnp2a), mRNA. ACCESSION NM_001098265 XM_001345830 VERSION NM_001098265.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC139614.1. On May 25, 2007 this sequence version replaced...
Synonym: adnp2; im:6912290; wu:fc45g06; znf508
NM_001098265.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 3b (six3b), mRNA. (1722 bp)
LOCUS NM_131363 1722 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio SIX homeobox 3b (six3b), mRNA. ACCESSION NM_131363 VERSION NM_131363.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF030281.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: cb347; SIX3; six3.2; six6
NM_131363.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B8b (hoxb8b), mRNA. (1037 bp)
LOCUS NM_131181 1037 bp mRNA linear VRT 28-APR-2025 DEFINITION Danio rerio homeobox B8b (hoxb8b), mRNA. ACCESSION NM_131181 XM_686884 VERSION NM_131181.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162153.1. On May 8, 2009 this sequence version replaced XM_686884.3....
Synonym: hoxa8; z-9
NM_131181.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio caudal type homeobox 1a (cdx1a), mRNA. (2245 bp)
LOCUS NM_212836 2245 bp mRNA linear VRT 28-SEP-2024 DEFINITION Danio rerio caudal type homeobox 1a (cdx1a), mRNA. ACCESSION NM_212836 VERSION NM_212836.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115217.1. On Mar 25, 2007 this sequence version replaced NM_212836.2....
Synonym: cdx2
NM_212836.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio H6 family homeobox 4 (hmx4), mRNA. (1446 bp)
LOCUS NM_001045371 1446 bp mRNA linear VRT 08-JUN-2024 DEFINITION Danio rerio H6 family homeobox 4 (hmx4), mRNA. ACCESSION NM_001045371 VERSION NM_001045371.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122454.1. Publication Note: This RefSeq record includes a subset of...
Synonym: Hmx1; soho; wu:fc21b03; zgc:154104
NM_001045371.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 2b (six2b), mRNA. (966 bp)
LOCUS NM_001128734 966 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio SIX homeobox 2b (six2b), mRNA. ACCESSION NM_001128734 XM_689724 VERSION NM_001128734.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 966) AUTHORS Ogawa Y, Shiraki T, Kojima D and Fukada Y. TITLE Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish JOURNAL Proc Biol Sci 282 (1812), 20150659 (2015) PUBMED 26180064...
Synonym: zgc:195089; zgc:195096
NM_001128734.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 1a (six1a), mRNA. (1610 bp)
LOCUS NM_001009904 1610 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio SIX homeobox 1a (six1a), mRNA. ACCESSION NM_001009904 VERSION NM_001009904.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076015.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: six1b; six2; zgc:92332
NM_001009904.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B5b (hoxb5b), mRNA. (1656 bp)
LOCUS NM_131537 1656 bp mRNA linear VRT 28-APR-2025 DEFINITION Danio rerio homeobox B5b (hoxb5b), mRNA. ACCESSION NM_131537 VERSION NM_131537.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078285.1. On Aug 31, 2012 this sequence version replaced NM_131537.2. Publication...
Synonym: hoxa5; hoxb5-like; hoxzf54; id:ibd2566; z-2; ZF-54; ZF54; zgc:101134
NM_131537.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio diencephalon/mesencephalon homeobox 1b (dmbx1b), mRNA. (1430 bp)
LOCUS NM_001017625 1430 bp mRNA linear VRT 27-APR-2025 DEFINITION Danio rerio diencephalon/mesencephalon homeobox 1b (dmbx1b), mRNA. ACCESSION NM_001017625 VERSION NM_001017625.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ317638.1. On Jan 5, 2006 this sequence version...
Synonym: mbx2; zgc:112395
NM_001017625.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio gastrulation brain homeobox 2 (gbx2), mRNA. (2113 bp)
in zebrafish JOURNAL Dev Biol 278 (2), 415-427 (2005) PUBMED 15680360 REFERENCE 7 (bases 1 to 2113) AUTHORS Rhinn,M., Lun,K., Werner,M., Simeone,A. and Brand,M. TITLE Isolation and expression of the homeobox gene Gbx1 during mouse development JOURNAL Dev Dyn 229 (2), 334-339 (2004) PUBMED 14745958 REFERENCE 8 (bases 1 to 2113) AUTHORS Kikuta,H., Kanai,M., Ito,Y. and Yamasu,K. TITLE gbx2 Homeobox gene is required for the maintenance of the isthmic region in the zebrafish embryonic brain JOURNAL Dev Dyn 228 (3), 433-450 (2003) PUBMED 14579382 REMARK GeneRIF: Ectopic expression of gbx2 by mRNA...
Synonym: fd07f12; gbx-2; wu:fd07f12
NM_152964.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio dorsal root ganglia homeobox (drgx), mRNA. (864 bp)
LOCUS NM_001037105 864 bp mRNA linear VRT 02-APR-2025 DEFINITION Danio rerio dorsal root ganglia homeobox (drgx), mRNA. ACCESSION NM_001037105 XM_683802 VERSION NM_001037105.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY753211.1. On Nov 6, 2005 this sequence version...
Synonym: prrxl1
NM_001037105.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B6a (hoxb6a), mRNA. (687 bp)
LOCUS NM_131119 687 bp mRNA linear VRT 02-APR-2025 DEFINITION Danio rerio homeobox B6a (hoxb6a), mRNA. ACCESSION NM_131119 VERSION NM_131119.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X17267.1. Publication Note: This RefSeq record includes a subset of the publications...
Synonym: hox-2.2; hox-B6; hoxb6; z-39; ZF-22; ZF22
NM_131119.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. (3252 bp)
LOCUS NM_198813 3252 bp mRNA linear VRT 02-APR-2025 DEFINITION Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. ACCESSION NM_198813 VERSION NM_198813.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY311506.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: tix1; zgc:110489; zhx3
NM_198813.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox D13a (hoxd13a), mRNA. (1196 bp)
LOCUS NM_131169 1196 bp mRNA linear VRT 06-APR-2025 DEFINITION Danio rerio homeobox D13a (hoxd13a), mRNA. ACCESSION NM_131169 VERSION NM_131169.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091996.1. On Aug 30, 2012 this sequence version replaced NM_131169.2....
Synonym: hoxd-13; hoxd13; zgc:110511
NM_131169.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio prospero homeobox 2 (prox2), mRNA. (2435 bp)
LOCUS NM_001128292 2435 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio prospero homeobox 2 (prox2), mRNA. ACCESSION NM_001128292 XM_001919487 VERSION NM_001128292.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF517402.2. On Sep 16, 2008 this sequence version...
NM_001128292.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio paired like homeobox 2Ba (phox2ba), mRNA. (872 bp)
LOCUS NM_001145703 872 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio paired like homeobox 2Ba (phox2ba), mRNA. ACCESSION NM_001145703 XM_001335362 VERSION NM_001145703.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX323984.7. On Mar 11, 2009 this sequence version...
Synonym: si:ch211-157h5.5
NM_001145703.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio engrailed homeobox 2b (en2b), mRNA. (1823 bp)
LOCUS NM_131040 1823 bp mRNA linear VRT 27-APR-2025 DEFINITION Danio rerio engrailed homeobox 2b (en2b), mRNA. ACCESSION NM_131040 VERSION NM_131040.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X68447.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: en3; ENG-3; eng2b; eng3; ZF-EN-1
NM_131040.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio GS homeobox 1 (gsx1), mRNA. (1401 bp)
LOCUS NM_001012251 1401 bp mRNA linear VRT 07-MAY-2024 DEFINITION Danio rerio GS homeobox 1 (gsx1), mRNA. ACCESSION NM_001012251 VERSION NM_001012251.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY486348.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: gsh1; im:7138106; zgc:110817
NM_001012251.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 2, mRNA. (1350 bp)
LOCUS NM_001160384 1350 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 2, mRNA. ACCESSION NM_001160384 XM_001923297 XM_001923299 XM_001923300 VERSION NM_001160384.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from...
Synonym: fi48a12; wu:fi48a12; zgc:171531
NM_001160384.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B5a (hoxb5a), mRNA. (1800 bp)
LOCUS NM_131101 1800 bp mRNA linear VRT 28-APR-2025 DEFINITION Danio rerio homeobox B5a (hoxb5a), mRNA. ACCESSION NM_131101 VERSION NM_131101.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071493.1. On Oct 16, 2004 this sequence version replaced NM_131101.1. Publication...
Synonym: hox-2.1; hox-B5; hoxb5; wu:fc38c09; z-18; ZF-21; ZF21
NM_131101.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox A13b (hoxa13b), mRNA. (1542 bp)
LOCUS NM_131194 1542 bp mRNA linear VRT 06-APR-2025 DEFINITION Danio rerio homeobox A13b (hoxa13b), mRNA. ACCESSION NM_131194 XM_005157955 VERSION NM_131194.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC090761.1. On or before Jun 18, 2015 this sequence version replaced...
Synonym: Hoxa-13; HOXA13; wu:fa66g07; zgc:110514
NM_131194.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio zinc fingers and homeoboxes 2a (zhx2a), mRNA. (3741 bp)
LOCUS NM_198814 3741 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio zinc fingers and homeoboxes 2a (zhx2a), mRNA. ACCESSION NM_198814 VERSION NM_198814.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC141782.1. On May 28, 2007 this sequence version replaced NM...
Synonym: ZHX1; zhx2
NM_198814.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio distal-less homeobox 6a (dlx6a), mRNA. (1393 bp)
LOCUS NM_131323 1393 bp mRNA linear VRT 27-APR-2025 DEFINITION Danio rerio distal-less homeobox 6a (dlx6a), mRNA. ACCESSION NM_131323 XM_694106 VERSION NM_131323.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U67844.1. On Jul 6, 2005 this sequence version replaced XM...
Synonym: dlx6
NM_131323.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox A9b (hoxa9b), mRNA. (777 bp)
LOCUS NM_131533 777 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio homeobox A9b (hoxa9b), mRNA. ACCESSION NM_131533 VERSION NM_131533.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF071249.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: Hoxa-9; zgc:110504
NM_131533.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox A11b (hoxa11b), mRNA. (852 bp)
LOCUS NM_131147 852 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio homeobox A11b (hoxa11b), mRNA. ACCESSION NM_131147 VERSION NM_131147.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF287137.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: Hoxa-11; hoxa11; im:7142641
NM_131147.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox C4a (hoxc4a), mRNA. (1500 bp)
LOCUS NM_131122 1500 bp mRNA linear VRT 25-FEB-2025 DEFINITION Danio rerio homeobox C4a (hoxc4a), mRNA. ACCESSION NM_131122 VERSION NM_131122.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092923.1. On May 1, 2005 this sequence version replaced NM_131122.1. Publication...
Synonym: hoxc4; z-96; zgc:110513
NM_131122.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ADNP homeobox 2b (adnp2b), mRNA. (3640 bp)
LOCUS NM_001080013 3640 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio ADNP homeobox 2b (adnp2b), mRNA. ACCESSION NM_001080013 XM_687520 VERSION NM_001080013.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125828.1. On Mar 11, 2007 this sequence version replaced XM...
Synonym: si:ch211-129n15.3; wu:fc49c08; wu:fi26a03; zgc:152871
NM_001080013.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 5a (irx5a), mRNA. (1922 bp)
LOCUS NM_001045227 1922 bp mRNA linear VRT 27-APR-2025 DEFINITION Danio rerio iroquois homeobox 5a (irx5a), mRNA. ACCESSION NM_001045227 NM_131824 XM_681897 XM_703534 XM_703535 XM_703536 VERSION NM_001045227.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 671..787 /gene="irx5a" /gene_synonym="iro5" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 806..1219 /gene="irx5a" /gene_synonym="iro5" /note="propagated from...
Synonym: iro5
NM_001045227.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox D4a (hoxd4a), mRNA. (1247 bp)
LOCUS NM_001126445 1247 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio homeobox D4a (hoxd4a), mRNA. ACCESSION NM_001126445 NM_130757 VERSION NM_001126445.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162966.1. On or before May 16, 2009 this sequence version...
Synonym: etID309823.9; etID37000.9; fb36c05; hoxd4; wu:fb36c05
NM_001126445.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox containing 1a (hmbox1a), mRNA. (1881 bp)
LOCUS NM_001030264 1881 bp mRNA linear VRT 25-FEB-2025 DEFINITION Danio rerio homeobox containing 1a (hmbox1a), mRNA. ACCESSION NM_001030264 XM_695104 VERSION NM_001030264.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097126.1. On Aug 6, 2005 this sequence version...
Synonym: hmbox1; zgc:114064
NM_001030264.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio empty spiracles homeobox 3 (emx3), mRNA. (1144 bp)
LOCUS NM_131279 1144 bp mRNA linear VRT 07-DEC-2024 DEFINITION Danio rerio empty spiracles homeobox 3 (emx3), mRNA. ACCESSION NM_131279 VERSION NM_131279.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092925.1. On Apr 20, 2005 this sequence version replaced NM_131279.1....
Synonym: emx1; zgc:110517
NM_131279.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox A2b (hoxa2b), mRNA. (1797 bp)
LOCUS NM_131106 1797 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio homeobox A2b (hoxa2b), mRNA. ACCESSION NM_131106 VERSION NM_131106.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF307010.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: hoxa2; Z-75
NM_131106.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 6a (six6a), mRNA. (1317 bp)
LOCUS NM_201105 1317 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio SIX homeobox 6a (six6a), mRNA. ACCESSION NM_201105 VERSION NM_201105.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii;...PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 1317) AUTHORS Ogawa Y, Shiraki T, Kojima D and Fukada Y. TITLE Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish JOURNAL Proc Biol Sci 282 (1812), 20150659 (2015) PUBMED 26180064...
Synonym: Six6; zgc:63871
NM_201105.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 2a (six2a), mRNA. (1635 bp)
LOCUS NM_131783 1635 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio SIX homeobox 2a (six2a), mRNA. ACCESSION NM_131783 VERSION NM_131783.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii;...PUBMED 27189481 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 1635) AUTHORS Ogawa,Y., Shiraki,T., Kojima,D. and Fukada,Y. TITLE Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish JOURNAL Proc Biol Sci 282 (1812), 20150659 (2015) PUBMED 26180064...
Synonym: six2.1; wu:fj04e08; zgc:91945
NM_131783.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox C8a (hoxc8a), mRNA. (2320 bp)
LOCUS NM_001005771 2320 bp mRNA linear VRT 25-FEB-2025 DEFINITION Danio rerio homeobox C8a (hoxc8a), mRNA. ACCESSION NM_001005771 VERSION NM_001005771.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC080255.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: cb341; hoxc8; z-179; zgc:91832
NM_001005771.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio HOP homeobox (hopx), mRNA. (1180 bp)
LOCUS NM_198209 1180 bp mRNA linear VRT 27-APR-2025 DEFINITION Danio rerio HOP homeobox (hopx), mRNA. ACCESSION NM_198209 VERSION NM_198209.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096856.1. On Jun 12, 2005 this sequence version replaced NM_198209.1. ##Evidence-...
Synonym: hop
NM_198209.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ladybird homeobox 1a (lbx1a), mRNA. (810 bp)
LOCUS NM_001025532 810 bp mRNA linear VRT 02-APR-2025 DEFINITION Danio rerio ladybird homeobox 1a (lbx1a), mRNA. ACCESSION NM_001025532 XM_687459 VERSION NM_001025532.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL928816.2. On Jul 16, 2005 this sequence version replaced...
Synonym: dZ265N4.1; lbx1b; si:busm1-265n4.1; si:ch211-103o12.1
NM_001025532.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio gastrulation brain homeobox 1 (gbx1), mRNA. (1837 bp)
LOCUS NM_174861 1837 bp mRNA linear VRT 23-MAR-2025 DEFINITION Danio rerio gastrulation brain homeobox 1 (gbx1), mRNA. ACCESSION NM_174861 VERSION NM_174861.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 1837) AUTHORS Kikuta,H., Kanai,M., Ito,Y. and Yamasu,K. TITLE gbx2 Homeobox gene is required for the maintenance of the isthmic region in the zebrafish embryonic brain JOURNAL Dev Dyn 228 (3), 433-450 (2003) PUBMED 14579382 REFERENCE 7...
Synonym: cb619; fj77a06; wu:fj77a06
NM_174861.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 4a (irx4a), mRNA. (2101 bp)
LOCUS NM_205698 2101 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio iroquois homeobox 4a (irx4a), mRNA. ACCESSION NM_205698 VERSION NM_205698.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii...contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 742..858 /gene="irx4a" /gene_synonym="zgc:77362; ziro4a" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 322..561 /gene="irx4a" /gene_synonym="zgc:77362; ziro4a" /inference="alignment:...
Synonym: zgc:77362; ziro4a
NM_205698.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox C13b (hoxc13b), mRNA. (1582 bp)
LOCUS NM_131546 1582 bp mRNA linear VRT 12-JAN-2025 DEFINITION Danio rerio homeobox C13b (hoxc13b), mRNA. ACCESSION NM_131546 VERSION NM_131546.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC139597.1. On Apr 22, 2007 this sequence version replaced NM_131546.1....
Synonym: hoxf13
NM_131546.2 - Danio rerio (zebrafish) - NCBI - UCSC

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Redirect URI : https://ggrna.dbcls.jp/dr/homeobox
lang : en | div : | spe : dr | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.348 | 0.348 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=0&format=json
0.412 | 0.064 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.417 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]