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2025-04-24 04:31:23, GGRNA : RefSeq release 229 (Mar, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Danio rerio dorsal root ganglia homeobox (drgx), mRNA. (864 bp)
LOCUS NM_001037105 864 bp mRNA linear VRT 09-JUL-2023 DEFINITION Danio rerio dorsal root ganglia homeobox (drgx), mRNA. ACCESSION NM_001037105 XM_683802 VERSION NM_001037105.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY753211.1. On Nov 6, 2005 this sequence version...
Synonym: prrxl1
NM_001037105.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio posterior neuron-specific homeobox (pnx), mRNA. (867 bp)
LOCUS NM_178302 867 bp mRNA linear VRT 04-FEB-2024 DEFINITION Danio rerio posterior neuron-specific homeobox (pnx), mRNA. ACCESSION NM_178302 VERSION NM_178302.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB067731.1. On Jun 3, 2003 this sequence version replaced NM...
NM_178302.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 7 (irx7), mRNA. (1207 bp)
iroquois homeobox protein 7" /codon_start=1 /product="iroquois homeobox 7" /protein_id="NP_571956.1" /db_xref="GeneID:140746" /db_xref="ZFIN:ZDB-GENE-020103-1" /translation="MPASSTGFANFFMDRNINMPAGYQLLGCPPGMQQPPPHLVGMAGMPLPFSGIPGYSFIPYPHPGHMAHISNSYDLKAASPYHQALLGRGGPYYTPYRPIPADDPSRVTKVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRVSWASKGKSDEEDEEEEGESEEEGSLRKGTEDEDEIDPQTVDDEDEEDVVVSKSVEHRLAGGLEQQKESDKSDTLTKRESYKQIADVQKPKIWSLAETATSDIVKKPSDLKHLQTSPDFGQWWAGWPSRDSYSPVNLSTHDLLKQSQ" misc_feature 391..507 /gene="irx7" /gene_synonym="cb263; iro7; zgc:109841; ziro7" /note="Homeobox KN domain;...
Synonym: cb263; iro7; zgc:109841; ziro7
NM_131881.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. (3252 bp)
LOCUS NM_198813 3252 bp mRNA linear VRT 02-OCT-2022 DEFINITION Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. ACCESSION NM_198813 VERSION NM_198813.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY311506.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: tix1; zgc:110489; zhx3
NM_198813.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio POU class 3 homeobox 2a (pou3f2a), mRNA. (2712 bp)
LOCUS NM_131289 2712 bp mRNA linear VRT 15-MAY-2023 DEFINITION Danio rerio POU class 3 homeobox 2a (pou3f2a), mRNA. ACCESSION NM_131289 VERSION NM_131289.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC129152.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: brn-1.2; brn1.2; id:ibd5088
NM_131289.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio iroquois homeobox 5b (irx5b), mRNA. (1231 bp)
LOCUS NM_001001405 1231 bp mRNA linear VRT 04-DEC-2022 DEFINITION Danio rerio iroquois homeobox 5b (irx5b), mRNA. ACCESSION NM_001001405 VERSION NM_001001405.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 407..523 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 836..889 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Motif in...
Synonym: iro5b; ziro5b
NM_001001405.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 1, mRNA. (1639 bp)
LOCUS NM_0066 1639 bp mRNA linear VRT 08-OCT-2023 DEFINITION Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 1, mRNA. ACCESSION NM_0066 XM_679993 XM_702667 XM_702669 VERSION NM_0066.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC153953.1. On or before Dec...
Synonym: fi48a12; wu:fi48a12; zgc:171531
NM_001111166.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ALX homeobox 4b (alx4b), mRNA. (1719 bp)
LOCUS NM_001310078 1719 bp mRNA linear VRT 23-SEP-2023 DEFINITION Danio rerio ALX homeobox 4b (alx4b), mRNA. ACCESSION NM_001310078 VERSION NM_001310078.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU929116.4, EH456049.1, CU929277.10 and EH481782.1. Sequence Note: This...
Synonym: im:7142878; si:ch73-220n21.1; zgc:162606
NM_001310078.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio POU class 4 homeobox 2 (pou4f2), mRNA. (1493 bp)
LOCUS NM_212807 1493 bp mRNA linear VRT 16-APR-2022 DEFINITION Danio rerio POU class 4 homeobox 2 (pou4f2), mRNA. ACCESSION NM_212807 VERSION NM_212807.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY196176.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: brn-3b; brn3.2
NM_212807.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio even-skipped homeobox 2 (evx2), mRNA. (3334 bp)
LOCUS NM_131232 3334 bp mRNA linear VRT 04-DEC-2023 DEFINITION Danio rerio even-skipped homeobox 2 (evx2), mRNA. ACCESSION NM_131232 VERSION NM_131232.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057443.1. On Jan 25, 2004 this sequence version replaced NM_131232.1....
Synonym: Evx-2
NM_131232.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio muscle segment homeobox 3 (msx3), mRNA. (2029 bp)
LOCUS NM_131272 2029 bp mRNA linear VRT 12-JAN-2025 DEFINITION Danio rerio muscle segment homeobox 3 (msx3), mRNA. ACCESSION NM_131272 VERSION NM_131272.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL831745.3, EH593082.1, DT069743.1 and EH607545.1. On Aug 18, 2015 this...
Synonym: homeobox; msh-C; mshC; msx-c; msxc; zgc:86596
NM_131272.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NK6 homeobox 2 (nkx6.2), mRNA. (2282 bp)
LOCUS NM_001135784 2282 bp mRNA linear VRT 23-DEC-2023 DEFINITION Danio rerio NK6 homeobox 2 (nkx6.2), mRNA. ACCESSION NM_001135784 XM_689052 VERSION NM_001135784.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01085047.1 and EH578673.1. On Aug 10, 2010 this sequence...
NM_001135784.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ladybird homeobox 2 (lbx2), mRNA. (1764 bp)
LOCUS NM_001007134 1764 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio ladybird homeobox 2 (lbx2), mRNA. ACCESSION NM_001007134 VERSION NM_001007134.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075912.1. Publication Note: This RefSeq record includes a subset of...
Synonym: fc26c12; homeobox; lbx; lbx1; lbx1h; SI:zC207O21.2; wu:fc26c12; zgc:92170
NM_001007134.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 3b (six3b), mRNA. (1722 bp)
LOCUS NM_131363 1722 bp mRNA linear VRT 07-DEC-2024 DEFINITION Danio rerio SIX homeobox 3b (six3b), mRNA. ACCESSION NM_131363 VERSION NM_131363.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF030281.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: cb347; SIX3; six3.2; six6
NM_131363.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 1a (six1a), mRNA. (1610 bp)
LOCUS NM_001009904 1610 bp mRNA linear VRT 19-OCT-2024 DEFINITION Danio rerio SIX homeobox 1a (six1a), mRNA. ACCESSION NM_001009904 VERSION NM_001009904.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 1610) AUTHORS Ogawa,Y., Shiraki,T., Kojima,D. and Fukada,Y. TITLE Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish JOURNAL Proc Biol Sci 282 (1812), 20150659 (2015) PUBMED 26180064...
Synonym: six1b; six2; zgc:92332
NM_001009904.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B8b (hoxb8b), mRNA. (1037 bp)
LOCUS NM_131181 1037 bp mRNA linear VRT 07-DEC-2024 DEFINITION Danio rerio homeobox B8b (hoxb8b), mRNA. ACCESSION NM_131181 XM_686884 VERSION NM_131181.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162153.1. On May 8, 2009 this sequence version replaced XM_686884.3....
Synonym: hoxa8; z-9
NM_131181.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B6b (hoxb6b), mRNA. (987 bp)
LOCUS NM_131538 987 bp mRNA linear VRT 26-JAN-2025 DEFINITION Danio rerio homeobox B6b (hoxb6b), mRNA. ACCESSION NM_131538 XM_001335154 VERSION NM_131538.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC162890.1. On May 8, 2009 this sequence version replaced XM...
Synonym: hoxa7; z-5
NM_131538.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio caudal type homeobox 1a (cdx1a), mRNA. (2245 bp)
LOCUS NM_212836 2245 bp mRNA linear VRT 28-SEP-2024 DEFINITION Danio rerio caudal type homeobox 1a (cdx1a), mRNA. ACCESSION NM_212836 VERSION NM_212836.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115217.1. On Mar 25, 2007 this sequence version replaced NM_212836.2....
Synonym: cdx2
NM_212836.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio distal-less homeobox 2b (dlx2b), mRNA. (1526 bp)
less homeobox protein 2b; distal-less homeobox gene 5; distal-less homeobox gene 2b" /codon_start=1 /product="homeobox protein Dlx2b" /protein_id="NP_571372.1" /db_xref="GeneID:30557" /db_xref="ZFIN:ZDB-GENE-980526-18" /translation="MTAVLDSLGSDMHTNHITSSSFSTVHKSQDSPTLPVSTVTDSSFFSSSQTGHCAGTAYAQLASYSYHPGTVGNVHYSPKAYDLGYASSYGAYGTYGASSSPTPTEPEKEESEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKLWKNGEIPADQQVASGDSPSSSPPPQAGWDFPPNPTQNDGDTVSEQPTGPPNTTAPSFLTNYSWYSSTNAVTHLQPSTLIQPHHSSAMSTGTIF" misc_feature 205..426 /gene="dlx2b" /gene_synonym="dlx5" /note="Homeobox protein distal-...
Synonym: dlx5
NM_131297.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio distal-less homeobox 5a (dlx5a), mRNA. (1302 bp)
s homeobox protein 5a; distal-less homeobox gene 4; distal-less homeobox gene 5a" /codon_start=1 /product="homeobox protein Dlx5a" /protein_id="NP_571381.2" /db_xref="GeneID:30569" /db_xref="ZFIN:ZDB-GENE-990415-49" /translation="MTGVFDRRIPSIKPADFQNPFQLSTMHHPSQESPTLPESTATDSGYYSPAGGVHHGYCSPNSGTYGKPLNAYQYQYHGVNGSSGNYSAKSYPDYGSYSTAYHQYAGTYNRVQSQPSPQEKETAEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKRSKLKKIMKNGELPPEHSPSSSDPMACNSPQSPAVWDSQGPQRPHHQPQNINTAASTFLESASSSWYSSTGAMNSHLQAPGTLHSLALGSGTLY" misc_feature 263..523 /gene="dlx5a" /gene_synonym="dlx4; zgc:101787" /note="Homeobox...
Synonym: dlx4; zgc:101787
NM_131306.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio distal-less homeobox 4b (dlx4b), mRNA. (1265 bp)
LOCUS NM_131318 1265 bp mRNA linear VRT 19-JAN-2025 DEFINITION Danio rerio distal-less homeobox 4b (dlx4b), mRNA. ACCESSION NM_131318 VERSION NM_131318.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U67845.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: dlx7; fj03c01; wu:fj03c01; zgc:109858
NM_131318.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox C6a (hoxc6a), mRNA. (696 bp)
LOCUS NM_131123 696 bp mRNA linear VRT 25-FEB-2025 DEFINITION Danio rerio homeobox C6a (hoxc6a), mRNA. ACCESSION NM_131123 VERSION NM_131123.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF071265.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: HOX-C6; hoxc-6; hoxc6; ZF-61; zgc:101882
NM_131123.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B5b (hoxb5b), mRNA. (1656 bp)
LOCUS NM_131537 1656 bp mRNA linear VRT 26-JAN-2025 DEFINITION Danio rerio homeobox B5b (hoxb5b), mRNA. ACCESSION NM_131537 VERSION NM_131537.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078285.1. On Aug 31, 2012 this sequence version replaced NM_131537.2. Publication...
Synonym: hoxa5; hoxb5-like; hoxzf54; id:ibd2566; z-2; ZF-54; ZF54; zgc:101134
NM_131537.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio H6 family homeobox 3a (hmx3a), mRNA. (2058 bp)
LOCUS NM_131634 2058 bp mRNA linear VRT 12-OCT-2024 DEFINITION Danio rerio H6 family homeobox 3a (hmx3a), mRNA. ACCESSION NM_131634 VERSION NM_131634.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH585322.1 and AL773596.12. On Oct 15, 2015 this sequence version replaced NM...
Synonym: hmx3; Nkx5-1; nkx5.1; zgc:109845
NM_131634.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio mohawk homeobox a (mkxa), mRNA. (2945 bp)
LOCUS NM_001098733 2945 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio mohawk homeobox a (mkxa), mRNA. ACCESSION NM_001098733 XM_678274 VERSION NM_001098733.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 462..578 /gene="mkxa" /gene_synonym="irxl1b" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 386..545 /gene="mkxa" /gene_synonym="irxl1b" /inference="alignment:Splign:2.1.0"...
Synonym: irxl1b
NM_001098733.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X2, mRNA. (5359 bp)
LOCUS XM_068221694 5359 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X2, mRNA. ACCESSION XM_068221694 VERSION XM_068221694.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 498..755 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1053..1067,1071..1073,1131..1133,1149..1151, 1188..1190,1194..1199,1206..1211,1215..1223) /gene="pknox1.2" /note="DNA binding site...
XM_068221694.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X3, mRNA. (6065 bp)
LOCUS XM_068221695 6065 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X3, mRNA. ACCESSION XM_068221695 VERSION XM_068221695.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 1204..1461 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1759..1773,1777..1779,1837..1839,1855..1857, 1894..1896,1900..1905,1912..1917,1921..1929) /gene="pknox1.2" /note="DNA binding site...
XM_068221695.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X4, mRNA. (5997 bp)
LOCUS XM_068221696 5997 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X4, mRNA. ACCESSION XM_068221696 VERSION XM_068221696.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 1136..1393 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1691..1705,1709..1711,1769..1771,1787..1789, 1826..1828,1832..1837,1844..1849,1853..1861) /gene="pknox1.2" /note="DNA binding site...
XM_068221696.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X6, mRNA. (7773 bp)
LOCUS XM_068221700 7773 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X6, mRNA. ACCESSION XM_068221700 VERSION XM_068221700.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 2912..3169 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(3467..3481,3485..3487,3545..3547,3563..3565, 3602..3604,3608..3613,3620..3625,3629..3637) /gene="pknox1.2" /note="DNA binding site...
XM_068221700.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B6a (hoxb6a), mRNA. (687 bp)
LOCUS NM_131119 687 bp mRNA linear VRT 26-JAN-2025 DEFINITION Danio rerio homeobox B6a (hoxb6a), mRNA. ACCESSION NM_131119 VERSION NM_131119.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X17267.1. Publication Note: This RefSeq record includes a subset of the publications...
Synonym: hox-2.2; hox-B6; hoxb6; z-39; ZF-22; ZF22
NM_131119.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X1, mRNA. (5291 bp)
LOCUS XM_702776 5291 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X1, mRNA. ACCESSION XM_702776 VERSION XM_702776.8 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio...misc_feature 430..687 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(985..999,1003..1005,1063..1065,1081..1083, 1120..1122,1126..1131,1138..1143,1147..1155) /gene="pknox1.2" /note="DNA binding site...
XM_702776.8 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio homeobox protein TGIF2 (LOC100535338), mRNA. (4998 bp)
LOCUS XM_005168704 4998 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio homeobox protein TGIF2 (LOC100535338), mRNA. ACCESSION XM_005168704 VERSION XM_005168704.5 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa;...note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 343..450 /gene="LOC100535338" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" polyA_site 4998 /gene="LOC100535338" /experiment="COORDINATES: polyA evidence...
XM_005168704.5 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X5, mRNA. (5257 bp)
LOCUS XM_009294000 5257 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2 (pknox1.2), transcript variant X5, mRNA. ACCESSION XM_009294000 VERSION XM_009294000.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio...misc_feature 396..653 /gene="pknox1.2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(951..965,969..971,1029..1031,1047..1049,1086..1088, 1092..1097,1104..1109,1113..1121) /gene="pknox1.2" /note="DNA binding site...
XM_009294000.4 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox D12a (hoxd12a), mRNA. (1309 bp)
LOCUS NM_001126486 1309 bp mRNA linear VRT 07-DEC-2024 DEFINITION Danio rerio homeobox D12a (hoxd12a), mRNA. ACCESSION NM_001126486 XM_001340932 VERSION NM_001126486.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX322661.17. On Jul 31, 2008 this sequence version replaced...
Synonym: HOX-D12; hoxd-12; hoxd12
NM_001126486.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X7, mRNA. (3229 bp)
LOCUS XM_009293346 3229 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X7, mRNA. ACCESSION XM_009293346 VERSION XM_009293346.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 921..1175 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1434..1436,1563..1565,1572..1577,1584..1586) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293346.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X5, mRNA. (3250 bp)
LOCUS XM_009293344 3250 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X5, mRNA. ACCESSION XM_009293344 VERSION XM_009293344.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 921..1175 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1434..1436,1563..1565,1572..1577,1584..1586) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293344.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X2, mRNA. (2814 bp)
LOCUS XM_009293341 2814 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X2, mRNA. ACCESSION XM_009293341 VERSION XM_009293341.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 446..700 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(998..1000,1127..1129,1136..1141,1148..1150) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293341.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X4, mRNA. (3268 bp)
LOCUS XM_009293343 3268 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X4, mRNA. ACCESSION XM_009293343 VERSION XM_009293343.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 921..1175 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1473..1475,1602..1604,1611..1616,1623..1625) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293343.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X6, mRNA. (3232 bp)
LOCUS XM_009293345 3232 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X6, mRNA. ACCESSION XM_009293345 VERSION XM_009293345.3 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 921..1175 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1437..1439,1566..1568,1575..1580,1587..1589) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293345.3 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X3, mRNA. (3286 bp)
LOCUS XM_009293342 3286 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X3, mRNA. ACCESSION XM_009293342 VERSION XM_009293342.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 921..1175 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1470..1472,1599..1601,1608..1613,1620..1622) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293342.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X1, mRNA. (3289 bp)
LOCUS XM_009293340 3289 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 2a (meis2a), transcript variant X1, mRNA. ACCESSION XM_009293340 VERSION XM_009293340.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 921..1175 /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:fa26d08" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1473..1475,1602..1604,1611..1616,1623..1625) /gene="meis2a" /gene_synonym="fa26d08; meis2.2; wu:...
Synonym: fa26d08; meis2.2; wu:fa26d08
XM_009293340.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 1 a (meis1a), transcript variant X2, mRNA. (2196 bp)
LOCUS XM_005160125 2196 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 1 a (meis1a), transcript variant X2, mRNA. ACCESSION XM_005160125 VERSION XM_005160125.4 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 662..916 /gene="meis1a" /gene_synonym="meis4.1a; meis4.1b" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1154..1165,1169..1171,1229..1231,1247..1249, 1286..1288,1292..1297,1304..1309,1313..1321) /gene="meis1a" /...
Synonym: meis4.1a; meis4.1b
XM_005160125.4 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio Meis homeobox 1 a (meis1a), transcript variant X1, mRNA. (2092 bp)
LOCUS XM_005160124 2092 bp mRNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio Meis homeobox 1 a (meis1a), transcript variant X1, mRNA. ACCESSION XM_005160124 VERSION XM_005160124.5 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota...misc_feature 662..916 /gene="meis1a" /gene_synonym="meis4.1a; meis4.1b" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1154..1165,1169..1171,1229..1231,1247..1249, 1286..1288,1292..1297,1304..1309,1313..1321) /gene="meis1a" /...
Synonym: meis4.1a; meis4.1b
XM_005160124.5 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio visual system homeobox 2 (vsx2), mRNA. (1712 bp)
LOCUS NM_131462 1712 bp mRNA linear VRT 19-OCT-2024 DEFINITION Danio rerio visual system homeobox 2 (vsx2), mRNA. ACCESSION NM_131462 XM_001334034 VERSION NM_131462.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR628322.5. On or before Nov 30, 2007 this sequence version...
Synonym: alx; chx10; Vsx-2
NM_131462.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox A4a (hoxa4a), mRNA. (1366 bp)
LOCUS NM_131535 1366 bp mRNA linear VRT 07-DEC-2024 DEFINITION Danio rerio homeobox A4a (hoxa4a), mRNA. ACCESSION NM_131535 XM_680783 XM_703073 XM_703074 VERSION NM_131535.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122457.1. On or before Aug 28, 2006 this sequence...
Synonym: hoxx4; hoxzf26; im:6899783; ns:zf-es36; zf-es36
NM_131535.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox C6b (hoxc6b), transcript variant 1, mRNA. (1335 bp)
LOCUS NM_131530 1335 bp mRNA linear VRT 25-FEB-2025 DEFINITION Danio rerio homeobox C6b (hoxc6b), transcript variant 1, mRNA. ACCESSION NM_131530 VERSION NM_131530.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01085067.1. On Jun 8, 2016 this sequence version replaced...
Synonym: hoxy6
NM_131530.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio SIX homeobox 9 (six9), mRNA. (794 bp)
LOCUS NM_001130608 794 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio SIX homeobox 9 (six9), mRNA. ACCESSION NM_001130608 XM_684623 VERSION NM_001130608.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163024.1. On May 28, 2009 this sequence version replaced XM...
Synonym: si:dkey-149j18.3
NM_001130608.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio homeobox B1a (hoxb1a), mRNA. (1069 bp)
LOCUS NM_131115 1069 bp mRNA linear VRT 07-DEC-2024 DEFINITION Danio rerio homeobox B1a (hoxb1a), mRNA. ACCESSION NM_131115 VERSION NM_131115.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC162942.1. On Jun 9, 2015 this sequence version replaced NM_131115.1. Publication...
Synonym: hoxb1; id:ibd3532; sb:eu402; Z-3
NM_131115.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio LIM homeobox 5 (lhx5), mRNA. (2016 bp)
LOCUS NM_131218 2016 bp mRNA linear VRT 24-NOV-2024 DEFINITION Danio rerio LIM homeobox 5 (lhx5), mRNA. ACCESSION NM_131218 VERSION NM_131218.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from L42547.1. Publication Note: This RefSeq record includes a subset of the publications...
Synonym: lim5
NM_131218.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio engrailed homeobox 2b (en2b), mRNA. (1823 bp)
LOCUS NM_131040 1823 bp mRNA linear VRT 26-JAN-2025 DEFINITION Danio rerio engrailed homeobox 2b (en2b), mRNA. ACCESSION NM_131040 VERSION NM_131040.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X68447.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: en3; ENG-3; eng2b; eng3; ZF-EN-1
NM_131040.1 - Danio rerio (zebrafish) - NCBI - UCSC

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Redirect URI : https://ggrna.dbcls.jp/dr/homeobox
lang : en | div : | spe : dr | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.081 | 0.081 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=0&format=json
0.127 | 0.047 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.133 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]