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2025-01-31 06:45:43, GGRNA : RefSeq release 227 (Nov, 2024)
Summary:
Results:
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iroquois homeobox protein 7" /codon_start=1 /product="iroquois homeobox 7" /protein_id="NP_571956.1" /db_xref="GeneID:140746" /db_xref="ZFIN:ZDB-GENE-020103-1" /translation="MPASSTGFANFFMDRNINMPAGYQLLGCPPGMQQPPPHLVGMAGMPLPFSGIPGYSFIPYPHPGHMAHISNSYDLKAASPYHQALLGRGGPYYTPYRPIPADDPSRVTKVATRESTSALKAWLSEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRVSWASKGKSDEEDEEEEGESEEEGSLRKGTEDEDEIDPQTVDDEDEEDVVVSKSVEHRLAGGLEQQKESDKSDTLTKRESYKQIADVQKPKIWSLAETATSDIVKKPSDLKHLQTSPDFGQWWAGWPSRDSYSPVNLSTHDLLKQSQ" misc_feature 391..507 /gene="irx7" /gene_synonym="cb263; iro7; zgc:109841; ziro7" /note="Homeobox KN domain;...
Synonym: cb263; iro7; zgc:109841; ziro7
NM_131881.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131589 1175 bp mRNA linear VRT 20-FEB-2022 DEFINITION Danio rerio NK2 homeobox 4b (nkx2.4b), mRNA. ACCESSION NM_131589 VERSION NM_131589.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF253054.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: nk2.1a; nkx2.1; nkx2.1a; nkx2.4a; titf1; titf1a
NM_131589.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_198813 3252 bp mRNA linear VRT 02-OCT-2022 DEFINITION Danio rerio zinc fingers and homeoboxes 3b (zhx3b), mRNA. ACCESSION NM_198813 VERSION NM_198813.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY311506.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: tix1; zgc:110489; zhx3
NM_198813.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001254944 1601 bp mRNA linear VRT 26-DEC-2022 DEFINITION Danio rerio homeobox C10a (hoxc10a), mRNA. ACCESSION NM_001254944 XM_003201219 VERSION NM_001254944.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX005254.9. On Dec 18, 2011 this sequence version replaced XM...
Synonym: hoxc10; z-81
NM_001254944.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001001405 1231 bp mRNA linear VRT 04-DEC-2022 DEFINITION Danio rerio iroquois homeobox 5b (irx5b), mRNA. ACCESSION NM_001001405 VERSION NM_001001405.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 407..523 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 836..889 /gene="irx5b" /gene_synonym="iro5b; ziro5b" /note="Motif in...
Synonym: iro5b; ziro5b
NM_001001405.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001037105 864 bp mRNA linear VRT 09-JUL-2023 DEFINITION Danio rerio dorsal root ganglia homeobox (drgx), mRNA. ACCESSION NM_001037105 XM_683802 VERSION NM_001037105.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY753211.1. On Nov 6, 2005 this sequence version...
Synonym: prrxl1
NM_001037105.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_0066 1639 bp mRNA linear VRT 08-OCT-2023 DEFINITION Danio rerio NK2 homeobox 4a (nkx2.4a), transcript variant 1, mRNA. ACCESSION NM_0066 XM_679993 XM_702667 XM_702669 VERSION NM_0066.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC153953.1. On or before Dec...
Synonym: fi48a12; wu:fi48a12; zgc:171531
NM_001111166.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001310078 1719 bp mRNA linear VRT 23-SEP-2023 DEFINITION Danio rerio ALX homeobox 4b (alx4b), mRNA. ACCESSION NM_001310078 VERSION NM_001310078.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU929116.4, EH456049.1, CU929277.10 and EH481782.1. Sequence Note: This...
Synonym: im:7142878; si:ch73-220n21.1; zgc:162606
NM_001310078.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_212807 1493 bp mRNA linear VRT 16-APR-2022 DEFINITION Danio rerio POU class 4 homeobox 2 (pou4f2), mRNA. ACCESSION NM_212807 VERSION NM_212807.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY196176.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: brn-3b; brn3.2
NM_212807.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131289 2712 bp mRNA linear VRT 15-MAY-2023 DEFINITION Danio rerio POU class 3 homeobox 2a (pou3f2a), mRNA. ACCESSION NM_131289 VERSION NM_131289.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC129152.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: brn-1.2; brn1.2; id:ibd5088
NM_131289.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_178302 867 bp mRNA linear VRT 04-FEB-2024 DEFINITION Danio rerio posterior neuron-specific homeobox (pnx), mRNA. ACCESSION NM_178302 VERSION NM_178302.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB067731.1. On Jun 3, 2003 this sequence version replaced NM...
NM_178302.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131538 987 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox B6b (hoxb6b), mRNA. ACCESSION NM_131538 XM_001335154 VERSION NM_131538.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC162890.1. On May 8, 2009 this sequence version replaced XM...
Synonym: hoxa7; z-5
NM_131538.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001045371 1446 bp mRNA linear VRT 08-JUN-2024 DEFINITION Danio rerio H6 family homeobox 4 (hmx4), mRNA. ACCESSION NM_001045371 VERSION NM_001045371.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122454.1. Publication Note: This RefSeq record includes a subset of...
Synonym: Hmx1; soho; wu:fc21b03; zgc:154104
NM_001045371.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001320052 4523 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio SEBOX homeobox (sebox), mRNA. ACCESSION NM_001320052 VERSION NM_001320052.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX957226.10. Sequence Note: The RefSeq transcript and protein were derived...
Synonym: og9x
NM_001320052.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131530 1335 bp mRNA linear VRT 04-APR-2024 DEFINITION Danio rerio homeobox C6b (hoxc6b), transcript variant 1, mRNA. ACCESSION NM_131530 VERSION NM_131530.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01085067.1. On Jun 8, 2016 this sequence version replaced...
Synonym: hoxy6
NM_131530.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001126486 1309 bp mRNA linear VRT 04-APR-2024 DEFINITION Danio rerio homeobox D12a (hoxd12a), mRNA. ACCESSION NM_001126486 XM_001340932 VERSION NM_001126486.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX322661.17. On Jul 31, 2008 this sequence version replaced...
Synonym: HOX-D12; hoxd-12; hoxd12
NM_001126486.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001012251 1401 bp mRNA linear VRT 07-MAY-2024 DEFINITION Danio rerio GS homeobox 1 (gsx1), mRNA. ACCESSION NM_001012251 VERSION NM_001012251.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY486348.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: gsh1; im:7138106; zgc:110817
NM_001012251.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_207185 1707 bp mRNA linear VRT 24-APR-2024 DEFINITION Danio rerio iroquois homeobox 1a (irx1a), transcript variant 2, mRNA. ACCESSION NM_207185 VERSION NM_207185.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata;...misc_feature 603..719 /gene="irx1a" /gene_synonym="irx1; zgc:109702; zgc:136490; ziro1; ziro1a" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature <1032..1073 /gene="irx1a" /gene_synonym="irx1; zgc:109702; zgc:136490; ziro1; ziro1a" /note="Motif in Iroquois...
Synonym: irx1; zgc:109702; zgc:136490; ziro1; ziro1a
NM_207185.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131178 1429 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio developing brain homeobox 1b (dbx1b), mRNA. ACCESSION NM_131178 VERSION NM_131178.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF030285.1. Publication Note: This RefSeq record includes a subset of...
Synonym: hlx2; sb:eu236
NM_131178.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001328159 1425 bp mRNA linear VRT 04-APR-2024 DEFINITION Danio rerio homeobox C6b (hoxc6b), transcript variant 2, mRNA. ACCESSION NM_001328159 VERSION NM_001328159.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01085067.1. Transcript Variant: This variant (2)...
Synonym: hoxy6
NM_001328159.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131166 1644 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox D10a (hoxd10a), mRNA. ACCESSION NM_131166 VERSION NM_131166.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CK864624.1, BC071329.1 and CT704711.2. On Jun 16, 2010 this sequence version...
Synonym: HOX-D10; hoxd-10; hoxd10; z-82
NM_131166.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131122 1500 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox C4a (hoxc4a), mRNA. ACCESSION NM_131122 VERSION NM_131122.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092923.1. On May 1, 2005 this sequence version replaced NM_131122.1. Publication...
Synonym: hoxc4; z-96; zgc:110513
NM_131122.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131528 1405 bp mRNA linear VRT 04-APR-2024 DEFINITION Danio rerio homeobox C9a (hoxc9a), mRNA. ACCESSION NM_131528 VERSION NM_131528.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX005254.9 and EH591454.1. On May 15, 2015 this sequence version replaced NM...
Synonym: BZ-39; bz39; hoxc9; zgc:109844
NM_131528.3 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001085494 1703 bp mRNA linear VRT 01-JUN-2024 DEFINITION Danio rerio homeobox A13a (hoxa13a), mRNA. ACCESSION NM_001085494 XM_693696 VERSION NM_001085494.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC133882.1. On May 23, 2007 this sequence version replaced XM...
Synonym: hoxa13
NM_001085494.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001045227 1922 bp mRNA linear VRT 02-APR-2024 DEFINITION Danio rerio iroquois homeobox 5a (irx5a), mRNA. ACCESSION NM_001045227 NM_131824 XM_681897 XM_703534 XM_703535 XM_703536 VERSION NM_001045227.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 671..787 /gene="irx5a" /gene_synonym="iro5" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 806..1219 /gene="irx5a" /gene_synonym="iro5" /note="propagated from...
Synonym: iro5
NM_001045227.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131533 777 bp mRNA linear VRT 17-MAR-2024 DEFINITION Danio rerio homeobox A9b (hoxa9b), mRNA. ACCESSION NM_131533 VERSION NM_131533.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF071249.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: Hoxa-9; zgc:110504
NM_131533.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131147 852 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox A11b (hoxa11b), mRNA. ACCESSION NM_131147 VERSION NM_131147.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF287137.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: Hoxa-11; hoxa11; im:7142641
NM_131147.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001126445 1247 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox D4a (hoxd4a), mRNA. ACCESSION NM_001126445 NM_130757 VERSION NM_001126445.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162966.1. On or before May 16, 2009 this sequence version...
Synonym: etID309823.9; etID37000.9; fb36c05; hoxd4; wu:fb36c05
NM_001126445.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001005771 2320 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox C8a (hoxc8a), mRNA. ACCESSION NM_001005771 VERSION NM_001005771.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC080255.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: cb341; hoxc8; z-179; zgc:91832
NM_001005771.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131544 948 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox A11a (hoxa11a), mRNA. ACCESSION NM_131544 VERSION NM_131544.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF071240.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: sb:eu415
NM_131544.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131106 1797 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox A2b (hoxa2b), mRNA. ACCESSION NM_131106 VERSION NM_131106.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF307010.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: hoxa2; Z-75
NM_131106.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131169 1196 bp mRNA linear VRT 01-JUN-2024 DEFINITION Danio rerio homeobox D13a (hoxd13a), mRNA. ACCESSION NM_131169 VERSION NM_131169.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091996.1. On Aug 30, 2012 this sequence version replaced NM_131169.2....
Synonym: hoxd-13; hoxd13; zgc:110511
NM_131169.3 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001134685 1943 bp mRNA linear VRT 04-APR-2024 DEFINITION Danio rerio homeobox C3a (hoxc3a), mRNA. ACCESSION NM_001134685 NM_131182 XM_001923793 XM_001923794 VERSION NM_001134685.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX005254.9. On or before May 14, 2009...
Synonym: HOX-114; zgc:110503
NM_001134685.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131545 852 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox C12b (hoxc12b), mRNA. ACCESSION NM_131545 VERSION NM_131545.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF071260.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: sb:eu246
NM_131545.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001115091 1256 bp mRNA linear VRT 17-MAR-2024 DEFINITION Danio rerio homeobox B7a (hoxb7a), mRNA. ACCESSION NM_001115091 XM_683101 VERSION NM_001115091.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC163361.1 and BX927395.19. On Mar 5, 2014 this sequence version...
Synonym: fc39g02; hoxb7; wu:fc39g02; z-139
NM_001115091.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131194 1542 bp mRNA linear VRT 01-JUN-2024 DEFINITION Danio rerio homeobox A13b (hoxa13b), mRNA. ACCESSION NM_131194 XM_005157955 VERSION NM_131194.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC090761.1. On or before Jun 18, 2015 this sequence version replaced...
Synonym: Hoxa-13; HOXA13; wu:fa66g07; zgc:110514
NM_131194.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131155 1760 bp mRNA linear VRT 05-MAY-2024 DEFINITION Danio rerio homeobox A10b (hoxa10b), mRNA. ACCESSION NM_131155 VERSION NM_131155.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR392024.15. On Apr 17, 2018 this sequence version replaced NM_131155.1. Sequence...
Synonym: Hoxa-10; hoxa10; z-140
NM_131155.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001009885 1486 bp mRNA linear VRT 07-APR-2024 DEFINITION Danio rerio motor neuron and pancreas homeobox 1 (mnx1), mRNA. ACCESSION NM_001009885 VERSION NM_001009885.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093243.1. On Apr 20, 2005 this sequence version...
Synonym: hlxb9; zgc:112174
NM_001009885.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131165 1540 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox C11a (hoxc11a), mRNA. ACCESSION NM_131165 VERSION NM_131165.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091858.1. On Aug 31, 2012 this sequence version replaced NM_131165.1....
Synonym: hoxc11; id:ibd3176; zgc:110834
NM_131165.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001110759 926 bp mRNA linear VRT 01-JUN-2024 DEFINITION Danio rerio homeobox C12a (hoxc12a), mRNA. ACCESSION NM_001110759 XM_685980 VERSION NM_001110759.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162849.1. On Sep 9, 2008 this sequence version replaced XM...
Synonym: si:dkey-81p22.1
NM_001110759.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131541 2134 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio homeobox B10a (hoxb10a), mRNA. ACCESSION NM_131541 XM_001336281 VERSION NM_131541.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX927395.19. On Mar 22, 2009 this sequence version replaced XM...
Synonym: hoxb10; im:7139959; wu:fc25g03; z-122
NM_131541.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001044912 1181 bp mRNA linear VRT 01-JUN-2024 DEFINITION Danio rerio homeobox B13a (hoxb13a), mRNA. ACCESSION NM_001044912 XM_683317 VERSION NM_001044912.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117625.1. On Sep 1, 2006 this sequence version replaced XM...
Synonym: zgc:136601
NM_001044912.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131543 1175 bp mRNA linear VRT 01-JUN-2024 DEFINITION Danio rerio homeobox C13a (hoxc13a), mRNA. ACCESSION NM_131543 VERSION NM_131543.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY452737.1. Publication Note: This RefSeq record includes a subset of the...
NM_131543.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131278 996 bp mRNA linear VRT 03-APR-2024 DEFINITION Danio rerio POU class 4 homeobox 3 (pou4f3), mRNA. ACCESSION NM_131278 VERSION NM_131278.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY995217.1. Publication Note: This RefSeq record includes a subset of the...
Synonym: BRN-3.1; brn-3c; brn3.1; brn3c
NM_131278.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001007134 1764 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio ladybird homeobox 2 (lbx2), mRNA. ACCESSION NM_001007134 VERSION NM_001007134.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075912.1. Publication Note: This RefSeq record includes a subset of...
Synonym: fc26c12;
homeobox; lbx; lbx1; lbx1h; SI:zC207O21.2; wu:fc26c12; zgc:92170
NM_001007134.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131232 3334 bp mRNA linear VRT 04-DEC-2023 DEFINITION Danio rerio even-skipped homeobox 2 (evx2), mRNA. ACCESSION NM_131232 VERSION NM_131232.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057443.1. On Jan 25, 2004 this sequence version replaced NM_131232.1....
Synonym: Evx-2
NM_131232.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_131272 2029 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio muscle segment homeobox 3 (msx3), mRNA. ACCESSION NM_131272 VERSION NM_131272.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL831745.3, EH593082.1, DT069743.1 and EH607545.1. On Aug 18, 2015 this...
Synonym:
homeobox; msh-C; mshC; msx-c; msxc; zgc:86596
NM_131272.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001009886 999 bp mRNA linear VRT 13-MAR-2024 DEFINITION Danio rerio motor neuron and pancreas homeobox 2a (mnx2a), mRNA. ACCESSION NM_001009886 XM_002663318 XM_002663319 VERSION NM_001009886.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU693367.4. On or before...
Synonym: hlxb9la; mnr2a
NM_001009886.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001128703 1064 bp mRNA linear VRT 19-MAY-2024 DEFINITION Danio rerio orthopedia homeobox a (otpa), mRNA. ACCESSION NM_001128703 XM_678094 XM_701814 VERSION NM_001128703.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162329.1. On or before Jul 31, 2008 this...
NM_001128703.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LOCUS NM_001122973 1176 bp mRNA linear VRT 15-APR-2024 DEFINITION Danio rerio LIM homeobox 4 (lhx4), mRNA. ACCESSION NM_001122973 XM_695590 VERSION NM_001122973.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;...Status: Online-Only REFERENCE 2 (bases 1 to 1176) AUTHORS Guo,R., Ge,K., Wang,Y., Lu,M., Li,F., Tian,L., Gan,L. and Sheng,D. TITLE LIM Homeobox 4 (lhx4) regulates retinal neural differentiation and visual function in zebrafish JOURNAL Sci Rep 11 (1), 1977 (2021) PUBMED 33479361 REMARK GeneRIF: LIM...
Synonym: si:dkeyp-35f11.3
NM_001122973.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
Data Export:
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Redirect URI : http://ggrna.dbcls.jp/ja/dr/homeobox
lang : ja |
div : |
spe : dr |
query_string : homeobox |
format : html |
download :
0.000 | 0.000 | search_start;
0.077 | 0.077 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=0&format=json
0.149 | 0.071 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Danio rerio (zebrafish)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.154 | 0.005 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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