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2024-04-20 06:31:49, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

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PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. (3345 bp)
LOCUS XR_005850607 3345 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. ACCESSION XR_005850607 VERSION XR_005850607.2 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is...
XR_005850607.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. (3345 bp)
LOCUS XR_003075334 3345 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. ACCESSION XR_003075334 VERSION XR_003075334.3 DBLINK BioProject: PRJNA698609 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is...
XR_003075334.3 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, mRNA. (4143 bp)
LOCUS XM_421314 4143 bp mRNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, mRNA. ACCESSION XM_421314 VERSION XM_421314.8 DBLINK BioProject: PRJNA698609 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by...
XM_421314.8 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, mRNA. (4144 bp)
LOCUS XM_040672987 4144 bp mRNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, mRNA. ACCESSION XM_040672987 VERSION XM_040672987.2 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is...
XM_040672987.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X1, mRNA. (4147 bp)
LOCUS XM_040672986 4147 bp mRNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X1, mRNA. ACCESSION XM_040672986 VERSION XM_040672986.2 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is...
XM_040672986.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X1, mRNA. (4146 bp)
LOCUS XM_015287744 4146 bp mRNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X1, mRNA. ACCESSION XM_015287744 VERSION XM_015287744.4 DBLINK BioProject: PRJNA698609 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is...
XM_015287744.4 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus aquaporin 1 (AQP1), mRNA. (2558 bp)
the InterPro approach to GO curation JOURNAL Database (Oxford) 2012, bar068 (2012) PUBMED 22301074 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2558) AUTHORS Camerino GM, Nicchia GP, Dinardo MM, Ribatti D, Svelto M and Frigeri A. TITLE In vivo silencing of aquaporin-1 by RNA interference inhibits angiogenesis in the chick embryo chorioallantoic membrane assay JOURNAL Cell Mol Biol (Noisy-le-grand) 52 (7), 51-56 (2006) PUBMED 17543222 REMARK GeneRIF: AQP1 could have a key role in physiological and pathological angiogenesis. Publication Status: Online-Only...
NM_001039453.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 25, mRNA. (3296 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400507.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 26, mRNA. (3288 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400508.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 24, mRNA. (3574 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400506.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 21, mRNA. (3418 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400502.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 20, mRNA. (3981 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400499.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 22, mRNA. (3472 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400503.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 23, mRNA. (3410 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400505.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 18, mRNA. (4312 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400497.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 19, mRNA. (4333 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400498.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus protocadherin alpha 5 (PCDHA5), mRNA. (3003 bp)
PUBMED 22301074 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3003) AUTHORS Han MH, Lin C, Meng S and Wang X. TITLE Proteomics analysis reveals overlapping functions of clustered protocadherins JOURNAL Mol Cell Proteomics 9 (1), 71-83 (2010) PUBMED 19843561 REMARK GeneRIF: RNA interference knockdown of both PCDH-alphas and PCDH-gamma s showed that PCDHs have redundant functions in regulating neuronal survival in the chicken spinal cord. REFERENCE 3 (bases 1 to 3003) AUTHORS Sugino H, Yanase H, Hamada S, Kurokawa K, Asakawa S, Shimizu N and Yagi T. TITLE Distinct genomic...
Synonym: CNRv5
NM_001111135.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 12, mRNA. (4322 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400489.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 14, mRNA. (4508 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400492.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus protocadherin gamma subfamily C, 5 (PCDHGC5), mRNA. (4934 bp)
PUBMED 22301074 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4934) AUTHORS Han MH, Lin C, Meng S and Wang X. TITLE Proteomics analysis reveals overlapping functions of clustered protocadherins JOURNAL Mol Cell Proteomics 9 (1), 71-83 (2010) PUBMED 19843561 REMARK GeneRIF: RNA interference knockdown of both PCDH-alphas and PCDH-gamma showed that PCDHs have redundant functions in regulating neuronal survival in the spinal cord. REFERENCE 3 (bases 1 to 4934) AUTHORS Cronin KD and Capehart AA. TITLE Gamma protocadherin expression in the embryonic chick nervous system JOURNAL Int...
NM_001396448.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 15, mRNA. (4379 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400493.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 13, mRNA. (4354 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400491.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 17, mRNA. (4375 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400495.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 16, mRNA. (4531 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400494.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 10, mRNA. (4455 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400486.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 11, mRNA. (4459 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400488.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 9, mRNA. (4494 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400485.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 5, mRNA. (4501 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400478.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 3, mRNA. (4444 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400476.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 1, mRNA. (4497 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001396810.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 8, mRNA. (4476 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400483.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 7, mRNA. (4653 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400482.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 4, mRNA. (4630 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400477.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 2, mRNA. (4559 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_204147.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus matrin 3 (MATR3), transcript variant 6, mRNA. (4774 bp)
M, Kobayashi N and Kitagawa Y. TITLE Bipartite nuclear localization signal of matrin 3 is essential for vertebrate cells JOURNAL Biochem Biophys Res Commun 354 (1), 72-76 (2007) PUBMED 17223080 REMARK GeneRIF: Exogenous cmatr3 rescued the HeLa cells where human matrin 3 was suppressed by RNA interference, but cmatr3 containing deletions at either of the basic amino acid clusters or the linker could not....
Synonym: matrin-3
NM_001400480.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 2, RISC catalytic component (AGO2), mRNA. (12501 bp)
gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 795..1157 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(951..953,996..998,1038..1040,1050..1052,1104..1106, 1125..1127,1131..1133) /gene="AGO2" /note="nucleic acid-binding interface [...
NM_001389549.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 1, RISC catalytic component (AGO1), mRNA. (6707 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 793..1155 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(949..951,994..996,1036..1038,1048..1050,1102..1104, 1123..1125,1129..1131) /gene="AGO1" /gene_synonym="EIF2C1" /note="nucleic acid-...
Synonym: EIF2C1
NM_001317212.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 4, RISC catalytic component (AGO4), transcript variant 1, mRNA. (3461 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 682..1044 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(838..840,883..885,925..927,937..939,991..993, 1012..1014,1018..1020) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-binding...
Synonym: EIF2C4
NM_001396480.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 4, RISC catalytic component (AGO4), transcript variant 2, mRNA. (3579 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 800..1162 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(956..958,1001..1003,1043..1045,1055..1057, 1109..1111,1130..1132,1136..1138) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-...
Synonym: EIF2C4
NM_001039276.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 4, RISC catalytic component (AGO4), transcript variant 3, mRNA. (3659 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 880..1242 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1036..1038,1081..1083,1123..1125,1135..1137, 1189..1191,1210..1212,1216..1218) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-...
Synonym: EIF2C4
NM_001396481.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus argonaute 2, RISC catalytic component (AGO2), transcript variant X1, mRNA. (14192 bp)
gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 709..1071 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(865..867,910..912,952..954,964..966,1018..1020, 1039..1041,1045..1047) /gene="AGO2" /note="nucleic acid-binding interface [...
XM_046910120.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus argonaute 2, RISC catalytic component (AGO2), transcript variant X1, mRNA. (14184 bp)
gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 709..1071 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(865..867,910..912,952..954,964..966,1018..1020, 1039..1041,1045..1047) /gene="AGO2" /note="nucleic acid-binding interface [...
XM_040673464.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus argonaute 1, RISC catalytic component (AGO1), transcript variant X1, mRNA. (6715 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 798..1160 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(954..956,999..1001,1041..1043,1053..1055,1107..1109, 1128..1130,1134..1136) /gene="AGO1" /gene_synonym="EIF2C1" /note="nucleic acid-...
Synonym: EIF2C1
XM_046932028.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus argonaute 1, RISC catalytic component (AGO1), transcript variant X1, mRNA. (6712 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 798..1160 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(954..956,999..1001,1041..1043,1053..1055,1107..1109, 1128..1130,1134..1136) /gene="AGO1" /gene_synonym="EIF2C1" /note="nucleic acid-...
Synonym: EIF2C1
XM_015297696.4 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus ectonucleotide pyrophosphatase/phosphodiesterase 2 (ENPP2), mRNA. (3250 bp)
Only REFERENCE 3 (bases 1 to 3250) AUTHORS Ohuchi H, Fukui H, Matsuyo A, Tomonari S, Tanaka M, Arai H, Noji S and Aoki J. TITLE Autotaxin controls caudal diencephalon-mesencephalon development in the chick JOURNAL Dev Dyn 239 (10), 2647-2658 (2010) PUBMED 20737506 REMARK GeneRIF: ATX RNA interference altered the expression pattern of Pax6-regualted genes, Tcf4, Lim1, and En1, implying that ATX is required for the maintenance of the regional identity of the caudal diencephalon and the diencephalon-mesencephalon boundary (DMB). REFERENCE 4 (bases 1 to 3250) AUTHORS Ahanda ML, Ruby T, Wittzell H...
NM_001198662.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus peroxisome proliferator-activated receptor gamma (PPARG), transcript variant 2, mRNA. (4501 bp)
proliferator-activated receptor-gamma gene: a key regulator of adipocyte differentiation in chickens JOURNAL Poult Sci 87 (2), 226-232 (2008) PUBMED 18212364 REMARK GeneRIF: This was designed to investigate the function and regulatory mechanism of PPARgamma in chicken adipogenesis by RNA interference. REFERENCE 9 (bases 1 to 4501) AUTHORS Sato K, Fukao K, Seki Y and Akiba Y. TITLE Expression of the chicken peroxisome proliferator-activated receptor-gamma gene is influenced by aging, nutrition, and agonist administration JOURNAL Poult Sci 83 (8), 1342-1347 (2004) PUBMED 15339009 REMARK GeneRIF...
Synonym: PPARgamma; PPARgamma2
NM_001397666.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus peroxisome proliferator-activated receptor gamma (PPARG), transcript variant 1, mRNA. (4472 bp)
proliferator-activated receptor-gamma gene: a key regulator of adipocyte differentiation in chickens JOURNAL Poult Sci 87 (2), 226-232 (2008) PUBMED 18212364 REMARK GeneRIF: This was designed to investigate the function and regulatory mechanism of PPARgamma in chicken adipogenesis by RNA interference. REFERENCE 9 (bases 1 to 4472) AUTHORS Sato K, Fukao K, Seki Y and Akiba Y. TITLE Expression of the chicken peroxisome proliferator-activated receptor-gamma gene is influenced by aging, nutrition, and agonist administration JOURNAL Poult Sci 83 (8), 1342-1347 (2004) PUBMED 15339009 REMARK GeneRIF...
Synonym: PPARgamma; PPARgamma2
NM_001001460.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus dicer 1, ribonuclease III (DICER1), transcript variant X2, mRNA. (10772 bp)
gene="DICER1" /gene_synonym="dicer" /note="Dicer dimerization domain; Region: Dicer_dimer; pfam03368" /db_xref="CDD:427264" misc_feature 3054..3422 /gene="DICER1" /gene_synonym="dicer" /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse involved in cleaving dsRNA in the RNA interference pathway. It generates dsRNAs which are approximately 20 bp long (siRNAs), which in turn target hydrolysis of homologous RNAs. PAZ domains are named...; Region: PAZ_dicer_like; cd02843" /db_xref="CDD:239209" misc_feature order...
Synonym: dicer
XM_046918635.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus dicer 1, ribonuclease III (DICER1), transcript variant X2, mRNA. (10773 bp)
gene="DICER1" /gene_synonym="dicer" /note="Dicer dimerization domain; Region: Dicer_dimer; pfam03368" /db_xref="CDD:427264" misc_feature 3054..3422 /gene="DICER1" /gene_synonym="dicer" /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse involved in cleaving dsRNA in the RNA interference pathway. It generates dsRNAs which are approximately 20 bp long (siRNAs), which in turn target hydrolysis of homologous RNAs. PAZ domains are named...; Region: PAZ_dicer_like; cd02843" /db_xref="CDD:239209" misc_feature order...
Synonym: dicer
XM_046941796.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus dicer 1, ribonuclease III (DICER1), transcript variant X5, mRNA. (10636 bp)
gene="DICER1" /gene_synonym="dicer" /note="Dicer dimerization domain; Region: Dicer_dimer; pfam03368" /db_xref="CDD:427264" misc_feature 2918..3286 /gene="DICER1" /gene_synonym="dicer" /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse involved in cleaving dsRNA in the RNA interference pathway. It generates dsRNAs which are approximately 20 bp long (siRNAs), which in turn target hydrolysis of homologous RNAs. PAZ domains are named...; Region: PAZ_dicer_like; cd02843" /db_xref="CDD:239209" misc_feature order...
Synonym: dicer
XM_046918638.1 - Gallus gallus (chicken) - NCBI - UCSC

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Redirect URI : http://ggrna.dbcls.jp/gg/%22RNA+interference%22
lang : en | div : | spe : gg | query_string : "RNA interference" | format : html | download : 

0.000 | 0.000 | search_start;
0.080 | 0.080 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Gallus gallus (chicken)?to=0&format=json
0.178 | 0.097 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Gallus gallus (chicken)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.183 | 0.005 | cgi_end;

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]