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2026-01-17 19:33:12, GGRNA : RefSeq release 232 (Sep, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Gallus gallus argonaute 4, RISC catalytic component (AGO4), transcript variant 1, mRNA. (3461 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 682..1044 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(838..840,883..885,925..927,937..939,991..993, 1012..1014,1018..1020) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-binding...
Synonym: EIF2C4
NM_001396480.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 4, RISC catalytic component (AGO4), transcript variant 2, mRNA. (3579 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 800..1162 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(956..958,1001..1003,1043..1045,1055..1057, 1109..1111,1130..1132,1136..1138) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-...
Synonym: EIF2C4
NM_001039276.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus argonaute 4, RISC catalytic component (AGO4), transcript variant 3, mRNA. (3659 bp)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 880..1242 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1036..1038,1081..1083,1123..1125,1135..1137, 1189..1191,1210..1212,1216..1218) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-...
Synonym: EIF2C4
NM_001396481.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus dicer 1, ribonuclease III (DICER1), mRNA. (6483 bp)
gene_synonym="dicer" /note="propagated from UniProtKB/Swiss-Prot (Q25BN1.3); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 3029..3397 /gene="DICER1" /gene_synonym="dicer" /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse involved in cleaving dsRNA in the RNA interference pathway. It generates dsRNAs which are approximately 20 bp long (siRNAs), which in turn target hydrolysis of homologous RNAs. PAZ domains are named...; Region: PAZ_dicer_like; cd02843" /db_xref="CDD:239209" misc_feature order...
Synonym: dicer
NM_001040465.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus ectonucleotide pyrophosphatase/phosphodiesterase 2 (ENPP2), mRNA. (3250 bp)
REFERENCE 3 (bases 1 to 3250) AUTHORS Ohuchi,H., Fukui,H., Matsuyo,A., Tomonari,S., Tanaka,M., Arai,H., Noji,S. and Aoki,J. TITLE Autotaxin controls caudal diencephalon-mesencephalon development in the chick JOURNAL Dev Dyn 239 (10), 2647-2658 (2010) PUBMED 20737506 REMARK GeneRIF: ATX RNA interference altered the expression pattern of Pax6-regualted genes, Tcf4, Lim1, and En1, implying that ATX is required for the maintenance of the regional identity of the caudal diencephalon and the diencephalon-mesencephalon boundary (DMB). REFERENCE 4 (bases 1 to 3250) AUTHORS Ahanda,M.L., Ruby,T.,...
NM_001198662.2 - Gallus gallus (chicken) - NCBI - UCSC

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : https://ggrna.dbcls.jp/gg/%22RNA+interference%22
lang : en | div : | spe : gg | query_string : "RNA interference" | format : html | download : 

0.000 | 0.000 | search_start;
0.086 | 0.086 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Gallus gallus (chicken)?to=0&format=json
0.116 | 0.030 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Gallus gallus (chicken)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.117 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]