GGRNA | Results

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Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_15273), partial mRNA. (2346 bp)

LOCUS XM_062931429 2346 bp mRNA linear PLN 07-FEB-2024 DEFINITION Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_15273), partial mRNA. ACCESSION XM_062931429 VERSION XM_062931429.1 DBLINK BioProject: PRJNA1073607 BioSample: SAMN37882108 KEYWORDS RefSeq. SOURCE Colletotrichum destructivum ORGANISM Colletotrichum destructivum Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex. REFERENCE...

XM_062931429.1 - Colletotrichum destructivum - NCBI

Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_03520), partial mRNA. (2979 bp)

LOCUS XM_062919679 2979 bp mRNA linear PLN 07-FEB-2024 DEFINITION Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_03520), partial mRNA. ACCESSION XM_062919679 VERSION XM_062919679.1 DBLINK BioProject: PRJNA1073607 BioSample: SAMN37882108 KEYWORDS RefSeq. SOURCE Colletotrichum destructivum ORGANISM Colletotrichum destructivum Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex. REFERENCE...

XM_062919679.1 - Colletotrichum destructivum - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)

LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This...

XM_024651321.1 - Strongyloides ratti - NCBI

Caenorhabditis elegans PAZ domain-containing protein (wago-10), mRNA. (3217 bp)

misc_feature 1097..1375 /gene="wago-10" /locus_tag="CELE_T22H9.3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1178..1180,1223..1225,1256..1258,1268..1270, 1322..1324,1343..1345,1349..1351) /gene="wago-10" /locus_tag="CELE_T22H9.3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /...

NM_070776.5 - Caenorhabditis elegans - NCBI - UCSC - WormBase

Apiospora aurea protein argonaute (PG986_000207), partial mRNA. (3018 bp)

mol_type="mRNA" /strain="CBS 24483" /culture_collection="CBS:24483" /db_xref="taxon:335848" /chromosome="Unknown" gene 3018 /locus_tag="PG986_000207" /db_xref="GeneID:92069491" CDS 1..3018 /locus_tag="PG986_000207" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; consensus disorder prediction; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; PAZ domain profile.; PAZ_argonaute_like; Piwi domain; Piwi domain profile." /codon_start=1 /product="protein argonaute" /protein_id="XP_066705322.1" /db_xref="GeneID:92069491" /translation="...

XM_066836429.1 - Apiospora aurea - NCBI

Apiospora hydei protein argonaute (PG997_013705), partial mRNA. (3150 bp)

type_material="culture from type material of Arthrinium hydei" /db_xref="taxon:1337664" /chromosome="Unknown" gene 3150 /locus_tag="PG997_013705" /db_xref="GeneID:92051079" CDS <1..3150 /locus_tag="PG997_013705" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; consensus disorder prediction; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; PAZ domain profile.; PAZ_argonaute_like; Piwi domain; Piwi domain profile.; Piwi_ago-like" /codon_start=1 /product="protein argonaute" /protein_id="XP_066663711.1" /db_xref="GeneID:92051079" /translation="...

XM_066818019.1 - Apiospora hydei - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. (903 bp)

LOCUS XM_024650915 903 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. ACCESSION XM_024650915 VERSION XM_024650915.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT...

XM_024650915.1 - Strongyloides ratti - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain and Protein of unknown function DUF2650 family-containing protein (SRAE_2000036100), partial mRNA. (3513 bp)

misc_feature 1342..1638 /locus_tag="SRAE_2000036100" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1450..1452,1492..1494,1531..1533,1543..1545, 1594..1596,1615..1617,1621..1623) /locus_tag="SRAE_2000036100" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...

XM_024651181.1 - Strongyloides ratti - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (14869 bp)

misc_feature 69..410 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(204..206,249..251,291..293,303..305,357..359, 378..380,384..386) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 543..1820 /gene="AGO3" /note="PIWI domain...

XM_023633508.1 - Equus caballus (horse) - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (14940 bp)

misc_feature 140..481 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(275..277,320..322,362..364,374..376,428..430, 449..451,455..457) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 614..1891 /gene="AGO3" /note="PIWI...

XM_023633506.1 - Equus caballus (horse) - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (14939 bp)

misc_feature 139..480 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(274..276,319..321,361..363,373..375,427..429, 448..450,454..456) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 613..1890 /gene="AGO3" /note="PIWI...

XM_023633498.1 - Equus caballus (horse) - NCBI

PREDICTED: Capra hircus argonaute 3, RISC catalytic component (AGO3), transcript variant X4, mRNA. (15262 bp)

misc_feature 247..588 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(382..384,427..429,469..471,481..483,535..537, 556..558,562..564) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 721..1998 /gene="AGO3" /note="PIWI...

XM_018041542.1 - Capra hircus (goat) - NCBI

PREDICTED: Orbicella faveolata protein argonaute-2-like (LOC110055455), transcript variant X2, mRNA. (2015 bp)

misc_feature 112..474 /gene="LOC110055455" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(268..270,313..315,358..360,370..372,424..426, 442..444,448..450) /gene="LOC110055455" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature <610..1545 /gene="...

XM_020761848.1 - Orbicella faveolata - NCBI

PREDICTED: Capra hircus argonaute 3, RISC catalytic component (AGO3), transcript variant X3, mRNA. (15188 bp)

misc_feature <104..151 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 152..514 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(308..310,353..355,395..397,407..409,461..463, 482..484,488..490) /gene="AGO3" /note="nucleic acid-binding...

XM_018041535.1 - Capra hircus (goat) - NCBI

PREDICTED: Amia calva protein argonaute-1 (LOC136763271), transcript variant X2, mRNA. (3235 bp)

misc_feature 277..429 /gene="LOC136763271" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 430..792 /gene="LOC136763271" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(586..588,631..633,673..675,685..687,739..741, 760..762,766..768) /gene="LOC136763271" /note...

XM_066717147.1 - Amia calva (bowfin) - NCBI

PREDICTED: Equus caballus argonaute RISC component 1 (AGO1), transcript variant X4, mRNA. (8167 bp)

misc_feature 222..374 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 375..737 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(531..533,576..578,618..620,630..632,684..686, 705..707,711..713) /gene="AGO1" /note="nucleic acid-binding...

XM_023633481.1 - Equus caballus (horse) - NCBI

PREDICTED: Phalaenopsis equestris protein argonaute MEL1-like (LOC110021703), transcript variant X2, mRNA. (2618 bp)

misc_feature 659..1009 /gene="LOC110021703" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(806..808,851..853,890..892,902..904,956..958, 977..979,983..985) /gene="LOC110021703" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1154..2455 /gene="...

XM_020720298.1 - Phalaenopsis equestris - NCBI

PREDICTED: Phalaenopsis equestris protein argonaute MEL1-like (LOC110021703), transcript variant X1, mRNA. (2624 bp)

XM_020720297.1 - Phalaenopsis equestris - NCBI

PREDICTED: Rhinolophus sinicus argonaute 3, RISC catalytic component (AGO3), transcript variant X9, mRNA. (5449 bp)

misc_feature 65..406 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(200..202,245..247,287..289,299..301,353..355, 374..376,380..382) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 539..1816 /gene="AGO3" /note="PIWI domain...

XM_019726519.1 - Rhinolophus sinicus (Chinese rufous horseshoe bat) - NCBI

PREDICTED: Asparagus officinalis protein argonaute PNH1 (LOC109826616), mRNA. (2276 bp)

misc_feature 25..369 /gene="LOC109826616" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(172..174,217..219,250..252,262..264,316..318, 337..339,343..345) /gene="LOC109826616" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 502..1854 /gene="...

XM_020393640.1 - Asparagus officinalis (garden asparagus) - NCBI

PREDICTED: Symphalangus syndactylus protein argonaute-3 (LOC129468935), transcript variant X5, mRNA. (9521 bp)

misc_feature 188..529 /gene="LOC129468935" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(323..325,368..370,410..412,422..424,476..478, 497..499,503..505) /gene="LOC129468935" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 662..1939 /gene="...

XM_055254951.2 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Rhinolophus sinicus argonaute 3, RISC catalytic component (AGO3), transcript variant X8, mRNA. (5506 bp)

misc_feature 122..463 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(257..259,302..304,344..346,356..358,410..412, 431..433,437..439) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 596..1873 /gene="AGO3" /note="PIWI...

XM_019726517.1 - Rhinolophus sinicus (Chinese rufous horseshoe bat) - NCBI

PREDICTED: Rhinolophus sinicus argonaute 3, RISC catalytic component (AGO3), transcript variant X7, mRNA. (5499 bp)

misc_feature 115..456 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(250..252,295..297,337..339,349..351,403..405, 424..426,430..432) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 589..1866 /gene="AGO3" /note="PIWI...

XM_019726516.1 - Rhinolophus sinicus (Chinese rufous horseshoe bat) - NCBI

PREDICTED: Rhinolophus sinicus argonaute 3, RISC catalytic component (AGO3), transcript variant X6, mRNA. (5581 bp)

misc_feature 197..538 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(332..334,377..379,419..421,431..433,485..487, 506..508,512..514) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 671..1948 /gene="AGO3" /note="PIWI...

XM_019726515.1 - Rhinolophus sinicus (Chinese rufous horseshoe bat) - NCBI

PREDICTED: Rhinolophus sinicus argonaute 3, RISC catalytic component (AGO3), transcript variant X5, mRNA. (5576 bp)

misc_feature 192..533 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(327..329,372..374,414..416,426..428,480..482, 501..503,507..509) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 666..1943 /gene="AGO3" /note="PIWI...

XM_019726514.1 - Rhinolophus sinicus (Chinese rufous horseshoe bat) - NCBI

PREDICTED: Gavialis gangeticus protein argonaute-1 (LOC109294022), transcript variant X3, mRNA. (2458 bp)

misc_feature 164..556 /gene="LOC109294022" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 584..736 /gene="LOC109294022" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 737..1099 /gene="LOC109294022" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_019512210.1 - Gavialis gangeticus (Gharial) - NCBI

PREDICTED: Rhinopithecus bieti protein argonaute-3 (LOC108537261), transcript variant X3, mRNA. (2697 bp)

misc_feature 98..439 /gene="LOC108537261" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(233..235,278..280,320..322,332..334,386..388, 407..409,413..415) /gene="LOC108537261" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 572..1849 /gene="...

XM_017884483.1 - Rhinopithecus bieti (black snub-nosed monkey) - NCBI

PREDICTED: Rhinopithecus bieti protein argonaute-3 (LOC108537261), transcript variant X2, mRNA. (3102 bp)

misc_feature 503..844 /gene="LOC108537261" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(638..640,683..685,725..727,737..739,791..793, 812..814,818..820) /gene="LOC108537261" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 977..2254 /gene="...

XM_017884481.1 - Rhinopithecus bieti (black snub-nosed monkey) - NCBI

PREDICTED: Crocodylus porosus protein argonaute-1 (LOC109318455), transcript variant X7, mRNA. (2491 bp)

misc_feature 197..589 /gene="LOC109318455" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 617..769 /gene="LOC109318455" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 770..1132 /gene="LOC109318455" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_019547741.1 - Crocodylus porosus (Australian saltwater crocodile) - NCBI

PREDICTED: Bos indicus protein argonaute-1 (LOC109556512), transcript variant X2, mRNA. (7884 bp)

misc_feature 132..473 /gene="LOC109556512" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(267..269,312..314,354..356,366..368,420..422, 441..443,447..449) /gene="LOC109556512" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 606..1883 /gene="...

XM_019957858.1 - Bos indicus (Bos taurus indicus) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC component 1 (AGO1), transcript variant X5, mRNA. (12428 bp)

misc_feature 330..482 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 483..845 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(639..641,684..686,726..728,738..740,792..794, 813..815,819..821) /gene="AGO1" /note="nucleic acid-binding...

XM_055254947.2 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Magallana gigas protein argonaute-2 (LOC105329532), transcript variant X6, mRNA. (2871 bp)

misc_feature 502..894 /gene="LOC105329532" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 922..1074 /gene="LOC105329532" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1075..1437 /gene="LOC105329532" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_066084865.1 - Magallana gigas (Pacific oyster) - NCBI

PREDICTED: Orbicella faveolata protein argonaute-2-like (LOC110055433), partial mRNA. (2833 bp)

misc_feature <19..147 /gene="LOC110055433" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 175..327 /gene="LOC110055433" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 331..696 /gene="LOC110055433" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_020761822.1 - Orbicella faveolata - NCBI

PREDICTED: Gavialis gangeticus protein argonaute-4 (LOC109294023), mRNA. (6373 bp)

misc_feature 282..536 /gene="LOC109294023" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 567..719 /gene="LOC109294023" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 720..1082 /gene="LOC109294023" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_019512211.1 - Gavialis gangeticus (Gharial) - NCBI

PREDICTED: Orbicella faveolata protein argonaute-2-like (LOC110055455), transcript variant X1, mRNA. (2363 bp)

XM_020761847.1 - Orbicella faveolata - NCBI

PREDICTED: Pocillopora verrucosa protein argonaute-2-like (LOC131778676), mRNA. (5796 bp)

misc_feature 260..652 /gene="LOC131778676" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 680..832 /gene="LOC131778676" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 836..1201 /gene="LOC131778676" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066166944.1 - Pocillopora verrucosa - NCBI

PREDICTED: Symphalangus syndactylus protein argonaute-3 (LOC129468935), transcript variant X4, mRNA. (20290 bp)

misc_feature 10957..11298 /gene="LOC129468935" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(11092..11094,11137..11139,11179..11181,11191..11193, 11245..11247,11266..11268,11272..11274) /gene="LOC129468935" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...

XM_055254950.2 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Phalaenopsis equestris protein argonaute MEL1-like (LOC110021710), mRNA. (2704 bp)

misc_feature <376..504 /gene="LOC110021710" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 532..690 /gene="LOC110021710" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 691..1038 /gene="LOC110021710" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_020720308.1 - Phalaenopsis equestris - NCBI

PREDICTED: Bos indicus protein argonaute-3 (LOC109556510), transcript variant X5, mRNA. (5830 bp)

misc_feature 2945..3286 /gene="LOC109556510" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(3080..3082,3125..3127,3167..3169,3179..3181, 3233..3235,3254..3256,3260..3262) /gene="LOC109556510" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...

XM_019957855.1 - Bos indicus (Bos taurus indicus) - NCBI

PREDICTED: Bos indicus protein argonaute-3 (LOC109556510), transcript variant X4, mRNA. (4057 bp)

misc_feature 1172..1513 /gene="LOC109556510" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1307..1309,1352..1354,1394..1396,1406..1408, 1460..1462,1481..1483,1487..1489) /gene="LOC109556510" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...

XM_019957854.1 - Bos indicus (Bos taurus indicus) - NCBI

PREDICTED: Equus caballus argonaute RISC component 4 (AGO4), mRNA. (6610 bp)

misc_feature 316..705 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 736..888 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 889..1251 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023633515.1 - Equus caballus (horse) - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (15513 bp)

misc_feature 227..511 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 539..691 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 692..1054 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023633491.1 - Equus caballus (horse) - NCBI

PREDICTED: Gavialis gangeticus argonaute 2, RISC catalytic component (AGO2), transcript variant X3, mRNA. (2736 bp)

misc_feature 108..335 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 363..515 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 516..878 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...

XM_019528209.1 - Gavialis gangeticus (Gharial) - NCBI

PREDICTED: Miscanthus floridulus protein argonaute 1B-like (LOC136508765), transcript variant X4, mRNA. (2532 bp)

misc_feature 291..443 /gene="LOC136508765" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 444..788 /gene="LOC136508765" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(591..593,636..638,669..671,681..683,735..737, 756..758,762..764) /gene="LOC136508765" /note...

XM_066503764.1 - Miscanthus floridulus - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 2 (AGO2), mRNA. (14656 bp)

misc_feature 392..616 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1159 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023649005.1 - Equus caballus (horse) - NCBI

PREDICTED: Tiliqua scincoides argonaute RISC catalytic component 2 (AGO2), mRNA. (6629 bp)

misc_feature 321..578 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 606..758 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 759..1121 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066625639.1 - Tiliqua scincoides - NCBI

PREDICTED: Nanorana parkeri argonaute 2, RISC catalytic component (AGO2), mRNA. (2797 bp)

misc_feature 312..569 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 597..749 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 750..1112 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_018563609.1 - Nanorana parkeri - NCBI

PREDICTED: Labrus bergylta argonaute RISC catalytic component 2 (ago2), mRNA. (10546 bp)

misc_feature 892..1116 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1144..1296 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1297..1659 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_020648066.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Rhinolophus sinicus argonaute 3, RISC catalytic component (AGO3), transcript variant X4, mRNA. (5726 bp)

misc_feature 168..320 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 321..683 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(477..479,522..524,564..566,576..578,630..632, 651..653,657..659) /gene="AGO3" /note="nucleic acid-binding...

XM_019726513.1 - Rhinolophus sinicus (Chinese rufous horseshoe bat) - NCBI

PREDICTED: Macaca fascicularis argonaute RISC catalytic component 3 (AGO3), transcript variant X11, mRNA. (19970 bp)

misc_feature 142..483 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(277..279,322..324,364..366,376..378,430..432, 451..453,457..459) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 616..1893 /gene="AGO3" /note="PIWI...

XM_015438461.3 - Macaca fascicularis (crab-eating macaque) - NCBI

Data Export:

Debug Info:

0.000 | 0.000 | search_start;
0.408 | 0.408 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.795 | 0.386 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.964 | 0.169 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.973 | 0.009 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

Summary:

Results:

Data Export:

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