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2024-04-25 00:07:23, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_043179352            1829 bp    mRNA    linear   PLN 22-NOV-2021
DEFINITION  Guyanagaster necrorhizus MCA 3950 PAZ domain-containing protein
            (BT62DRAFT_1078051), mRNA.
ACCESSION   XM_043179352
VERSION     XM_043179352.1
DBLINK      BioProject: PRJNA756328
            BioSample: SAMN05660966
KEYWORDS    RefSeq.
SOURCE      Guyanagaster necrorhizus MCA 3950
  ORGANISM  Guyanagaster necrorhizus MCA 3950
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Agaricomycetidae; Agaricales; Marasmiineae;
            Physalacriaceae; Guyanagaster.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Koch,R.A., Yoon,G., Arayal,U., Lail,K., Amirebrahimi,M.,
            Labutti,K., Lipzen,A., Riley,R., Barry,K., Henrissat,B.,
            Grigoriev,I.V., Herr,J.R. and Aime,M.C.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Adaptations for nitrogen fixation in a non-lichenized fungal
            sporocarp promotes dispersal by wood-feeding termites
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1829)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2021) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1829)
  AUTHORS   Ahrendt,S., Riley,R., Koch,R.A., Yoon,G., Arayal,U., Lail,K.,
            Amirebrahimi,M., Labutti,K., Lipzen,A., Barry,K., Henrissat,B.,
            Herr,J.R., Aime,M.C. and Grigoriev,I.V.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2020) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_025064899).
            
            ##Metadata-START##
            Organism Display Name :: Guyanagaster necrorhiza MCA 3950
            GOLD Stamp ID         :: Gp0036668
            ##Metadata-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Guyanagaster necrorhizus MCA 3950"
                     /mol_type="mRNA"
                     /strain="MCA 3950"
                     /culture_collection="CBS:138623"
                     /db_xref="taxon:1450536"
                     /chromosome="Unknown"
     gene            1..1829
                     /locus_tag="BT62DRAFT_1078051"
                     /db_xref="GeneID:66101646"
     CDS             208..1470
                     /locus_tag="BT62DRAFT_1078051"
                     /codon_start=1
                     /product="PAZ domain-containing protein"
                     /protein_id="XP_043037344.1"
                     /db_xref="GeneID:66101646"
                     /db_xref="InterPro:IPR003100"
                     /db_xref="InterPro:IPR014811"
                     /db_xref="JGIDB:Guyne1_1078051"
                     /translation="
MTPPRMAPGQRGGSPHPATQQRGGTPRGRGGARGGGAAGRQGGPSVPVASAVEAIGVRRPGLSTAGRASTVRVNACEMNVPDITVYHYDVAIKKTLRAALKMLFIEALQVQYPDVFIKAAVYDGKKNLYTSHRLDFGTGNSRQFNVTMMQGTGMSNFKITITKVREINMEVLSRYVAGQQSWDKNVSTALTALNIVIRMAPSLTYPFQVGSFYSDKIKVPLANTGLEAWQGYFPSVRPTLNRLIINIDISTGVMFKPGSLMETCLEFFTGNRGNNPDRYLRTSGPQALSPMQRHRLQTFLFGLNVEAESAAGVRKKYSIHKLSERDAISTVFTPAGGAQTNVAQYYAQANRPLRHANIICIQTANDAVIPLERCYILPGQLSRAELSLDATRAMVEFATKNPDDQLRAIKTGIQVHFLFY"
     misc_feature    337..>1434
                     /locus_tag="BT62DRAFT_1078051"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    574..798
                     /locus_tag="BT62DRAFT_1078051"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    838..975
                     /locus_tag="BT62DRAFT_1078051"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
ORIGIN      
tcgtccttgacaacttcttacccttgttcctatcgattggttgatacggagcgaacaaagcgccggctatacccggtagctttgaacgttcctctcggcatcgcggctagccacgagatataaagggaacacttgatttgattcagcatgggattgccttcctaaacagtcatctaaccttttttctactctgcatttactatcgatatgacaccgccacgaatggcacccggtcaacgaggagggtctccccaccctgctacccagcagcgtggaggaactcctcgagggcgaggtggcgcacgaggtggaggagccgctgggcgacaaggcgggcctagcgtccccgttgcatctgctgtagaggccatcggtgttcgtcgtccaggattgagtactgcgggtagggcaagtacagttcgtgtaaatgcatgcgaaatgaatgtccctgacatcaccgtttaccattatgacgtagcgattaagaagacactcagggcggctttgaaaatgctgttcatcgaggctctgcaagtccagtaccccgatgtctttatcaaagcagctgtgtatgatgggaagaagaatttgtatacgagccataggttggattttggtactgggaattctcgccagttcaacgtgactatgatgcaagggactggcatgtccaatttcaagatcaccatcacgaaggtgagagagattaacatggaagtgcttagcaggtacgtggctggtcagcagtcatgggacaaaaacgtctctactgctcttacagccttgaacattgtgattcggatggcgccctctctcacctatccattccaagtgggctcgttctatagtgacaagatcaaggtgccgctagccaatacagggttagaagcctggcaagggtactttccgtcagttaggcccactttgaaccgtctgatcatcaacatcgatatttccaccggcgtgatgttcaaacctggttcgctaatggaaacctgtcttgaattcttcaccgggaatcgtggaaacaatccagacaggtatttacgaacatctggaccccaggcgttatctccgatgcagagacatcgtttgcaaacatttctttttggcctcaacgtcgaggccgaatcggccgcaggtgtaaggaaaaaatattccattcacaaactgtctgagcgagatgctatttcgactgttttcactccggctggtggtgcacagaccaacgtggcgcaatactacgctcaggccaatcggcctctacggcatgccaatattatctgcatccagactgcgaatgatgccgtgattcctctagagcgatgttacattttacccggtcagctttctcgcgctgaactatctctggatgctacacgagccatggtcgagtttgcgaccaaaaaccccgatgaccaattgagggcaatcaagactgggattcaggttcattttttgttctactaatgttatttactcatattccctcaggttcttgcatttggacaatcccgatatgtccgcgactttggactagacatcaagaatgcttcctgacctatggatattccagcacagatcctcaatgcgccggagctcgaatacggacaaggattcaagcaaaagttggtttgaccgagggatgaagcttggaacctgtaatgtcatggatacttactaatatctatatttagtcttcactttcttcactcttctttttattttgatgcagtacaagaaatttctcgatgtttctctctaaatttctcctggtatcttttagaactttgcaataatataaaactgtatgaaaatactagaagaag
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]