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Previous release (v1)
2025-10-09 13:11:25, GGRNA : RefSeq release 232 (Sep, 2025)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
LOCUS NR_151620 847 bp RNA linear ROD 20-DEC-2019 DEFINITION Mus musculus prospero homeobox 1, opposite strand (Prox1os), long non-coding RNA. ACCESSION NR_151620 XR_373845 VERSION NR_151620.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK142161.1 and BE943617.1....
LOCUS NR_002839 1354 bp RNA linear ROD 18-OCT-2021 DEFINITION Mus musculus distal-less homeobox 6, opposite strand 2 (Dlx6os2), long non-coding RNA. ACCESSION NR_002839 VERSION NR_002839.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AF022079.1 and AC122240.4. On...
LOCUS NR_027920 2188 bp RNA linear ROD 18-OCT-2021 DEFINITION Mus musculus msh homeobox 1 opposite strand (Msx1os), antisense RNA. ACCESSION NR_027920 VERSION NR_027920.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC114671.14. Sequence Note: The RefSeq transcript...
LOCUS NR_002854 2793 bp RNA linear ROD 17-OCT-2021 DEFINITION Mus musculus distal-less homeobox 1, antisense (Dlx1as), antisense RNA. ACCESSION NR_002854 VERSION NR_002854.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK132348.1. On Apr 25, 2009 this sequence...
CDS 127..822 /gene="Tgif2lx2" /codon_start=1 /product="TGFB-induced factor homeobox 2-like, X-linked 2" /protein_id="NP_001136222.1" /db_xref="CCDS:CCDS53177.1" /db_xref="GeneID:100039551" /db_xref="MGI:MGI:3800824" /translation="MEEAEGSPEETQDFMKYYSSFGIRLERTCKMKFHDSRELPRGNMLPLKSVKILRDWLCEHQFNAYPTVADKRMLSKNTDLSYLQVSNWFVNIRKHLRWEIRYKPYSLSHEGQAANAAQKQHSNPSEEVKTQFNENADMQDLPLPIRQDSEEKVPYLESSPNQKVIAEDNIEKEEKISITEPWSSPEVAWPEEKPDFSSFYMLVDVAVQKAKEMEEQKKQNPNPQGPQQQFM" misc_feature 301..408 /gene="Tgif2lx2" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN //...
LOCUS NM_001024850 760 bp mRNA linear ROD 30-APR-2024 DEFINITION Mus musculus reproductive homeobox 10 (Rhox10), mRNA. ACCESSION NM_001024850 XM_486665 VERSION NM_001024850.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata;...M., Shum,E.Y., Phan,M.H., Plank,T.M., Richardson,M.E., Ramaiah,M., Sridhar,V., de Rooij,D.G., Orwig,K.E., Zhang,K. and Wilkinson,M.F. TITLE The Homeobox Transcription Factor RHOX10 Drives Mouse Spermatogonial Stem Cell Establishment JOURNAL Cell Rep 17 (1), 149-164 (2016) PUBMED 27681428 REMARK...
LOCUS NR_166585 626 bp RNA linear ROD 23-APR-2024 DEFINITION Mus musculus LIM homeobox 5, antisense 1 (Lhx5as1), long non-coding RNA. ACCESSION NR_166585 XR_878744 VERSION NR_166585.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC129553.10. On Mar 28, 2020 this...
LOCUS NM_007957 1615 bp mRNA linear ROD 24-SEP-2024 DEFINITION Mus musculus extraembryonic, spermatogenesis, homeobox 1 (Esx1), mRNA. ACCESSION NM_007957 XM_906956 VERSION NM_007957.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AF085715.1. On Sep...
LOCUS NM_183389 2146 bp mRNA linear ROD 04-APR-2024 DEFINITION Mus musculus double homeobox B-like 1 (Duxbl1), mRNA. ACCESSION NM_183389 XM_918041 VERSION NM_183389.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC055782.1 and AK141686.1. On Mar...
Synonym: 1110051B16Rik; Duxbl; Duxbl2; Duxbl3; Duxl; Gm10391; Gm10394
NM_183389.2 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NR_151670 736 bp RNA linear ROD 27-MAY-2024 DEFINITION Mus musculus pre B cell leukemia homeobox 4 (Pbx4), transcript variant 5, non-coding RNA. ACCESSION NR_151670 VERSION NR_151670.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC158564.7, BY097743.1 and...
LOCUS NR_151668 997 bp RNA linear ROD 27-MAY-2024 DEFINITION Mus musculus pre B cell leukemia homeobox 4 (Pbx4), transcript variant 2, non-coding RNA. ACCESSION NR_151668 VERSION NR_151668.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC158564.7 and AK038786.1. ##...
LOCUS NR_151669 890 bp RNA linear ROD 27-MAY-2024 DEFINITION Mus musculus pre B cell leukemia homeobox 4 (Pbx4), transcript variant 3, non-coding RNA. ACCESSION NR_151669 NM_030555 VERSION NR_151669.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC158564.7,...
LOCUS NM_001034869 1813 bp mRNA linear ROD 28-AUG-2024 DEFINITION Mus musculus double homeobox family member 4 (Duxf4), mRNA. ACCESSION NM_001034869 XM_142899 VERSION NM_001034869.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AK145460.1. On Apr...
LOCUS NR_038085 1305 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 7, long non-coding RNA. ACCESSION NR_038085 VERSION NR_038085.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 1305) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_015387 1384 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 6, long non-coding RNA. ACCESSION NR_015387 VERSION NR_015387.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 1384) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_015385 3240 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 4, long non-coding RNA. ACCESSION NR_015385 XM_001479660 XM_001481207 VERSION NR_015385.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus...REFERENCE 1 (bases 1 to 3240) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_015386 3311 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 3, long non-coding RNA. ACCESSION NR_015386 VERSION NR_015386.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 3311) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_038083 4436 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 2, long non-coding RNA. ACCESSION NR_038083 VERSION NR_038083.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 4436) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_038086 1117 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 8, long non-coding RNA. ACCESSION NR_038086 VERSION NR_038086.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 1117) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_038082 5352 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 1, long non-coding RNA. ACCESSION NR_038082 VERSION NR_038082.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 5352) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NR_038084 3229 bp RNA linear ROD 17-SEP-2024 DEFINITION Mus musculus SIX homeobox 3, opposite strand 1 (Six3os1), transcript variant 5, long non-coding RNA. ACCESSION NR_038084 VERSION NR_038084.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa;...REFERENCE 1 (bases 1 to 3229) AUTHORS Song,X., Chen,H., Shang,Z., Du,H., Li,Z., Wen,Y., Liu,G., Qi,D., You,Y., Yang,Z., Zhang,Z. and Xu,Z. TITLE Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons JOURNAL Neurosci Bull 37 (7), 985-998 (2021) PUBMED 34014554...
LOCUS NM_013601 2162 bp mRNA linear ROD 03-APR-2025 DEFINITION Mus musculus msh homeobox 2 (Msx2), mRNA. ACCESSION NM_013601 VERSION NM_013601.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK133846.1 and AV230604.1. On Sep 14, 2006 this sequence...
LOCUS NM_207533 2271 bp mRNA linear ROD 30-APR-2024 DEFINITION Mus musculus developing brain homeobox 2 (Dbx2), mRNA. ACCESSION NM_207533 XM_356793 VERSION NM_207533.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata;...A., Licursi,V., Nisi,P.S., Fiore,M., D'Angelo,S., Biagioni,S., Negri,R., Rugg-Gunn,P.J., Cacci,E. and Lupo,G. TITLE Dbx2, an Aging-Related Homeobox Gene, Inhibits the Proliferation of Adult Neural Progenitors JOURNAL Stem Cell Rev Rep 19 (8), 2837-2851 (2023) PUBMED 37605090 REMARK GeneRIF: Dbx2, an...
LOCUS NR_038057 624 bp RNA linear ROD 23-APR-2024 DEFINITION Mus musculus LIM homeobox 1, opposite strand (Lhx1os), long non-coding RNA. ACCESSION NR_038057 XR_106217 XR_106582 VERSION NR_038057.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL603708.13. On or...
obesity. REFERENCE 3 (bases 1 to 1323) AUTHORS Simon,R., Lufkin,T. and Bergemann,A.D. TITLE Homeobox gene Sax2 deficiency causes an imbalance in energy homeostasis JOURNAL Dev Dyn 236 (10), 2792-2799 (2007) PUBMED 17879320 REMARK GeneRIF: These data strongly suggest that Sax2 is required for the coordinated crosstalk of factors involved in the maintenance of energy homeostasis. REFERENCE 4 (bases 1 to 1323) AUTHORS Simon,R. and Lufkin,T. TITLE Postnatal lethality in mice lacking the Sax2 homeobox gene homologous to Drosophila S59/slouch: evidence for positive and negative autoregulation...
LOCUS NM_009123 1903 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus NK1 homeobox 2 (Nkx1-2), mRNA. ACCESSION NM_009123 VERSION NM_009123.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF222444.1. On Jun 19, 2003 this sequence version...
LOCUS NM_001025570 4098 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus paired related homeobox 1 (Prrx1), transcript variant 3, mRNA. ACCESSION NM_001025570 VERSION NM_001025570.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK084387.1 and AC120173.9....
Synonym: A230024N07Rik; K-2; mHox; MHox1; Pmx; Pmx1; Prx1
NM_001025570.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NR_015388 4266 bp RNA linear ROD 02-MAY-2024 DEFINITION Mus musculus distal-less homeobox 6, opposite strand 1 (Dlx6os1), transcript variant 1, long non-coding RNA. ACCESSION NR_015388 VERSION NR_015388.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
Synonym: A230055N17Rik; Dlx6as1; Evf-1; Evf-2; Evf1; Evf1/2; Evf2; Shhrs
NR_015388.2 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NM_009392 1434 bp mRNA linear ROD 28-APR-2025 DEFINITION Mus musculus T cell leukemia, homeobox 2 (Tlx2), mRNA. ACCESSION NM_009392 XM_620336 VERSION NM_009392.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK013072.1, M75953.1 and AC134899.4....
Synonym: Enx; Hox11L.1; Hox11l1; NCX; Ncx1; Tlx1l1; Tlx1l2
NM_009392.2 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NR_131758 583 bp RNA linear ROD 05-AUG-2023 DEFINITION Mus musculus homeobox B5 and homeobox B6, opposite strand (Hoxb5os), long non-coding RNA. ACCESSION NR_131758 VERSION NR_131758.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AK002860.1. ##Evidence-...
LOCUS NR_155495 4200 bp RNA linear ROD 02-MAY-2024 DEFINITION Mus musculus distal-less homeobox 6, opposite strand 1 (Dlx6os1), transcript variant 2, long non-coding RNA. ACCESSION NR_155495 VERSION NR_155495.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
Synonym: A230055N17Rik; Dlx6as1; Evf-1; Evf-2; Evf1; Evf1/2; Evf2; Shhrs
NR_155495.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NM_007524 1437 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus NK3 homeobox 2 (Nkx3-2), mRNA. ACCESSION NM_007524 VERSION NM_007524.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from U87957.1 and BC145874.1. On Nov 24, 2007 this sequence...
LOCUS NR_155496 4164 bp RNA linear ROD 02-MAY-2024 DEFINITION Mus musculus distal-less homeobox 6, opposite strand 1 (Dlx6os1), transcript variant 3, long non-coding RNA. ACCESSION NR_155496 VERSION NR_155496.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
Synonym: A230055N17Rik; Dlx6as1; Evf-1; Evf-2; Evf1; Evf1/2; Evf2; Shhrs
NR_155496.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NM_001025567 4039 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus diencephalon/mesencephalon homeobox 1 (Dmbx1), transcript variant 2, mRNA. ACCESSION NM_001025567 VERSION NM_001025567.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
LOCUS NM_007867 1820 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus distal-less homeobox 4 (Dlx4), mRNA. ACCESSION NM_007867 VERSION NM_007867.4 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL645850.6. On Apr 8, 2008 this sequence version...
LOCUS NM_130865 4054 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus diencephalon/mesencephalon homeobox 1 (Dmbx1), transcript variant 1, mRNA. ACCESSION NM_130865 VERSION NM_130865.3 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY732319.1, CN455087.1 and...
LOCUS NM_008818 869 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus reproductive homeobox 5 (Rhox5), mRNA. ACCESSION NM_008818 VERSION NM_008818.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK146449.1 and DQ058642.1. On Apr 7, 2006 this...
LOCUS NM_175686 4983 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus paired related homeobox 1 (Prrx1), transcript variant 2, mRNA. ACCESSION NM_175686 VERSION NM_175686.3 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK084387.1 and BC092372.1. On Jul...
Synonym: A230024N07Rik; K-2; mHox; MHox1; Pmx; Pmx1; Prx1
NM_175686.3 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NM_008584 2360 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus mesenchyme homeobox 2 (Meox2), mRNA. ACCESSION NM_008584 VERSION NM_008584.4 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT010456.8 and AC159640.2. On Apr 11, 2018 this...
LOCUS NM_011127 4911 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus paired related homeobox 1 (Prrx1), transcript variant 1, mRNA. ACCESSION NM_011127 VERSION NM_011127.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK084387.1 and...
Synonym: A230024N07Rik; K-2; mHox; MHox1; Pmx; Pmx1; Prx1
NM_011127.2 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
LOCUS NM_009501 3092 bp mRNA linear ROD 29-APR-2025 DEFINITION Mus musculus ventral anterior homeobox 1 (Vax1), mRNA. ACCESSION NM_009501 XM_906499 VERSION NM_009501.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC124459.5. On Jun 25, 2019 this sequence version...
of Homeobox A1 Relieves Ovalbumin-Induced Asthma in Mice and Is Associated with Blocking of the NF-kappaB Signaling Pathway. REFERENCE 5 (bases 1 to 2047) AUTHORS Petrelli,B., Ozturk,A., Pind,M., Ayele,H., Fainsod,A. and Hicks,G.G. TITLE Genetically programmed retinoic acid deficiency during gastrulation phenocopies most known developmental defects due to acute prenatal alcohol exposure in FASD JOURNAL Front Cell Dev Biol 11, 1208279 (2023) PUBMED 37397253 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 2047) AUTHORS Scott,M.P. TITLE Vertebrate homeobox gene nomenclature JOURNAL...
LOCUS NM_007674 1595 bp mRNA linear ROD 28-APR-2025 DEFINITION Mus musculus caudal type homeobox 4 (Cdx4), mRNA. ACCESSION NM_007674 VERSION NM_007674.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL669964.18. On Apr 27, 2007 this sequence version...
LOCUS NM_001164077 1674 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus TGFB-induced factor homeobox 1 (Tgif1), transcript variant 5, mRNA. ACCESSION NM_001164077 VERSION NM_001164077.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 523..639 /gene="Tgif1" /gene_synonym="Tgif" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 607..1674 /gene="Tgif1" /gene_synonym="Tgif" /inference="alignment:Splign:2.1.0"...
LOCUS NM_011384 4019 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus sine oculis-related homeobox 6 (Six6), mRNA. ACCESSION NM_011384 VERSION NM_011384.5 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC159823.2 and AK029309.1. On Sep 15, 2015 this sequence...
LOCUS NM_145707 1603 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus oocyte specific homeobox 3 (Obox3), mRNA. ACCESSION NM_145707 XM_908582 VERSION NM_145707.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK139750.1. On May 17, 2008 this...
LOCUS NM_001164074 1380 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus TGFB-induced factor homeobox 1 (Tgif1), transcript variant 3, mRNA. ACCESSION NM_001164074 VERSION NM_001164074.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 229..345 /gene="Tgif1" /gene_synonym="Tgif" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 313..1380 /gene="Tgif1" /gene_synonym="Tgif" /inference="alignment:Splign:2.1.0"...
LOCUS NM_001164075 1720 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus TGFB-induced factor homeobox 1 (Tgif1), transcript variant 1, mRNA. ACCESSION NM_001164075 VERSION NM_001164075.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 569..685 /gene="Tgif1" /gene_synonym="Tgif" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 426..652 /gene="Tgif1" /gene_synonym="Tgif" /inference="alignment:Splign:2.1.0"...
LOCUS NM_001164076 1446 bp mRNA linear ROD 27-APR-2025 DEFINITION Mus musculus TGFB-induced factor homeobox 1 (Tgif1), transcript variant 4, mRNA. ACCESSION NM_001164076 VERSION NM_001164076.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 295..411 /gene="Tgif1" /gene_synonym="Tgif" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 379..1446 /gene="Tgif1" /gene_synonym="Tgif" /inference="alignment:Splign:2.1.0"...
LOCUS NM_001360218 1010 bp mRNA linear ROD 08-APR-2025 DEFINITION Mus musculus NK2 homeobox 6 (Nkx2-6), transcript variant 2, mRNA. ACCESSION NM_001360218 XM_006518679 VERSION NM_001360218.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT025562.10, AK006401.1 and...
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Redirect URI : https://ggrna.dbcls.jp/mm/homeobox
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0.000 | 0.000 | search_start;
0.182 | 0.182 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Mus musculus (house mouse)?to=0&format=json
0.342 | 0.160 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Mus musculus (house mouse)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.347 | 0.006 | cgi_end;
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Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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