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2025-08-21 17:06:58, GGRNA.v2 : RefSeq release 230 (May, 2025)

LOCUS       NM_001034869            1813 bp    mRNA    linear   ROD 28-AUG-2024
DEFINITION  Mus musculus double homeobox family member 4 (Duxf4), mRNA.
ACCESSION   NM_001034869 XM_142899
VERSION     NM_001034869.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Yang,G., Zhang,L., Liu,W., Qiao,Z., Shen,S., Zhu,Q., Gao,R.,
            Wang,M., Wang,M., Li,C., Liu,M., Sun,J., Wang,L., Liu,W., Cui,X.,
            Zhao,K., Zang,R., Chen,M., Liang,Z., Wang,L., Kou,X., Zhao,Y.,
            Wang,H., Wang,Y., Gao,S., Chen,J. and Jiang,C.
  TITLE     Dux-Mediated Corrections of Aberrant H3K9ac during 2-Cell Genome
            Activation Optimize Efficiency of Somatic Cell Nuclear Transfer
  JOURNAL   Cell Stem Cell 28 (1), 150-163 (2021)
   PUBMED   33049217
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Guo,M., Zhang,Y., Zhou,J., Bi,Y., Xu,J., Xu,C., Kou,X., Zhao,Y.,
            Li,Y., Tu,Z., Liu,K., Lin,J., Yang,P., Gao,S. and Wang,Y.
  TITLE     Precise temporal regulation of Dux is important for embryo
            development
  JOURNAL   Cell Res 29 (11), 956-959 (2019)
   PUBMED   31591446
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AK145460.1.
            
            On Apr 6, 2007 this sequence version replaced NM_001034869.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK145460.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1813              AK145460.1         2-1814
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 29.29 cM"
     gene            1..1813
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /note="double homeobox family member 4"
                     /db_xref="GeneID:245263"
                     /db_xref="MGI:MGI:3645498"
     exon            1..1813
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    202..204
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /note="upstream in-frame stop codon"
     CDS             271..1146
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /codon_start=1
                     /product="uncharacterized protein LOC245263"
                     /protein_id="NP_001030041.1"
                     /db_xref="CCDS:CCDS48564.1"
                     /db_xref="GeneID:245263"
                     /db_xref="MGI:MGI:3645498"
                     /translation="
MRSSSRRPHTGLTLSQRRILAQAFERNPRPGCATREELALETGLPEDMIHTWLKNKRARRHRRGRPTAQDQDLLASQVSGGAPAGPVGRGHEVAQESSLPQEEAGSTGMDTTSTSYSPSFCRESQLSQVSQPRGAGQKEVPTQAGNVGPLELLLDELQDEVQVKEHVPDPLDLGSDPGAREPEGSQDSLQSLDEAANSGWHTSVPSISSTLCRESQPSQVAQPSGPGQAQAPTQSGFIDPLELFLDELLTEVQLEEQGPAPVNVEETGEQMDTTPELPLTPEEYQTLLDML"
     misc_feature    286..438
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; Region:
                     homeodomain; cd00086"
                     /db_xref="CDD:238039"
     misc_feature    order(292..294,301..303,421..423,430..435)
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     polyA_site      1813
                     /gene="Duxf4"
                     /gene_synonym="EG245263; Gm4981"
                     /note="putative"
ORIGIN      
acaggaatcccggcagcgcaggaagacggtttggcaggacttgcaagaggaggccctatcagctttcaactagaagagatacctgtacttttaggtgctggccaggcaaatggggatcccagattgctgaatttgggtgtggtttctgaattgcaggaaatcgcactggagggggaggggcatgcctcaaagaggttcacctgaggctccaaccaaatagcctcaccacagctccaggaagaactaggctccagggtacagggtggaggcatgcgctcatccagcagaaggcctcacactggactcactttgtcacagcgcaggatcctagcacaagcatttgagaggaacccacgaccaggctgtgctaccagggaggagctggcacttgagacagggttgcccgaggacatgatccacacatggttgaaaaacaaaagagctcggcgccacaggaggggcaggcccacagctcaagatcaagacttgctggcctcacaagtgtccggtggggcccctgcaggtccggtaggcaggggccatgaagttgcacaggagagctcattgccacaggaagaagcaggaagtacgggcatggatactacaagcaccagctactcgccctctttctgcagagagtcccaactttcccaagtgtcacagccccgtggagcaggccaaaaagaggtccccactcaagcaggcaacgtaggccctctggaacttctccttgatgaactgcaggacgaagtacaggtgaaagagcatgtgccagaccctttggatttgggtagtgatcctggcgccagggagcctgaaggttcccaggacagcttacagagcctggatgaagcagcaaattcaggctggcatacctcggtcccgagcatctcgtcaaccttgtgcagagagtcccagccttcccaagtggcacagccctctggaccaggacaagcacaggcccccactcaaagtgggttcatagaccctctggagctctttctcgatgaactgctgactgaagtccaacttgaggagcaggggcctgcccctgtgaatgtggaggaaacaggggagcaaatggacacaacacctgagctgcctctcaccccagaagaatatcagactcttctagatatgctctgactccctgacagtaccccttgcatctagacacccgcgaggccaaatcctaaagagacccaatttggaactggagaaggtacccatttcagcaaggatgtgcacaaaaatgcaactccagtgacttcccgaaatgcaaggtgtcttgctaactataaggatggattgcaggtggggataataatgaagtgccttctgcagcgcccagggattaggaaatcagccctgaaagtgagagactctgctacagggacagatggagaggccaatagtgactcctcaacaacaaggagcctaaagataaccccaaaagaagggccacaccaagtgactggctccagtggaccccaggaaatcacacgggacactaggactaggcttcactacagaggacacacactccctgagggcaatcgggagagtggactccttccctgggttgtatggactgctgctattcttacagatgcttcgtgcagagctgtgcaaggttttacaggccagtcttttaatatctactacccataggtcttttgtttgttttctttttctttttcactttctttttcatttttttttctttatttttatgggtgggttgtctttgctgggtttggtttggttctgtgtagtttgtttccattgctttcaataaagtttattgattttg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]