2025-08-21 17:06:58, GGRNA.v2 : RefSeq release 230 (May, 2025)
LOCUS NM_001034869 1813 bp mRNA linear ROD 28-AUG-2024 DEFINITION Mus musculus double homeobox family member 4 (Duxf4), mRNA. ACCESSION NM_001034869 XM_142899 VERSION NM_001034869.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1813) AUTHORS Yang,G., Zhang,L., Liu,W., Qiao,Z., Shen,S., Zhu,Q., Gao,R., Wang,M., Wang,M., Li,C., Liu,M., Sun,J., Wang,L., Liu,W., Cui,X., Zhao,K., Zang,R., Chen,M., Liang,Z., Wang,L., Kou,X., Zhao,Y., Wang,H., Wang,Y., Gao,S., Chen,J. and Jiang,C. TITLE Dux-Mediated Corrections of Aberrant H3K9ac during 2-Cell Genome Activation Optimize Efficiency of Somatic Cell Nuclear Transfer JOURNAL Cell Stem Cell 28 (1), 150-163 (2021) PUBMED 33049217 REFERENCE 2 (bases 1 to 1813) AUTHORS Guo,M., Zhang,Y., Zhou,J., Bi,Y., Xu,J., Xu,C., Kou,X., Zhao,Y., Li,Y., Tu,Z., Liu,K., Lin,J., Yang,P., Gao,S. and Wang,Y. TITLE Precise temporal regulation of Dux is important for embryo development JOURNAL Cell Res 29 (11), 956-959 (2019) PUBMED 31591446 COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AK145460.1. On Apr 6, 2007 this sequence version replaced NM_001034869.1. ##Evidence-Data-START## Transcript is intronless :: AK145460.1 [ECO:0000345] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1813 AK145460.1 2-1814 FEATURES Location/Qualifiers source 1..1813 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="10" /map="10 29.29 cM" gene 1..1813 /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /note="double homeobox family member 4" /db_xref="GeneID:245263" /db_xref="MGI:MGI:3645498" exon 1..1813 /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /inference="alignment:Splign:2.1.0" misc_feature 202..204 /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /note="upstream in-frame stop codon" CDS 271..1146 /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /codon_start=1 /product="uncharacterized protein LOC245263" /protein_id="NP_001030041.1" /db_xref="CCDS:CCDS48564.1" /db_xref="GeneID:245263" /db_xref="MGI:MGI:3645498" /translation="
MRSSSRRPHTGLTLSQRRILAQAFERNPRPGCATREELALETGLPEDMIHTWLKNKRARRHRRGRPTAQDQDLLASQVSGGAPAGPVGRGHEVAQESSLPQEEAGSTGMDTTSTSYSPSFCRESQLSQVSQPRGAGQKEVPTQAGNVGPLELLLDELQDEVQVKEHVPDPLDLGSDPGAREPEGSQDSLQSLDEAANSGWHTSVPSISSTLCRESQPSQVAQPSGPGQAQAPTQSGFIDPLELFLDELLTEVQLEEQGPAPVNVEETGEQMDTTPELPLTPEEYQTLLDML"
misc_feature 286..438 /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /note="Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner; Region: homeodomain; cd00086" /db_xref="CDD:238039" misc_feature order(292..294,301..303,421..423,430..435) /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" polyA_site 1813 /gene="Duxf4" /gene_synonym="EG245263; Gm4981" /note="putative" ORIGIN
acaggaatcccggcagcgcaggaagacggtttggcaggacttgcaagaggaggccctatcagctttcaactagaagagatacctgtacttttaggtgctggccaggcaaatggggatcccagattgctgaatttgggtgtggtttctgaattgcaggaaatcgcactggagggggaggggcatgcctcaaagaggttcacctgaggctccaaccaaatagcctcaccacagctccaggaagaactaggctccagggtacagggtggaggcatgcgctcatccagcagaaggcctcacactggactcactttgtcacagcgcaggatcctagcacaagcatttgagaggaacccacgaccaggctgtgctaccagggaggagctggcacttgagacagggttgcccgaggacatgatccacacatggttgaaaaacaaaagagctcggcgccacaggaggggcaggcccacagctcaagatcaagacttgctggcctcacaagtgtccggtggggcccctgcaggtccggtaggcaggggccatgaagttgcacaggagagctcattgccacaggaagaagcaggaagtacgggcatggatactacaagcaccagctactcgccctctttctgcagagagtcccaactttcccaagtgtcacagccccgtggagcaggccaaaaagaggtccccactcaagcaggcaacgtaggccctctggaacttctccttgatgaactgcaggacgaagtacaggtgaaagagcatgtgccagaccctttggatttgggtagtgatcctggcgccagggagcctgaaggttcccaggacagcttacagagcctggatgaagcagcaaattcaggctggcatacctcggtcccgagcatctcgtcaaccttgtgcagagagtcccagccttcccaagtggcacagccctctggaccaggacaagcacaggcccccactcaaagtgggttcatagaccctctggagctctttctcgatgaactgctgactgaagtccaacttgaggagcaggggcctgcccctgtgaatgtggaggaaacaggggagcaaatggacacaacacctgagctgcctctcaccccagaagaatatcagactcttctagatatgctctgactccctgacagtaccccttgcatctagacacccgcgaggccaaatcctaaagagacccaatttggaactggagaaggtacccatttcagcaaggatgtgcacaaaaatgcaactccagtgacttcccgaaatgcaaggtgtcttgctaactataaggatggattgcaggtggggataataatgaagtgccttctgcagcgcccagggattaggaaatcagccctgaaagtgagagactctgctacagggacagatggagaggccaatagtgactcctcaacaacaaggagcctaaagataaccccaaaagaagggccacaccaagtgactggctccagtggaccccaggaaatcacacgggacactaggactaggcttcactacagaggacacacactccctgagggcaatcgggagagtggactccttccctgggttgtatggactgctgctattcttacagatgcttcgtgcagagctgtgcaaggttttacaggccagtcttttaatatctactacccataggtcttttgtttgttttctttttctttttcactttctttttcatttttttttctttatttttatgggtgggttgtctttgctgggtttggtttggttctgtgtagtttgtttccattgctttcaataaagtttattgattttg
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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