GGRNA | Results

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Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), mRNA. (4129 bp)

single sample supports all introns SAMN04111056, SAMN04111070 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..4129 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="2L" /map="2L" gene 1..4129 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog" /db_xref="GeneID:734630" /db_xref="Xenbase:XB-GENE-1006885" exon 1..105 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /inference="alignment:Splign:2.1.0" CDS 21..2675 /gene="ago4.L" /gene_synonym="ago4;...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
NM_001096105.1 - Xenopus laevis (African clawed frog) - NCBI

Xenopus tropicalis argonaute 2, RISC catalytic component (ago2), mRNA. (3687 bp)

single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3687 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="6" /map="6" gene 1..3687 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="argonaute 2, RISC catalytic component" /db_xref="GeneID:448205" /db_xref="Xenbase:XB-GENE-1001916" exon 1..260 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /inference="alignment:Splign:2.1.0" misc_feature 122..124 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="upstream in-frame stop...

Synonym: Argonaute2; eif2c2
NM_001004877.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase

Xenopus laevis argonaute 2, RISC catalytic component L homeolog (ago2.L), mRNA. (3298 bp)

all introns SAMD00012418, SAMD00012419 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3298 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="6L" /map="6L" gene 1..3298 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="argonaute 2, RISC catalytic component L homeolog" /db_xref="GeneID:446823" /db_xref="Xenbase:XB-GENE-1001922" misc_feature 140..142 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="upstream in-frame stop codon" CDS 263..2851 /gene="ago2.L" /gene_synonym="ago2; ago2....

Synonym: ago2; ago2.S; Argonaute2; eif2c1; eif2c2
NM_001093519.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Danio rerio argonaute RISC catalytic component 3b (ago3b), transcript variant X1, mRNA. (8017 bp)

Fibroblasts and whole tissue" /dev_stage="adult" /ecotype="United States" /geo_loc_name="USA" /collection_date="2022-07-19" /collected_by="National Human Genome Research Institute" /genotype="Double heterozygous" gene 1..8017 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7166 long SRA reads, 12 Proteins" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452"...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
XM_005159456.4 - Danio rerio (zebrafish) - NCBI - UCSC

Danio rerio argonaute RISC catalytic component 3b (ago3b), mRNA. (3062 bp)

JBMGRA0119.1 11782643-11782751 FEATURES Location/Qualifiers source 1..3062 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" /map="19" gene 1..3062 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452" exon 1..498 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /inference="alignment:Splign:2.1.0" misc_feature 477..479 /gene="ago3b" /gene_synonym="ago3;...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
NM_001160028.1 - Danio rerio (zebrafish) - NCBI - UCSC

PREDICTED: Danio rerio argonaute RISC catalytic component 3b (ago3b), transcript variant X2, mRNA. (1926 bp)

Fibroblasts and whole tissue" /dev_stage="adult" /ecotype="United States" /geo_loc_name="USA" /collection_date="2022-07-19" /collected_by="National Human Genome Research Institute" /genotype="Double heterozygous" gene 1..1926 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 72 long SRA reads, 4 Proteins" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452" misc_feature...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
XM_073930997.1 - Danio rerio (zebrafish) - NCBI - UCSC

Malus domestica protein argonaute 4-like (LOC103427265), mRNA. (2820 bp)

LOCUS NM_001328878 2820 bp mRNA linear PLN 13-JAN-2025 DEFINITION Malus domestica protein argonaute 4-like (LOC103427265), mRNA. ACCESSION NM_001328878 VERSION NM_001328878.1 KEYWORDS RefSeq. SOURCE Malus domestica (apple) ORGANISM Malus domestica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KU167607.1. ##...

Synonym: AGO4.1; argonaute
NM_001328878.1 - Malus domestica (apple) - NCBI

PREDICTED: Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), transcript variant X2, mRNA. (8762 bp)

source 1..8762 /organism="Xenopus laevis" /mol_type="mRNA" /strain="J_2021" /db_xref="taxon:8355" /chromosome="2L" /sex="female" /tissue_type="Erythrocytes" /dev_stage="adult" /collection_date="06-Jul-2016" /collected_by="Jessica Lyons" gene 1..8762 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
XM_041581103.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), transcript variant X1, mRNA. (8830 bp)

source 1..8830 /organism="Xenopus laevis" /mol_type="mRNA" /strain="J_2021" /db_xref="taxon:8355" /chromosome="2L" /sex="female" /tissue_type="Erythrocytes" /dev_stage="adult" /collection_date="06-Jul-2016" /collected_by="Jessica Lyons" gene 1..8830 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
XM_041581102.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X4, mRNA. (3562 bp)

LOCUS XM_070817975 3562 bp mRNA linear PLN 07-JAN-2025 DEFINITION PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X4, mRNA. ACCESSION XM_070817975 VERSION XM_070817975.1 DBLINK BioProject: PRJNA1194184 KEYWORDS RefSeq. SOURCE Malus domestica (apple) ORGANISM Malus domestica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis...

Synonym: AGO4.1; argonaute
XM_070817975.1 - Malus domestica (apple) - NCBI

PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X3, mRNA. (3505 bp)

LOCUS XM_070817974 3505 bp mRNA linear PLN 07-JAN-2025 DEFINITION PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X3, mRNA. ACCESSION XM_070817974 VERSION XM_070817974.1 DBLINK BioProject: PRJNA1194184 KEYWORDS RefSeq. SOURCE Malus domestica (apple) ORGANISM Malus domestica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis...

Synonym: AGO4.1; argonaute
XM_070817974.1 - Malus domestica (apple) - NCBI

PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X2, mRNA. (3830 bp)

LOCUS XM_008365332 3830 bp mRNA linear PLN 07-JAN-2025 DEFINITION PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X2, mRNA. ACCESSION XM_008365332 VERSION XM_008365332.4 DBLINK BioProject: PRJNA1194184 KEYWORDS RefSeq. SOURCE Malus domestica (apple) ORGANISM Malus domestica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis...

Synonym: AGO4.1; argonaute
XM_008365332.4 - Malus domestica (apple) - NCBI

PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X1, mRNA. (3657 bp)

LOCUS XM_008365331 3657 bp mRNA linear PLN 07-JAN-2025 DEFINITION PREDICTED: Malus domestica protein argonaute 4-like (LOC103427265), transcript variant X1, mRNA. ACCESSION XM_008365331 VERSION XM_008365331.4 DBLINK BioProject: PRJNA1194184 KEYWORDS RefSeq. SOURCE Malus domestica (apple) ORGANISM Malus domestica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis...

Synonym: AGO4.1; argonaute
XM_008365331.4 - Malus domestica (apple) - NCBI

Sus scrofa argonaute RISC catalytic component 2 (AGO2), mRNA. (2583 bp)

misc_feature 277..501 /gene="AGO2" /gene_synonym="EIF2C2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 529..681 /gene="AGO2" /gene_synonym="EIF2C2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 682..1044 /gene="AGO2" /gene_synonym="EIF2C2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...

Synonym: EIF2C2
NM_001194975.1 - Sus scrofa (pig) - NCBI

PREDICTED: Bemisia tabaci Argonaute 2 (AGO2), mRNA. (3505 bp)

Data-END## FEATURES Location/Qualifiers source 1..3505 /organism="Bemisia tabaci" /mol_type="mRNA" /db_xref="taxon:7038" /chromosome="3" gene 1..3505 /gene="AGO2" /note="Argonaute 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins" /db_xref="GeneID:109033070" CDS 778..3279 /gene="AGO2" /codon_start=1 /product="protein argonaute-2" /protein_id="XP_072154938.1" /db_xref="GeneID:109033070" /translation="...

XM_072298837.1 - Bemisia tabaci - NCBI

PREDICTED: Diadema setosum protein argonaute-2-like (LOC140240018), mRNA. (3650 bp)

misc_feature 319..711 /gene="LOC140240018" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 739..888 /gene="LOC140240018" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 895..1254 /gene="LOC140240018" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_072319829.1 - Diadema setosum - NCBI

PREDICTED: Engystomops pustulosus protein argonaute-1 (LOC140118661), mRNA. (13195 bp)

misc_feature 212..604 /gene="LOC140118661" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 632..784 /gene="LOC140118661" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 785..1147 /gene="LOC140118661" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_072136837.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Leuresthes tenuis argonaute RISC catalytic component 2 (ago2), mRNA. (3561 bp)

misc_feature 525..749 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 777..929 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 930..1292 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072370704.1 - Leuresthes tenuis (California grunion) - NCBI

PREDICTED: Leuresthes tenuis argonaute RISC catalytic component 3b (ago3b), mRNA. (4217 bp)

misc_feature 589..873 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 901..1056 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1057..1419 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_072370261.1 - Leuresthes tenuis (California grunion) - NCBI

PREDICTED: Monopterus albus argonaute RISC component 4 (ago4), mRNA. (3372 bp)

misc_feature 356..745 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 776..928 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 929..1291 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_020597641.1 - Monopterus albus (swamp eel) - NCBI

PREDICTED: Bemisia tabaci protein argonaute-1 (AGO1), transcript variant X2, mRNA. (6480 bp)

misc_feature 1048..1437 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1465..1617 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1618..1983 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_072300853.1 - Bemisia tabaci - NCBI

PREDICTED: Manis javanica argonaute RISC component 4 (AGO4), transcript variant X3, mRNA. (6416 bp)

misc_feature 341..730 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 761..913 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 914..1276 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_037021282.2 - Manis javanica (Malayan pangolin) - NCBI

PREDICTED: Engystomops pustulosus protein argonaute-3 (LOC140118656), transcript variant X4, mRNA. (10864 bp)

misc_feature 1110..1394 /gene="LOC140118656" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1422..1574 /gene="LOC140118656" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1575..1937 /gene="LOC140118656" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_072136834.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Engystomops pustulosus protein argonaute-3 (LOC140118656), transcript variant X3, mRNA. (10868 bp)

misc_feature 1111..1395 /gene="LOC140118656" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1423..1575 /gene="LOC140118656" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1576..1938 /gene="LOC140118656" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_072136833.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Denticeps clupeoides argonaute RISC component 1 (ago1), transcript variant X4, mRNA. (2836 bp)

misc_feature 452..844 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 872..1024 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1025..1402 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_028975413.1 - Denticeps clupeoides (denticle herring) - NCBI

PREDICTED: Bemisia tabaci protein argonaute-1 (AGO1), transcript variant X3, mRNA. (5918 bp)

misc_feature 486..875 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 903..1055 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1056..1421 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_019043494.2 - Bemisia tabaci - NCBI

PREDICTED: Denticeps clupeoides argonaute RISC catalytic component 2 (ago2), mRNA. (3736 bp)

misc_feature 429..653 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 681..833 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 834..1196 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_028963480.1 - Denticeps clupeoides (denticle herring) - NCBI

PREDICTED: Mobula birostris argonaute RISC catalytic component 2 (ago2), mRNA. (9230 bp)

misc_feature 337..729 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 757..909 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 910..1272 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072259372.1 - Mobula birostris (giant manta) - NCBI

PREDICTED: Lepeophtheirus salmonis protein argonaute-2 (AGO1), mRNA. (3010 bp)

misc_feature 578..802 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 830..982 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 983..1345 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_040710363.2 - Lepeophtheirus salmonis (salmon louse) - NCBI

PREDICTED: Engystomops pustulosus argonaute RISC catalytic component 2 (AGO2), transcript variant X4, mRNA. (13593 bp)

misc_feature 595..819 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 847..999 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1000..1362 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072151132.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Engystomops pustulosus argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (13596 bp)

misc_feature 595..822 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 850..1002 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1003..1365 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072151131.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Engystomops pustulosus argonaute RISC catalytic component 2 (AGO2), transcript variant X2, mRNA. (13621 bp)

misc_feature 596..820 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 848..1000 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1001..1363 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072151130.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Engystomops pustulosus argonaute RISC catalytic component 2 (AGO2), transcript variant X1, mRNA. (13624 bp)

misc_feature 596..823 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 851..1003 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1004..1366 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072151129.1 - Engystomops pustulosus (Tungara frog) - NCBI

PREDICTED: Antedon mediterranea protein argonaute-2-like (LOC140061172), mRNA. (9134 bp)

misc_feature 496..747 /gene="LOC140061172" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 775..927 /gene="LOC140061172" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 928..1290 /gene="LOC140061172" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_072107696.1 - Antedon mediterranea - NCBI

PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X4, mRNA. (7397 bp)

misc_feature 302..694 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 722..874 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 875..1237 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_017660998.3 - Manis javanica (Malayan pangolin) - NCBI

PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X3, mRNA. (7407 bp)

misc_feature 303..695 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 723..875 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 876..1238 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_017660997.3 - Manis javanica (Malayan pangolin) - NCBI

PREDICTED: Denticeps clupeoides argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (2769 bp)

misc_feature 241..630 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 661..813 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 814..1176 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_028963589.1 - Denticeps clupeoides (denticle herring) - NCBI

PREDICTED: Monopterus albus argonaute RISC component 1 (ago1), mRNA. (6886 bp)

misc_feature 352..744 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 772..924 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 925..1287 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_020590149.1 - Monopterus albus (swamp eel) - NCBI

PREDICTED: Bemisia tabaci protein argonaute-1 (AGO1), transcript variant X1, mRNA. (6427 bp)

misc_feature 995..1384 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1412..1564 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1565..1930 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_019043485.2 - Bemisia tabaci - NCBI

PREDICTED: Manis javanica argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (6545 bp)

XM_037021280.2 - Manis javanica (Malayan pangolin) - NCBI

PREDICTED: Antedon mediterranea protein argonaute-2-like (LOC140054345), transcript variant X3, mRNA. (7329 bp)

misc_feature 294..686 /gene="LOC140054345" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 714..866 /gene="LOC140054345" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 867..1226 /gene="LOC140054345" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_072099319.1 - Antedon mediterranea - NCBI

PREDICTED: Denticeps clupeoides argonaute RISC component 4 (ago4), transcript variant X1, mRNA. (2802 bp)

XM_028963588.1 - Denticeps clupeoides (denticle herring) - NCBI

PREDICTED: Leuresthes tenuis argonaute RISC component 4 (ago4), transcript variant X3, mRNA. (5557 bp)

misc_feature 263..652 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 683..835 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 836..1198 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_072371190.1 - Leuresthes tenuis (California grunion) - NCBI

PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X1, mRNA. (7456 bp)

misc_feature 304..696 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 724..876 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 877..1239 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_017660994.3 - Manis javanica (Malayan pangolin) - NCBI

PREDICTED: Leuresthes tenuis argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (5575 bp)

XM_072371189.1 - Leuresthes tenuis (California grunion) - NCBI

PREDICTED: Carassius auratus protein argonaute-1 (LOC113059449), transcript variant X3, mRNA. (3804 bp)

misc_feature 377..601 /gene="LOC113059449" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 629..781 /gene="LOC113059449" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 782..1144 /gene="LOC113059449" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_026227975.1 - Carassius auratus (goldfish) - NCBI

PREDICTED: Leuresthes tenuis argonaute RISC component 4 (ago4), transcript variant X1, mRNA. (5590 bp)

XM_072371188.1 - Leuresthes tenuis (California grunion) - NCBI

PREDICTED: Diadema setosum protein argonaute-2-like (LOC140239984), mRNA. (4257 bp)

misc_feature 221 /gene="LOC140239984" /note="Atrophin-1 family; Region: Atrophin-1; pfam03154" /db_xref="CDD:460830" misc_feature 354..746 /gene="LOC140239984" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 774..923 /gene="LOC140239984" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 927..1289 /gene="LOC140239984" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...

XM_072319792.1 - Diadema setosum - NCBI

PREDICTED: Dermacentor andersoni protein argonaute-1 (AGO1), mRNA. (15033 bp)

misc_feature 378..767 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 795..947 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 948..1310 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_050172396.3 - Dermacentor andersoni - NCBI

PREDICTED: Antedon mediterranea protein argonaute-2-like (LOC140054345), transcript variant X2, mRNA. (7359 bp)

misc_feature 354..746 /gene="LOC140054345" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 774..926 /gene="LOC140054345" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 927..1286 /gene="LOC140054345" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_072099310.1 - Antedon mediterranea - NCBI

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Debug Info:

0.000 | 0.000 | search_start;
0.093 | 0.093 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.207 | 0.115 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.214 | 0.006 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

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