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2024-11-23 12:01:19, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Oryza sativa Japonica Group protein argonaute 3-like (LOC4336992), mRNA. (3356 bp)
misc_feature 545..739 /gene="LOC4336992" /gene_synonym="AGO3; OsAGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 773..916 /gene="LOC4336992" /gene_synonym="AGO3; OsAGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 917..1249 /gene="LOC4336992" /gene_synonym="AGO3; OsAGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named...
Synonym: AGO3; OsAGO3
NM_001419866.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 18-like (LOC4343201), mRNA. (3833 bp)
gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /note="protein argonaute 18-like" /db_xref="GeneID:4343201" exon 1..1164 /gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /inference="alignment:Splign:2.1.0" misc_feature 211..213 /gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /note="upstream in-frame stop codon" CDS 298..3564 /gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /note="putative leaf development protein Argonaute; P0675B10.105; LOC_Os07g28850" /codon_start=1 /product="protein argonaute 18" /protein_id="NP...
Synonym: AGO18; OJ1103_E04.115; OsAGO18
NM_001422151.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 17-like (LOC4328436), transcript variant X1, mRNA. (2991 bp)
misc_feature 797..1078 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature 1211..2566 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component...
Synonym: AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545
XM_015768524.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 11-like (LOC4333733), mRNA. (3109 bp)
misc_feature 651..881 /gene="LOC4333733" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 924..1058 /gene="LOC4333733" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1059..1412 /gene="LOC4333733" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_...
XM_066308808.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC107280339), mRNA. (1527 bp)
LOCUS XM_066308636 1527 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC107280339), mRNA. ACCESSION XM_066308636 VERSION XM_066308636.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational...
XM_066308636.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 2-like (LOC4336991), mRNA. (3478 bp)
gene="LOC4336991" /gene_synonym="AGO2; OsAGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1120..1263 /gene="LOC4336991" /gene_synonym="AGO2; OsAGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_...AUTHORS Wang,Z., Chen,D., Sun,F., Guo,W., Wang,W., Li,X., Lan,Y., Du,L., Li,S., Fan,Y., Zhou,Y., Zhao,H. and Zhou,T. TITLE ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection by epigenetically regulating HEXOKINASE 1 expression JOURNAL Mol Plant...
Synonym: AGO2; OsAGO2
NM_001419865.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 3 (LOC107275377), mRNA. (870 bp)
LOCUS XM_015763819 870 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 3 (LOC107275377), mRNA. ACCESSION XM_015763819 VERSION XM_015763819.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq; includes ab initio. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated...
XM_015763819.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X2, mRNA. (2378 bp)
LOCUS XM_026023845 2378 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X2, mRNA. ACCESSION XM_026023845 VERSION XM_026023845.2 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026023845.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC9269807), mRNA. (1303 bp)
PROTEIN: protein argonaute MEL1-like" /protein_id="XP_025878487.2" /db_xref="GeneID:9269807" /translation="MIKTCNFLGMDFKEWPLVPLWSINDLNIAAALKSIHSTAKEQLQLLIVILPEERGNYGKIKRVCETKLGLVSQCCLPKNVKTDTNIKYLENIALKINVKVGGQNTVLQQAFVHNGIPFVSDIPTIIFGADVSHPPPGMYSSSIAGVVGSIDWPEVTTYRXLISAQLERQEIIGGLFHSTRDPKGCLKPDGMIRELMMNFYQRNRRKPERIIFYRDGISESQFSQVIIHEVDAIRKACLSLQEDYLPPITLVIVQKRHHTRIFPHTLCSNYTEQVAQIPSGTVIDQDICHPSGFDFYLCSHTSQGNSRPTHYTVIFDENHFTADGLQLLTHNLCYMYARCTRAVSIVPPLYYAHLAAARGRSYLGKFGDGSSIRNEVSSELPEFLKVPKIADRVLGVMFYC" misc_feature 1..1089 /gene="LOC9269807" /note="PIWI domain, Argonaute-like subfamily....
XM_026022702.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 17-like (LOC4328436), mRNA. (3003 bp)
LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /note="protein argonaute 17-like" /db_xref="GeneID:4328436" exon 1..142 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /inference="alignment:Splign:2.1.0" exon 143..390 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /inference="alignment:Splign:2.1.0" CDS 178..2808 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /note="putative leaf development protein Argonaute; P0669G09.26; LOC_Os02g07310" /codon_start=1 /product="protein argonaute 17" /...
Synonym: AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545
NM_001409344.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 15 (LOC4324436), mRNA. (3066 bp)
LOCUS XM_066307488 3066 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 15 (LOC4324436), mRNA. ACCESSION XM_066307488 VERSION XM_066307488.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq; includes ab initio. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated...
XM_066307488.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 13-like (LOC4334374), mRNA. (4134 bp)
misc_feature 609..953 /gene="LOC4334374" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(756..758,801..803,834..836,846..848,900..902, 921..923,927..929) /gene="LOC4334374" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1089..2435 /gene="...
XM_015775890.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 12 (LOC107275269), mRNA. (3519 bp)
LOCUS XM_066308238 3519 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 12 (LOC107275269), mRNA. ACCESSION XM_066308238 VERSION XM_066308238.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational...
XM_066308238.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 7-like (LOC4333232), mRNA. (3860 bp)
Swiss-Prot (Q75HC2.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1132..1398 /gene="LOC4333232" /gene_synonym="AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1429..1578 /gene="LOC4333232" /gene_synonym="AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1615..1983 /gene="LOC4333232" /gene_synonym="AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4" /note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD...
Synonym: AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4
NM_001418339.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), mRNA. (900 bp)
LOCUS XM_015777723 900 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), mRNA. ACCESSION XM_015777723 VERSION XM_015777723.3 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational...
XM_015777723.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1D-like (LOC4342138), transcript variant X1, mRNA. (3633 bp)
LOCUS XM_066311193 3633 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1D-like (LOC4342138), transcript variant X1, mRNA. ACCESSION XM_066311193 VERSION XM_066311193.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
Synonym: AGO1D; OsAGO1d
XM_066311193.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), transcript variant X1, mRNA. (3053 bp)
LOCUS XM_015765588 3053 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), transcript variant X1, mRNA. ACCESSION XM_015765588 VERSION XM_015765588.3 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
Synonym: AGO4A; OsAGO4a
XM_015765588.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), transcript variant X1, mRNA. (3411 bp)
LOCUS XM_015788316 3411 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), transcript variant X1, mRNA. ACCESSION XM_015788316 VERSION XM_015788316.3 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
Synonym: OsPNH1; PHN1
XM_015788316.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), transcript variant X1, mRNA. (3462 bp)
LOCUS XM_066307062 3462 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), transcript variant X1, mRNA. ACCESSION XM_066307062 VERSION XM_066307062.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
Synonym: AGO1; AGO1C; OJ1149_C12.13; OsAGO1; OsAGO1c; OsJ_08998
XM_066307062.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X2, mRNA. (3871 bp)
LOCUS XM_015770612 3871 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X2, mRNA. ACCESSION XM_015770612 VERSION XM_015770612.3 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
Synonym: AGO1A; OJ1493_H11.13; OsAGO1a
XM_015770612.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X1, mRNA. (3857 bp)
LOCUS XM_015770611 3857 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X1, mRNA. ACCESSION XM_015770611 VERSION XM_015770611.3 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
Synonym: AGO1A; OJ1493_H11.13; OsAGO1a
XM_015770611.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X1, mRNA. (2366 bp)
LOCUS XM_026023844 2366 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X1, mRNA. ACCESSION XM_026023844 VERSION XM_026023844.2 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026023844.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute MEL1-like (LOC4334449), mRNA. (3476 bp)
Oryza sativa Japonica Group" /mol_type="mRNA" /db_xref="taxon:39947" /chromosome="3" /map="3" gene 1..3476 /gene="LOC4334449" /gene_synonym="MEAL1; MEL1; OsMEL1" /note="protein argonaute MEL1-like" /db_xref="GeneID:4334449" exon 1..767 /gene="LOC4334449" /gene_synonym="MEAL1; MEL1; OsMEL1" /inference="alignment:Splign:2.1.0" CDS 72..3248 /gene="LOC4334449" /gene_synonym="MEAL1; MEL1; OsMEL1" /note="ARGONAUTE family protein; LOC_Os03g58600; OSJNBa0052F07.11; Protein MEIOSIS ARRESTED AT LEPTOTENE 1" /codon_start=1 /product="protein argonaute MEL1" /protein_id="NP_001405763.1" /db_xref="GeneID...
Synonym: MEAL1; MEL1; OsMEL1
NM_001418834.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 16-like (LOC4342886), mRNA. (3307 bp)
LOCUS XM_015792104 3307 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 16-like (LOC4342886), mRNA. ACCESSION XM_015792104 VERSION XM_015792104.3 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq; corrected model. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated...
XM_015792104.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 14-like (LOC4342603), mRNA. (3539 bp)
Japonica Group" /mol_type="mRNA" /db_xref="taxon:39947" /chromosome="7" /map="7" gene 1..3539 /gene="LOC4342603" /gene_synonym="AGO14; OsAGO14" /note="protein argonaute 14-like" /db_xref="GeneID:4342603" exon 1..764 /gene="LOC4342603" /gene_synonym="AGO14; OsAGO14" /inference="alignment:Splign:2.1.0" CDS 87..3245 /gene="LOC4342603" /gene_synonym="AGO14; OsAGO14" /note="OSJNBb0002L09.2; putative leaf development protein Argonaute; OSJNBb0084L07.14; LOC_Os07g09020" /codon_start=1 /product="protein argonaute 14" /protein_id="NP_001408940.1" /db_xref="GeneID:4342603" /translation="...
Synonym: AGO14; OsAGO14
NM_001422011.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 2, mRNA. (3845 bp)
LOCUS NM_001404898 3845 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 2, mRNA. ACCESSION NM_001404898 XM_015780806 VERSION NM_001404898.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or...
Synonym: AGO1B; OsAGO1b
NM_001404898.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 1, mRNA. (3812 bp)
LOCUS NM_001404897 3812 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 1, mRNA. ACCESSION NM_001404897 XM_015780805 VERSION NM_001404897.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or...
Synonym: AGO1B; OsAGO1b
NM_001404897.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), mRNA. (3683 bp)
LOCUS NM_001424295 3683 bp mRNA linear PLN 14-JUN-2024 DEFINITION Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), mRNA. ACCESSION NM_001424295 XM_015788315 VERSION NM_001424295.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: OsPNH1; PHN1
NM_001424295.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), mRNA. (3852 bp)
LOCUS NM_001416817 3852 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), mRNA. ACCESSION NM_001416817 XM_015770610 VERSION NM_001416817.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO1A; OJ1493_H11.13; OsAGO1a
NM_001416817.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1D-like (LOC4342138), mRNA. (3757 bp)
LOCUS NM_001402967 3757 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 1D-like (LOC4342138), mRNA. ACCESSION NM_001402967 XM_015787025 VERSION NM_001402967.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO1D; OsAGO1d
NM_001402967.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), mRNA. (3638 bp)
LOCUS NM_001423879 3638 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), mRNA. ACCESSION NM_001423879 XM_015770982 VERSION NM_001423879.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO1; AGO1C; OJ1149_C12.13; OsAGO1; OsAGO1c; OsJ_08998
NM_001423879.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), mRNA. (3073 bp)
LOCUS NM_001428109 3073 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), mRNA. ACCESSION NM_001428109 XM_015765587 VERSION NM_001428109.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO4A; OsAGO4a
NM_001428109.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 4B-like (LOC4335025), mRNA. (3374 bp)
LOCUS NM_001419070 3374 bp mRNA linear PLN 15-JUL-2024 DEFINITION Oryza sativa Japonica Group protein argonaute 4B-like (LOC4335025), mRNA. ACCESSION NM_001419070 XM_015781187 VERSION NM_001419070.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO4B; OsAGO4b; OsJ_13701
NM_001419070.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized protein (LOC4332859), mRNA. (2901 bp)
misc_feature 118..>792 /gene="LOC4332859" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 148..375 /gene="LOC4332859" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" polyA_site 2901 /gene="LOC4332859" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN //...
XM_015773900.3 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group hexokinase-1-like (LOC4343113), mRNA. (1650 bp)
from UniProtKB/Swiss-Prot (Q8LH82.1); Region: Hexokinase large subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01084" ORIGIN // REFERENCE 1 (bases 1 to 1650) AUTHORS Wang,Z., Chen,D., Sun,F., Guo,W., Wang,W., Li,X., Lan,Y., Du,L., Li,S., Fan,Y., Zhou,Y., Zhao,H. and Zhou,T. TITLE ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection by epigenetically regulating HEXOKINASE 1 expression JOURNAL Mol Plant Pathol 22 (9), 1029-1040 (2021) PUBMED 34110094 REMARK GeneRIF: ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection by...
Synonym: HXK1
NM_001422125.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/os/Argonaute
lang : en | div : | spe : os | query_string : Argonaute | format : html | download : 

0.000 | 0.000 | search_start;
0.340 | 0.340 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Oryza sativa Japonica Group (Japanese rice)?to=0&format=json
0.421 | 0.081 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Oryza sativa Japonica Group (Japanese rice)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.425 | 0.004 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]