LOCUS       XM_026023844            2366 bp    mRNA    linear   PLN 10-JUL-2024
DEFINITION  PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like
            (LOC112938223), transcript variant X1, mRNA.
ACCESSION   XM_026023844
VERSION     XM_026023844.2
DBLINK      BioProject: PRJNA1123306
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089037) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 10, 2024 this sequence version replaced XM_026023844.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034140825.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="3"
     gene            1..2366
                     /gene="LOC112938223"
                     /note="protein argonaute MEL1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 5 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:112938223"
     CDS             621..2237
                     /gene="LOC112938223"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_025879629.1"
                     /db_xref="GeneID:112938223"
                     /translation="

MFKGEQQNCLSDMLKEVTRVKKLLAITDNVHKLLFEAFDGWLIIQFRSYPAGTVLDSQIGLLGEIDSNINATGLQHTHDLMKKMKFAASATPHPRRVLAVALALMVAFAVGPMVALAKCEQQAHAVASLCGGTGIYARCCFALKRSLDGGDPLCLCSLANNREVAEMGLNSTRILSLYRKCEGNVFPVLPAGGCEEVPALSPSPPPLHGSVMPPPLPPATVEPVISAPMVEPPPPPAMITPLPPSTPVFTLPPPPPVTTAPSTALPAGASAAAPSTGVLRRIYQALIGLLCLVAGFLLVAVFVVVRKYWKPQLNNDVEMGSSNAADQSAIENAKKAAAEAQSSAEAAASAAAGSLATAQAASGAAQAAQAATEEVVTVQANAAEQAVLFVEALGRAAQQISTCTITLGQLLQLVSQIIQAVRAAQGGAASAAAAITGLFARFGEIFGRVGAATAFVEAQAVAAQGAPSDLIDIDCINRPGGDRGVSSFDEGGSNEDEDEANVERSTSRTSNRIRKSNVRYSEDVWVLDPPARGKGRRI"

     misc_feature    912..1163
                     /gene="LOC112938223"
                     /note="Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT)
                     and Seed Storage (SS) Protein family; a protein family
                     unique to higher plants that includes cereal-type
                     alpha-amylase inhibitors, lipid transfer proteins, seed
                     storage proteins, and similar proteins; Region: AAI_LTSS;
                     cl07890"
                     /db_xref="CDD:447555"
     polyA_site      2366
                     /gene="LOC112938223"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gccactccacccttcccttccccacccatccggcctcacctccatctcgttccctagcttcctccacatctctgccatggcctacctcggcggcgaccctggccgtggcggtggagccccgccggggatgacgccgtggccggggcctcctcctcagccgggccagccggccgtcgtctacacggcgctgcaccagggcgcgtaccagcccggggtggcgcaggtcgtgtactgggcgccctccccgggggctccttctctgggtggcatccgcgcgcctccggctccgtaccagccggcgcaggtggctgcgccacaggcggccgcgccgttcgccgctgctctggccaaggaggtcgagcagaagctgttcgtgacggagaacgcgctggggccacccgctgcggcggcggcggtctcgaagaaggggcccgcccaccctgggcgaccggggtacggcgcggccgggaagaaggtgatgatccacgagaacaacttcctccacaacgtcgtcgacaacaacctcttccacaacgatgaaatgatcaatggaggaactgaggaaccaaggttctgcggcggcctgattcagatgtgcaatgtggagaatgctctgagggatgttcaaaggagaacaacagaactgcctgtcagatatgctcaaggaagtcacaagagtgaaaaaattgttggctattactgacaatgtacataagttactatttgaagcatttgatggttggcttattattcagtttcgatcttatcctgcaggaactgttctggacagtcagattggccttcttggagaaatagattcgaacataaatgctactggcttgcagcatactcatgacttgatgaaaaagatgaagtttgcagcctcggcaactccgcatccacgccgggttctcgctgtagctctagccctcatggtggcctttgcagttggccccatggtggctctagctaagtgcgagcagcaggcccacgccgtggcttctctgtgcggtgggacaggcatatatgcaagatgctgttttgccttgaagaggtcccttgatggtggagatcctctatgcctctgttcgctcgccaacaacagggaggtggctgagatggggttgaattcaacccgaatcctttctctttatcggaaatgcgagggcaatgtgtttcctgttctacccgctggtggatgtgaagaggtccccgctttgtctccctctccgccgccgctgcatggctctgtgatgccacctccactgccaccggcgacggttgaaccggtcatttcagcaccgatggtcgagccgccgcctccgcctgccatgattacaccattgccaccatccacgccagtgtttacgctgcctccgccaccaccagttactactgcgccgagcacggccctgccagccggtgcaagtgcggcagcgccgagcacgggggtgctgagaagaatctatcaggcgctcattggtcttctatgtcttgtggctggttttctgctggtggcggtgtttgttgtggttcgcaagtattggaagcctcagttgaacaatgacgtggagatgggctcctcaaatgccgcagatcagtcagccattgagaatgccaagaaggcagcggccgaggcccaaagctccgccgaagcagctgcaagtgctgccgctgggtccctggccactgcgcaggctgcttctggagcggcgcaggcagcgcaagcagcaactgaagaggtggtgacggtacaggcaaatgcggctgaacaggcagtgctatttgtggaagcattggggcgagccgcacagcagataagtacttgcaccattacattaggccagcttctacaacttgtgtcacagattattcaggcagtgagagcagcccaaggaggcgcagcttcagccgccgcagcaattacgggcttgttcgcccgctttggggagatctttgggcgtgttggagccgctacagcatttgtggaggctcaggccgtggctgcacagggcgccccgtcagatttgattgatatcgactgcattaataggcctggaggagatagaggcgtatcctcatttgatgaaggagggtccaatgaagatgaagatgaagccaatgtagaaagaagtactagtaggactagtaataggattagaaaaagtaatgtgcgttattctgaagatgtttgggttttagatcctccagctaggggtaagggtagacgtatttgagagaatttttcagtttgaagatttctgactttgagagaatttttcagtttgaggatttttggctttttgagtaccattgagatgttgttcatatatgatctatcagatttgcagaaacaatattgcata

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