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2026-09-01 05:22:32, GGRNA : RefSeq release 233 (Jan, 2026)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Crassostrea virginica copper-transporting ATPase 1-like (LOC111122539), transcript variant X1, mRNA. (5219 bp)
alignments, including 44 samples with support for all annotated introns" /db_xref="GeneID:111122539" CDS 16..4407 /gene="LOC111122539" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X1" /protein_id="XP_022320032.2" /db_xref="GeneID:111122539" /translation="MLGEETQEMEKVTDLHIEGMTCQSCIDKIQDHMAREPGVIHVQMFLEEKEAKITYSPTETSPPILAEQISDMGFPSKVKLVHPVRGDNCQDAIINVGGMTCQSCVKSIESKMLEVSGILGITVSLLKKQAYVQFNPGKISAESIASAIDDMGFEASVHSITRDKGLTTKIGVEGMTCQSCVNSIESAMRGKPGVREIKVSLSDKEAYIVYDPTLTSPGSLRDQIDDMGFEATLARESSIESEFDRLASRQSSTRSVQSELVCQIAVKGMTCQSCVKNIESNISPKPGVMSISVSLEKEMASVTYNPLVTNPTSIAGMIDDMGF...
AA_position 20
XM_022464324.2 - Crassostrea virginica (eastern oyster) - NCBI
PREDICTED: Crassostrea virginica copper-transporting ATPase 1-like (LOC111122539), transcript variant X2, mRNA. (5214 bp)
all annotated introns" /db_xref="GeneID:111122539" CDS 107..4402 /gene="LOC111122539" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X2" /protein_id="XP_078324080.1" /db_xref="GeneID:111122539" /translation="MAGQGKYMKLPMFLEEKEAKITYSPTETSPPILAEQISDMGFPSKVKLVHPVRGDNCQDAIINVGGMTCQSCVKSIESKMLEVSGILGITVSLLKKQAYVQFNPGKISAESIASAIDDMGFEASVHSITRDKGLTTKIGVEGMTCQSCVNSIESAMRGKPGVREIKVSLSDKEAYIVYDPTLTSPGSLRDQIDDMGFEATLARESSIESEFDRLASRQSSTRSVQSELVCQIAVKGMTCQSCVKNIESNISPKPGVMSISVSLEKEMASVTYNPLVTNPTSIAGMIDDMGFEASVEGSDAEPSTDTVVVGVEGMTCHSCVKSIEEHISKNPAVKSIKVSLADQNANIEYYPNRATPSTLRDAIDDMGFTASL...
AA_position 67
XM_078467954.1 - Crassostrea virginica (eastern oyster) - NCBI
PREDICTED: Liolophura sinensis copper-transporting ATPase 1-like (LOC135474023), transcript variant X2, mRNA. (5115 bp)
method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:135474023" CDS 151..4548 /gene="LOC135474023" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X2" /protein_id="XP_064610075.1" /db_xref="GeneID:135474023" /translation="MERTTVIDVRGMTCQSCVRNIEMNISRQKGVNKIQVILENKEAVVNYNPEETSPEKIADLIDDMGFPANVKPGIRGALAGKRDNPLSEATVLIEGMTCMSCVRNIEKNISGKPGIISISVSLVNKRAEVVFDPDQTNPAEIAESIDDMGFEAKLPEGKSQRMLIAQIHVEGMTCQSCVRNIESNIADKAGVQEIRVSLSDKEAFILYDPEVTDLETLRSQIDDMGFEASLPSCDALAEEFDKLASRSSTGAAPQDESCLIGIQGMTCQSCVRNIEGHIGLKPGIKSIEVNLAGKNGKVKYDPNIIDPSAIAEAIDDMGFEAKV...
AA_position 12
XM_064754005.1 - Liolophura sinensis - NCBI
PREDICTED: Liolophura sinensis copper-transporting ATPase 1-like (LOC135474023), transcript variant X1, mRNA. (5121 bp)
method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:135474023" CDS 151..4554 /gene="LOC135474023" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X1" /protein_id="XP_064610074.1" /db_xref="GeneID:135474023" /translation="MERTTVIDVRGMTCQSCVRNIEMNISRQKGVNKIQVILENKEAVVNYNPEETSPEKIADLIDDMGFPANVKPGIRGALAGKRDNPLSEATVLIEGMTCMSCVRNIEKNISGKPGIISISVSLVNKRAEVVFDPDQTNPAEIAESIDDMGFEAKLPEGKSQRMLIAQIHVEGMTCQSCVRNIESNIADKAGVQEIRVSLSDKEAFILYDPEVTDLETLRSQIDDMGFEASLPSCDALAEEFDKLASRSSTGAAPQDESCLIGIQGMTCQSCVRNIEGHIGLKPGIKSIEVNLAGKNGKVKYDPNIIDPSAIAEAIDDMGFEAKV...
AA_position 12
XM_064754004.1 - Liolophura sinensis - NCBI
PREDICTED: Lissotriton helveticus ATPase copper transporting beta (ATP7B), transcript variant X5, mRNA. (4875 bp)
including 1 sample with support for all annotated introns" /db_xref="GeneID:144772729" CDS 280..4647 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X3" /protein_id="XP_078513391.1" /db_xref="GeneID:144772729" /translation="MKSSLAYDNIAYEGSQEHLFTPSPSTSTVMVAILGMTCQSCVECIDGRISKVNGIVNLKISLEQNNAVITYLPSEISPQKICLEIEDMGFEAKIVEGAESGSPRDVSPLTSSSGESLIKIRVKGMTCQSCVNSIESKIGKLQGVLKIKVSLSSQEAVITYQPHLIEPENLRNCIENMGFEATIKTKPDPINLGTIDVDLLQKKSFKNNPDGPQSINCNGEPGAETLNSITAITLGIEGMHCKSCVLNIEGNISHLPGIQSIKVCLKGKNAVVYFCPGIITEQSLKQAIEALPPGDFKVTLPRSVQDNLETLSSRTPFHSLSRTSVDQTQGTSSRAVITIRGMTCNSCV...
AA_position 36
XM_078657265.1 - Lissotriton helveticus (palmate newt) - NCBI
PREDICTED: Lissotriton helveticus ATPase copper transporting beta (ATP7B), transcript variant X4, mRNA. (4875 bp)
annotated introns" /db_xref="GeneID:144772729" CDS 136..4647 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X2" /protein_id="XP_078513390.1" /db_xref="GeneID:144772729" /translation="MLPRRMSKNKEKSFSAPAVPRGRTPQNASHAYQALSTTDATVYVTLLKMKSSLAYDNIAYEGSQEHLFTPSPSTSTVMVAILGMTCQSCVECIDGRISKVNGIVNLKISLEQNNAVITYLPSEISPQKICLEIEDMGFEAKIVEGAESGSPRDVSPLTSSSGESLIKIRVKGMTCQSCVNSIESKIGKLQGVLKIKVSLSSQEAVITYQPHLIEPENLRNCIENMGFEATIKTKPDPINLGTIDVDLLQKKSFKNNPDGPQSINCNGEPGAETLNSITAITLGIEGMHCKSCVLNIEGNISHLPGIQSIKVCLKGKNAVVYFCPGIITEQSLKQAIEALPPGDFKVTLPRSVQDNLETLSSRTPFHSLSRTSVDQTQGTSSRAVITIR...
AA_position 84
XM_078657264.1 - Lissotriton helveticus (palmate newt) - NCBI
PREDICTED: Lissotriton helveticus ATPase copper transporting beta (ATP7B), transcript variant X3, mRNA. (4877 bp)
annotated introns" /db_xref="GeneID:144772729" CDS 138..4649 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X2" /protein_id="XP_078513389.1" /db_xref="GeneID:144772729" /translation="MLPRRMSKNKEKSFSAPAVPRGRTPQNASHAYQALSTTDATVYVTLLKMKSSLAYDNIAYEGSQEHLFTPSPSTSTVMVAILGMTCQSCVECIDGRISKVNGIVNLKISLEQNNAVITYLPSEISPQKICLEIEDMGFEAKIVEGAESGSPRDVSPLTSSSGESLIKIRVKGMTCQSCVNSIESKIGKLQGVLKIKVSLSSQEAVITYQPHLIEPENLRNCIENMGFEATIKTKPDPINLGTIDVDLLQKKSFKNNPDGPQSINCNGEPGAETLNSITAITLGIEGMHCKSCVLNIEGNISHLPGIQSIKVCLKGKNAVVYFCPGIITEQSLKQAIEALPPGDFKVTLPRSVQDNLETLSSRTPFHSLSRTSVDQTQGTSSRAVITIR...
AA_position 84
XM_078657263.1 - Lissotriton helveticus (palmate newt) - NCBI
PREDICTED: Lissotriton helveticus ATPase copper transporting beta (ATP7B), transcript variant X2, mRNA. (4919 bp)
annotated introns" /db_xref="GeneID:144772729" CDS 180..4691 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X2" /protein_id="XP_078513388.1" /db_xref="GeneID:144772729" /translation="MLPRRMSKNKEKSFSAPAVPRGRTPQNASHAYQALSTTDATVYVTLLKMKSSLAYDNIAYEGSQEHLFTPSPSTSTVMVAILGMTCQSCVECIDGRISKVNGIVNLKISLEQNNAVITYLPSEISPQKICLEIEDMGFEAKIVEGAESGSPRDVSPLTSSSGESLIKIRVKGMTCQSCVNSIESKIGKLQGVLKIKVSLSSQEAVITYQPHLIEPENLRNCIENMGFEATIKTKPDPINLGTIDVDLLQKKSFKNNPDGPQSINCNGEPGAETLNSITAITLGIEGMHCKSCVLNIEGNISHLPGIQSIKVCLKGKNAVVYFCPGIITEQSLKQAIEALPPGDFKVTLPRSVQDNLETLSSRTPFHSLSRTSVDQTQGTSSRAVITIR...
AA_position 84
XM_078657262.1 - Lissotriton helveticus (palmate newt) - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X8, mRNA. (14029 bp)
introns" /db_xref="GeneID:143298813" CDS 163..4791 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X4" /protein_id="XP_076467914.1" /db_xref="GeneID:143298813" /translation="MALRSKKGFKRLPVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISDMGF...
AA_position 78
XM_076611799.1 - Babylonia areolata - NCBI
PREDICTED: Lissotriton helveticus ATPase copper transporting beta (ATP7B), transcript variant X1, mRNA. (5014 bp)
CDS 140..4786 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X1" /protein_id="XP_078513387.1" /db_xref="GeneID:144772729" /translation="MARIGFGAKKDGNPYTVPELRDRDVKLISFKKRQVLDEVIHLQDAAEIPPLEEAACLQAPDERLPGYPTEGAAARMEQALSTTDATVYVTLLKMKSSLAYDNIAYEGSQEHLFTPSPSTSTVMVAILGMTCQSCVECIDGRISKVNGIVNLKISLEQNNAVITYLPSEISPQKICLEIEDMGFEAKIVEGAESGSPRDVSPLTSSSGESLIKIRVKGMTCQSCVNSIESKIGKLQGVLKIKVSLSSQEAVITYQPHLIEPENLRNCIENMGFEATIKTKPDPINLGTIDVDLLQKKSFKNNPDGPQSINCNGEPGAETLNSITAITLGIEGMHCKSCVLNIEGNISHLPGIQSIKVCLKGKNAVVYFCPGIITEQSLKQAIEALPPGDFKVTLPRSVQDNLETLSSRTPFHSLSRTSVDQTQGTSSRAVITIRGM...
AA_position 129
XM_078657261.1 - Lissotriton helveticus (palmate newt) - NCBI
PREDICTED: Lampetra planeri copper-transporting ATPase 2-like (LOC144736269), transcript variant X2, mRNA. (7408 bp)
samples with support for all annotated introns" /db_xref="GeneID:144736269" CDS 713..5278 /gene="LOC144736269" /codon_start=1 /product="copper-transporting ATPase 2-like isoform X1" /protein_id="XP_078475019.1" /db_xref="GeneID:144736269" /translation="MAEEEVKAGAEVKVDVEVKADMEVWHSTFTVEGMTCQSCVQSITKVLADLPGIYSVQVSLENKSASVLYDPALHTLNSLKDSIEDIGFEAAHRGAATVMMLEVADVDIVGMTCQSCVQSIEGKMSKLKGVLSFSVCLQKNNATAAFIPEVISMQKLCDEIEDMGFEARPVDRKPATDTAEEGRSTAEDMVKMRLEGLIGQSAVNAVEGKLSKLNGVLRVKVNLSSQEVVVWFQKLVISVDDIQNQIAECGLQTTVRSRPKQLRLSPQAVQKLQEMNGSVCHFKEAKPTSLGLGKCPNVAISVEGMHCKSCVFNIESNIGQLPGVHSIVVSLETKSAAVIYSPEDISP...
AA_position 34
XM_078618893.1 - Lampetra planeri (European brook lamprey) - NCBI
PREDICTED: Lampetra planeri copper-transporting ATPase 2-like (LOC144736269), transcript variant X1, mRNA. (7935 bp)
samples with support for all annotated introns" /db_xref="GeneID:144736269" CDS 1240..5805 /gene="LOC144736269" /codon_start=1 /product="copper-transporting ATPase 2-like isoform X1" /protein_id="XP_078475018.1" /db_xref="GeneID:144736269" /translation="MAEEEVKAGAEVKVDVEVKADMEVWHSTFTVEGMTCQSCVQSITKVLADLPGIYSVQVSLENKSASVLYDPALHTLNSLKDSIEDIGFEAAHRGAATVMMLEVADVDIVGMTCQSCVQSIEGKMSKLKGVLSFSVCLQKNNATAAFIPEVISMQKLCDEIEDMGFEARPVDRKPATDTAEEGRSTAEDMVKMRLEGLIGQSAVNAVEGKLSKLNGVLRVKVNLSSQEVVVWFQKLVISVDDIQNQIAECGLQTTVRSRPKQLRLSPQAVQKLQEMNGSVCHFKEAKPTSLGLGKCPNVAISVEGMHCKSCVFNIESNIGQLPGVHSIVVSLETKSAAVIYSPEDIS...
AA_position 34
XM_078618892.1 - Lampetra planeri (European brook lamprey) - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X7, mRNA. (7460 bp)
CDS 144..4826 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X3" /protein_id="XP_076467913.1" /db_xref="GeneID:143298813" /translation="MVVCLKEMEREAVLRLGKPPSEEEAQTIHRLLTAQTGVVDVKVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISDMGFTASVAEGG...
AA_position 107
XM_076611798.1 - Babylonia areolata - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X6, mRNA. (11865 bp)
CDS 144..4826 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X3" /protein_id="XP_076467912.1" /db_xref="GeneID:143298813" /translation="MVVCLKEMEREAVLRLGKPPSEEEAQTIHRLLTAQTGVVDVKVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISDMGFTASVAEGG...
AA_position 107
XM_076611797.1 - Babylonia areolata - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X5, mRNA. (13967 bp)
GeneID:143298813" CDS 35..4729 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X2" /protein_id="XP_076467911.1" /db_xref="GeneID:143298813" /translation="MEREAVLRLGKPPSEEEAQTIHRLLTAQTGVVDVKVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISDM...
AA_position 100
XM_076611796.1 - Babylonia areolata - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X3, mRNA. (14080 bp)
GeneID:143298813" CDS 148..4842 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X2" /protein_id="XP_076467909.1" /db_xref="GeneID:143298813" /translation="MEREAVLRLGKPPSEEEAQTIHRLLTAQTGVVDVKVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISD...
AA_position 100
XM_076611794.1 - Babylonia areolata - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X4, mRNA. (14119 bp)
GeneID:143298813" CDS 187..4881 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X2" /protein_id="XP_076467910.1" /db_xref="GeneID:143298813" /translation="MEREAVLRLGKPPSEEEAQTIHRLLTAQTGVVDVKVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISD...
AA_position 100
XM_076611795.1 - Babylonia areolata - NCBI
PREDICTED: Babylonia areolata copper-transporting ATPase 1-like (LOC143298813), transcript variant X1, mRNA. (14097 bp)
CDS 144..4859 /gene="LOC143298813" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X1" /protein_id="XP_076467907.1" /db_xref="GeneID:143298813" /translation="MVVCLKEMEREAVLRLGKPPSEEEAQTIHRLLTAQTGVVDVKVQYEVVDAHVTYRPTETNPPYLLEKMEELGMKATIMDIHTSPSHSSTGAGGGDGTEKVGIIVEGMTCQSCVRNIESNISRMDGVQHIAVSLEDKLAVAIIRPGQTSANAVAEGISNMGFDARVATNGVNRHCVVSVQGMTCNSCVRNIESNVGGKPGVVAIKVSLADNNAVVTYNPKVLSAVEVAEMIDDMGFDAEVAEEDTDSIHDREFDALAERNASGNVHKSCEVSVKGMTCNSCVQNIQSNIGGKPGVVSIKVSLADSNAVVTYDPAVTSPGQVAGMVDDMGFDAAVVLQDFASGDSPSPSPALFQKCTISIEGMTCQSCVRTIETAMGVEPGVQSISVSLDDRSGEVTFDSSLLTPAKIAQMISDMGFTASVAEGG...
AA_position 107
XM_076611792.1 - Babylonia areolata - NCBI
PREDICTED: Anticarsia gemmatalis copper-transporting ATPase 1 (ATP7), transcript variant X4, mRNA. (6866 bp)
alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:142984878" CDS 238..3891 /gene="ATP7" /codon_start=1 /product="copper-transporting ATPase 1 isoform X3" /protein_id="XP_075988857.1" /db_xref="GeneID:142984878" /translation="MMSRGIKYQRLDDLDIGEPSQDLVAVRVPINGMTCQSCVRSIEGSVRELPGIQYVKVELSEHAGYFRYDPHAITVEAIRAHIHDMGFDVPDNADHETRHLLPKEIPTELLIDMSGTGEAEDMDVLINVIGMTCQSCVNTIEGALREMAGVIQATVTLSEALLRVKCTRGAVSPAQLCDAVYELGFEPTLISVDNERYIEGSPQSKSEEGSGDGIKPPSPVKSRTQANGTASPIPESETARCTLEVRGMTCASCVAAIEKHCAKLYGVHSILVALLAAKAEVRYEPRKISAQDVAHSITELGFPSSVISDCDGSGQKDVVVMIKGMTCASCVNKIEK...
AA_position 33
XM_076132742.1 - Anticarsia gemmatalis (velvetbean caterpillar) - NCBI
PREDICTED: Temnothorax americanus copper-transporting ATPase 1 (Atp7), transcript variant X2, mRNA. (5298 bp)
for all annotated introns" /db_xref="GeneID:143902033" CDS 443..4333 /gene="Atp7" /codon_start=1 /product="copper-transporting ATPase 1 isoform X2" /protein_id="XP_077270858.1" /db_xref="GeneID:143902033" /translation="MEAAKVMEPQNGADPSRAQRDEEKGSDGRGVKPKRRKSDGDDPDSKGITHLVRALRTSEAWQLAQETSTVKIGIEGMTCQSCANNIERVIGNRPDVVGIKVVLEEKAGYIEYKTHEITPRELAEAIEDMGYTASLPSNLTSGNAENKANNSSIPATGTCNIHVDGMTCQSCVKNITDVLSEKPGIKNVNVSLEDKEAKVSYSSGDVTVDQIVMYIEDMGFTAYVKIAKDETSQLDADINTELVLQANGAGDVKKQLSKCFLRITGMTHAHHVTGIEKHCKKLYGVNSILVALMAAKAEVTYNPDKIKAADIASCISELGFPTTLIEEFGTEEVEVELKIMGMTCASCVNKIESTVKKLPGVRSAMVALATQRGKFKYDVEM...
AA_position 77
XM_077414732.1 - Temnothorax americanus - NCBI
PREDICTED: Anticarsia gemmatalis copper-transporting ATPase 1 (ATP7), transcript variant X1, mRNA. (6822 bp)
including 12 samples with support for all annotated introns" /db_xref="GeneID:142984878" CDS 238..3957 /gene="ATP7" /codon_start=1 /product="copper-transporting ATPase 1 isoform X1" /protein_id="XP_075988854.1" /db_xref="GeneID:142984878" /translation="MMSRGIKYQRLDDLDIGEPSQDLVAVRVPINGMTCQSCVRSIEGSVRELPGIQYVKVELSEHAGYFRYDPHAITVEAIRAHIHDMGFDVPDNADHETRHLLPKEIPTELLIDMSGTGEAEDMDVLINVIGMTCQSCVNTIEGALREMAGVIQATVTLSEALLRVKCTRGAVSPAQLCDAVYELGFEPTLISVDNERYIEGSPQSKSEEGSGDGIKPPSPVKSRTQANGTASPIPESETARCTLEVRGMTCASCVAAIEKHCAKLYGVHSILVALLAAKAEVRYEPRKISAQDVAHSITELGFPSSVISDCDGSGQKDVVVMIKGMTCASCVNKIEKSVLKLTGVVSC...
AA_position 33
XM_076132739.1 - Anticarsia gemmatalis (velvetbean caterpillar) - NCBI
PREDICTED: Temnothorax americanus copper-transporting ATPase 1 (Atp7), transcript variant X1, mRNA. (5644 bp)
all annotated introns" /db_xref="GeneID:143902033" CDS 777..4679 /gene="Atp7" /codon_start=1 /product="copper-transporting ATPase 1 isoform X1" /protein_id="XP_077270857.1" /db_xref="GeneID:143902033" /translation="MVKFRGPLVHRVKLAYRNLKDMTMTNEVEHSISCENIRLLDGDGDDPDSKGITHLVRALRTSEAWQLAQETSTVKIGIEGMTCQSCANNIERVIGNRPDVVGIKVVLEEKAGYIEYKTHEITPRELAEAIEDMGYTASLPSNLTSGNAENKANNSSIPATGTCNIHVDGMTCQSCVKNITDVLSEKPGIKNVNVSLEDKEAKVSYSSGDVTVDQIVMYIEDMGFTAYVKIAKDETSQLDADINTELVLQANGAGDVKKQLSKCFLRITGMTHAHHVTGIEKHCKKLYGVNSILVALMAAKAEVTYNPDKIKAADIASCISELGFPTTLIEEFGTEEVEVELKIMGMTCASCVNKIESTVKKLPGVRSAMVALATQRGKFKYDVEM...
AA_position 81
XM_077414731.1 - Temnothorax americanus - NCBI
PREDICTED: Anticarsia gemmatalis copper-transporting ATPase 1 (ATP7), transcript variant X3, mRNA. (6921 bp)
alignments, including 12 samples with support for all annotated introns" /db_xref="GeneID:142984878" CDS 340..4056 /gene="ATP7" /codon_start=1 /product="copper-transporting ATPase 1 isoform X2" /protein_id="XP_075988856.1" /db_xref="GeneID:142984878" /translation="MASICENTELVEKVPAEPSQDLVAVRVPINGMTCQSCVRSIEGSVRELPGIQYVKVELSEHAGYFRYDPHAITVEAIRAHIHDMGFDVPDNADHETRHLLPKEIPTELLIDMSGTGEAEDMDVLINVIGMTCQSCVNTIEGALREMAGVIQATVTLSEALLRVKCTRGAVSPAQLCDAVYELGFEPTLISVDNERYIEGSPQSKSEEGSGDGIKPPSPVKSRTQANGTASPIPESETARCTLEVRGMTCASCVAAIEKHCAKLYGVHSILVALLAAKAEVRYEPRKISAQDVAHSITELGFPSSVISDCDGSGQKDVVVMIKGMTCASCVNKIEK...
AA_position 32
XM_076132741.1 - Anticarsia gemmatalis (velvetbean caterpillar) - NCBI
PREDICTED: Anticarsia gemmatalis copper-transporting ATPase 1 (ATP7), transcript variant X2, mRNA. (7003 bp)
alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:142984878" CDS 419..4138 /gene="ATP7" /codon_start=1 /product="copper-transporting ATPase 1 isoform X1" /protein_id="XP_075988855.1" /db_xref="GeneID:142984878" /translation="MMSRGIKYQRLDDLDIGEPSQDLVAVRVPINGMTCQSCVRSIEGSVRELPGIQYVKVELSEHAGYFRYDPHAITVEAIRAHIHDMGFDVPDNADHETRHLLPKEIPTELLIDMSGTGEAEDMDVLINVIGMTCQSCVNTIEGALREMAGVIQATVTLSEALLRVKCTRGAVSPAQLCDAVYELGFEPTLISVDNERYIEGSPQSKSEEGSGDGIKPPSPVKSRTQANGTASPIPESETARCTLEVRGMTCASCVAAIEKHCAKLYGVHSILVALLAAKAEVRYEPRKISAQDVAHSITELGFPSSVISDCDGSGQKDVVVMIKGMTCASCVNKIEK...
AA_position 33
XM_076132740.1 - Anticarsia gemmatalis (velvetbean caterpillar) - NCBI
PREDICTED: Limulus polyphemus copper-transporting ATPase 2-like (LOC106469561), transcript variant X1, mRNA. (3113 bp)
by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:106469561" CDS 357..2831 /gene="LOC106469561" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_022253809.1" /db_xref="GeneID:106469561" /translation="MAEHATSIVAIEGMTCQSCVSTIEKNISSVPGVKSIKVYLGRKKAEITFDSRVVTIKELAAQIEDMGFEACPEDSIVSLPTLQDVTLRVQGMTCESCVRNIERRVSSQAGVHTVKVSLQEELARIAYNINETNPQTLLNIINEMGFTATVSPENTKSTKLQESSRNYSSVVRIHIQGMTCQSCVSKIEENLINSPGIRNIIVSLEDCLATVKFNPLEVTPEQLQNMIEDMGYEATLLTDKAKNVAVCSQDSNSHKMNSDQATGTLKVKGMTCMSCVHNIEDHIGTVKGIISIKVSLQENSATVQYQPSLISLQQIAEMIDNMGF...
AA_position 14
XM_022398101.1 - Limulus polyphemus (Atlantic horseshoe crab) - NCBI
PREDICTED: Limulus polyphemus copper-transporting ATPase 2-like (LOC106469561), transcript variant X2, mRNA. (2979 bp)
by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:106469561" CDS 223..2697 /gene="LOC106469561" /codon_start=1 /product="copper-transporting ATPase 2-like" /protein_id="XP_013785510.1" /db_xref="GeneID:106469561" /translation="MAEHATSIVAIEGMTCQSCVSTIEKNISSVPGVKSIKVYLGRKKAEITFDSRVVTIKELAAQIEDMGFEACPEDSIVSLPTLQDVTLRVQGMTCESCVRNIERRVSSQAGVHTVKVSLQEELARIAYNINETNPQTLLNIINEMGFTATVSPENTKSTKLQESSRNYSSVVRIHIQGMTCQSCVSKIEENLINSPGIRNIIVSLEDCLATVKFNPLEVTPEQLQNMIEDMGYEATLLTDKAKNVAVCSQDSNSHKMNSDQATGTLKVKGMTCMSCVHNIEDHIGTVKGIISIKVSLQENSATVQYQPSLISLQQIAEMIDNMGF...
AA_position 14
XM_013930056.2 - Limulus polyphemus (Atlantic horseshoe crab) - NCBI
PREDICTED: Haematobia irritans copper-transporting ATPase 1 (ATP7), mRNA. (4742 bp)
alignments, including 27 samples with support for all annotated introns" /db_xref="GeneID:142227920" CDS 267..4079 /gene="ATP7" /codon_start=1 /product="copper-transporting ATPase 1" /protein_id="XP_075154259.1" /db_xref="GeneID:142227920" /translation="MEEKTPFTSGNNSLQEIELLESKNMATIEEVRLDIVGMTCQSCVRNIETNISSKAGIIKCRVELEENAGYFTYDTSITNPTQIANDVDDMGFDCTYDEKESADSGSGHCVVRVLGMTCQSCVRNIEGNIGTKEGIKAIKVSLEDKKADVEYDSTKLTPDLIAEMIDDMGFDASLIEPTSRSLPDTKSLSSSPIKKSPTKSLDDNNQKVSKSPSKMVESNGHATSIPIENELLSKCFLHIRGMTCASCVAAIEKHCKKIYGIDSILVALLAAKAEVKYNGNAITPESIAKSITELGFPSEIIEEPNSGEAEVEIEILGMTCASCVNKIETHVKRMKGISEACVTLLT...
AA_position 38
XM_075298144.1 - Haematobia irritans (horn fly) - NCBI
Isaria fumosorosea ARSEF 2679 hypothetical protein (ISF_09486), partial mRNA. (609 bp)
GeneID:30025778" CDS 1..609 /locus_tag="ISF_09486" /codon_start=1 /product="hypothetical protein" /protein_id="XP_018699695.1" /db_xref="GeneID:30025778" /translation="MLNLHQCTLLTAAILSLLTTPVVGVDTCSTDASRWDYWWYGSGPRYNCAEGNVCHLSHIDQKTIGWSVTQGGSLSFSLAKSAALGFQSSYTWSESTTTGTTYTVDYHPPETERLWIKQWFAVLDMTCQSCDWVCYPMSQSVDNETDNETDTGLNVRGQHCQRACDPHRHVVAWVPCRDLSCTEYQFSNADAQCDHSNHCQHI" ORIGIN // REFERENCE 1 (bases 1 to 609) AUTHORS Shang,Y., Xiao,G., Zheng,P., Cen,K., Zhan,S. and Wang,C. TITLE Divergent and convergent evolution of fungal pathogenicity JOURNAL Genome Biol Evol (2016) In press PUBMED 27071652...
AA_position 125
XM_018853088.1 - Cordyceps fumosorosea ARSEF 2679 - NCBI
PREDICTED: Agelaius phoeniceus ATPase copper transporting beta (ATP7B), transcript variant X5, mRNA. (4441 bp)
gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X4" /protein_id="XP_077029840.1" /db_xref="GeneID:129134662" /translation="MERKLDNKMKRELSYLATLNDRNISLVSIRKQQAARDVPELLIIGEKSKTASPVKASSNLQKEEKLLQSYSMGMTEVNTDERQALSNIVSPPGCELKPTMKHNFAFDNIGYEASSETMPSPPSQEHTVVVNIVGMTCQSCVQSIEGRISKVNGILRIKVSLEQNNAVIKYRRSEISPEQICQEILDMGFDANIAEEKLTTATVNLPSLKEAVAKLRVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLDNQEAIIAYHPYIIQPDDLKRHISDLGYDCTIKSKSAPLKLGALDLQRLQNANPRETPANFGSDGLDPLVPKMGSTATVTVQIEGMHCKSCVRNIEGNISDLPGIKSIKVSLEHKCAVVQYSPDLITLSAFQQAIESLPPGNFKVSLLSGSEANKTASPSGAFTYNVIRQPPQGTTHVAVIKIDGMTCNSCVQSIEGAVSQRQG...
AA_position 135
XM_077173725.1 - Agelaius phoeniceus (red-winged blackbird) - NCBI
PREDICTED: Glandiceps talaboti copper chaperone for superoxide dismutase-like (LOC144447272), mRNA. (2387 bp)
alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:144447272" CDS 297..1058 /gene="LOC144447272" /codon_start=1 /product="copper chaperone for superoxide dismutase-like" /protein_id="XP_077993318.1" /db_xref="GeneID:144447272" /translation="MATATKMDVAVQMTCQSCVEDIKKRLDSIKDIKVLNISLANEQVVIETTLSTSQVVDILESTGRKAVILGQGSSTTGQSHLGAAVSMLEVGPVKGVIRFLQSDRNKCIIEGTLDGLSPGSHPLNIHELGDISQGCESCGDVFNPYEVPHGPPAGQRKVVGNLGNVLADDSGRAVFRKEDKLVKVWDIIGRSTIIHQPVDGSESGPGLACGIIARAAGLFQNTKKFCSCDGITIWEERDVPLAGLGRQQPHASL" misc_feature 327..1001 /gene="LOC144447272" /note="copper, zinc...
AA_position 13
XM_078137192.1 - Glandiceps talaboti - NCBI
PREDICTED: Lissotriton helveticus copper chaperone for superoxide dismutase (CCS), transcript variant X1, mRNA. (2309 bp)
RNAseq alignments, including 31 samples with support for all annotated introns" /db_xref="GeneID:144781823" CDS 113..922 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X1" /protein_id="XP_078516962.1" /db_xref="GeneID:144781823" /translation="MEKPRKQLEFAVQMTCQSCVQAVEQCLKGVQGIQAVTVNLEAESVLVDTSLTAEEVQDLIESTGRLAVLKGMGSTTQKDLGAAVAMVEGVNSIHGVVRFVQLSLEKCIIEGTIDGLKPGLHGLHVHTFGDLTDSFNKCGDHFNPDGKSHGDPKDSDRHVGDLGNILADEMGKAVFRMEDDHLKVWDIIGRSIVVDEREDDLGRGRNPLSKISGNSGERLAGGIIACSAGLFQNPKKICTCDGVTLWDERERTRASSGQSLRLPQPLANL" polyA_site 2309 /gene="CCS" /experiment="...
AA_position 14
XM_078660836.1 - Lissotriton helveticus (palmate newt) - NCBI
PREDICTED: Lingula anatina copper-transporting ATPase 1-like (LOC106175926), transcript variant X5, mRNA. (4468 bp)
by RNAseq alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:106175926" CDS 4..4374 /gene="LOC106175926" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X5" /protein_id="XP_013413593.1" /db_xref="GeneID:106175926" /translation="MMSEAVISIQGMTCQSCVKNIEVNMAAFPGISTIEVSLENQEGVVSFDPTVTTAEKIAEGIDDMGFEAKVKSPGSSPQEVTIYIEGMTCQSCVKNIEGAISMRSGVKQIKVSLSQKQASIRYDPSQTNPRTLREHIDDMGFEAFLEKPKQTVNVKIGVEGMTCQSCVKNIEGNMSSKPGVRHIQVSLERKEANITYDPSVVTAQMLRDQINDMGFEATLPSNGSSTSFDEFHELAKTRSHADFGKCRLHIEGMTCQSCIKNIEGVIGEFPGVKTIKVTLETKSADVTFDSSIVTAQAVADRISDMGFDCNVADQQ...
AA_position 12
XM_013558139.2 - Lingula anatina - NCBI
PREDICTED: Lingula anatina copper-transporting ATPase 1-like (LOC106175926), transcript variant X3, mRNA. (4498 bp)
by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:106175926" CDS 4..4404 /gene="LOC106175926" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X3" /protein_id="XP_013413576.1" /db_xref="GeneID:106175926" /translation="MMSEAVISIQGMTCQSCVKNIEVNMAAFPGISTIEVSLENQEGVVSFDPTVTTAEKIAEGIDDMGFEAKVKSPGSSPQEVTIYIEGMTCQSCVKNIEGAISMRSGVKQIKVSLSQKQASIRYDPSQTNPRTLREHIDDMGFEAFLEKPKQTVNVKIGVEGMTCQSCVKNIEGNMSSKPGVRHIQVSLERKEANITYDPSVVTAQMLRDQINDMGFEATLPSNGSSTSFDEFHELAKTRSHADFGKCRLHIEGMTCQSCIKNIEGVIGEFPGVKTIKVTLETKSADVTFDSSIVTAQAVADRISDMGFDCNVADQQD...
AA_position 12
XM_013558122.2 - Lingula anatina - NCBI
PREDICTED: Paroedura picta copper chaperone for superoxide dismutase (CCS), transcript variant X5, mRNA. (2105 bp)
feature by RNAseq alignments, including 9 samples with support for all annotated introns" /db_xref="GeneID:143833356" CDS 201..956 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X3" /protein_id="XP_077185221.1" /db_xref="GeneID:143833356" /translation="MTCQSCVEAVQAALQEVPGIQLLDVNLDSQSVLLETSLQTEKVHSLLESTGRKAVLKGMGGTMPQPFGSAAVAIISGPGSVQGVVRFLQMSQEKCLIDGTVDGLEPGSHGLHVHEFGDITSSCDSCGDHFNPDGNCHGGPQDLYRHAGDLGNILAADDGRASFRMEDSQLKVYDIIGRSLVVDAGEDDLGRGRHPLSKVTGNSGERVACGIIARSAGLFQNPKRVCTCDGVTLWEEQEKLGRKAASQPAHL" misc_feature 201..905 /gene="CCS" /note="copper, zinc...
AA_position 1
XM_077329106.1 - Paroedura picta - NCBI
PREDICTED: Lingula anatina copper-transporting ATPase 1-like (LOC106175926), transcript variant X2, mRNA. (6092 bp)
by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:106175926" CDS 4..4578 /gene="LOC106175926" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X2" /protein_id="XP_013413564.1" /db_xref="GeneID:106175926" /translation="MMSEAVISIQGMTCQSCVKNIEVNMAAFPGISTIEVSLENQEGVVSFDPTVTTAEKIAEGIDDMGFEAKVKSPGSSPQEVTIYIEGMTCQSCVKNIEGAISMRSGVKQIKVSLSQKQASIRYDPSQTNPRTLREHIDDMGFEAFLEKPKQTVNVKIGVEGMTCQSCVKNIEGNMSSKPGVRHIQVSLERKEANITYDPSVVTAQMLRDQINDMGFEATLPSNGSSTSFDEFHELAKTRSHADFGKCRLHIEGMTCQSCIKNIEGVIGEFPGVKTIKVTLETKSADVTFDSSIVTAQAVADRISDMGFDCNVADQQ...
AA_position 12
XM_013558110.1 - Lingula anatina - NCBI
PREDICTED: Lingula anatina copper-transporting ATPase 1-like (LOC106175926), transcript variant X1, mRNA. (6092 bp)
RNAseq alignments, including 12 samples with support for all annotated introns" /db_xref="GeneID:106175926" CDS 4..4578 /gene="LOC106175926" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X1" /protein_id="XP_013413555.1" /db_xref="GeneID:106175926" /translation="MMSEAVISIQGMTCQSCVKNIEVNMAAFPGISTIEVSLENQEGVVSFDPTVTTAEKIAEGIDDMGFEAKVKSPGSSPQEVTIYIEGMTCQSCVKNIEGAISMRSGVKQIKVSLSQKQASIRYDPSQTNPRTLREHIDDMGFEAFLEKPKQTVNVKIGVEGMTCQSCVKNIEGNMSSKPGVRHIQVSLERKEANITYDPSVVTAQMLRDQINDMGFEATLPSNGSSTSFDEFHELAKTRSHADFGKCRLHIEGMTCQSCIKNIEGVIGEFPGVKTIKVTLETKSADVTFDSSIVTAQAVADRISDMGFDCNVADQQDE...
AA_position 12
XM_013558101.1 - Lingula anatina - NCBI
PREDICTED: Paroedura picta copper chaperone for superoxide dismutase (CCS), transcript variant X4, mRNA. (2049 bp)
feature by RNAseq alignments, including 13 samples with support for all annotated introns" /db_xref="GeneID:143833356" CDS 145..900 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X3" /protein_id="XP_077185212.1" /db_xref="GeneID:143833356" /translation="MTCQSCVEAVQAALQEVPGIQLLDVNLDSQSVLLETSLQTEKVHSLLESTGRKAVLKGMGGTMPQPFGSAAVAIISGPGSVQGVVRFLQMSQEKCLIDGTVDGLEPGSHGLHVHEFGDITSSCDSCGDHFNPDGNCHGGPQDLYRHAGDLGNILAADDGRASFRMEDSQLKVYDIIGRSLVVDAGEDDLGRGRHPLSKVTGNSGERVACGIIARSAGLFQNPKRVCTCDGVTLWEEQEKLGRKAASQPAHL" misc_feature 145..849 /gene="CCS" /note="copper, zinc...
AA_position 1
XM_077329097.1 - Paroedura picta - NCBI
PREDICTED: Paroedura picta copper chaperone for superoxide dismutase (CCS), transcript variant X3, mRNA. (2251 bp)
feature by RNAseq alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:143833356" CDS 347..1102 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X3" /protein_id="XP_077185201.1" /db_xref="GeneID:143833356" /translation="MTCQSCVEAVQAALQEVPGIQLLDVNLDSQSVLLETSLQTEKVHSLLESTGRKAVLKGMGGTMPQPFGSAAVAIISGPGSVQGVVRFLQMSQEKCLIDGTVDGLEPGSHGLHVHEFGDITSSCDSCGDHFNPDGNCHGGPQDLYRHAGDLGNILAADDGRASFRMEDSQLKVYDIIGRSLVVDAGEDDLGRGRHPLSKVTGNSGERVACGIIARSAGLFQNPKRVCTCDGVTLWEEQEKLGRKAASQPAHL" misc_feature 347..1051 /gene="CCS" /note="copper,...
AA_position 1
XM_077329086.1 - Paroedura picta - NCBI
PREDICTED: Pteropus medius copper chaperone for superoxide dismutase (CCS), mRNA. (1093 bp)
by RNAseq alignments, including 104 samples with support for all annotated introns" /db_xref="GeneID:120584793" CDS 117..941 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase" /protein_id="XP_039696714.1" /db_xref="GeneID:120584793" /translation="MASDSGDRGTACTLEFAVQMTCQSCVDAVRKSLQGVAGIHGVEVQLENQMVLLQTTLPSQEVQALLEGTGRQAVLKGMGSDLLQNLGAAVAILGGPGPVQGVVRFLQLAPERCLIEGTIDGLEPGLHGLHVHQFGDLTKNCNSCGDHFNPDGTSHGGPQDAHRHRGDLGNVRADADGRANFRIEDEQLKIWDVIGRSLVIDEGEDDLGRGGHPLSKITGNSGKSLACGIIARSAGLFQNSKQICSCDGLTIWEERGRPIAGEGRKEPAQPPAHL" misc_feature 156..875 /gene="CCS" /note="copper...
AA_position 20
XM_039840780.1 - Pteropus medius (Indian flying fox) - NCBI
PREDICTED: Canis aureus copper chaperone for superoxide dismutase (CCS), transcript variant X3, mRNA. (1121 bp)
feature by RNAseq alignments, including 55 samples with support for all annotated introns" /db_xref="GeneID:144292377" CDS 192..959 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X3" /protein_id="XP_077718666.1" /db_xref="GeneID:144292377" /translation="MTCQSCVDAVRTSLQGVAGIQSVKVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQFGDLTGNCNSCGDHFNPDGASHGGPKDSDRHRGDLGNVHAGTDGRAIFRIEDEQLKVWDVIGRSLVIDEGEDDLGLGGHPLSKVTGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKEPAKPPAHL" misc_feature 192..893 /gene="CCS" /note="copper,...
AA_position 1
XM_077862540.1 - Canis aureus (golden jackal) - NCBI
PREDICTED: Paroedura picta copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (2077 bp)
alignments, including 12 samples with support for all annotated introns" /db_xref="GeneID:143833356" CDS 122..928 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_077185192.1" /db_xref="GeneID:143833356" /translation="MHLDILLHTAKLEFAVQMTCQSCVEAVQAALQEVPGIQLLDVNLDSQSVLLETSLQTEKVHSLLESTGRKAVLKGMGGTMPQPFGSAAVAIISGPGSVQGVVRFLQMSQEKCLIDGTVDGLEPGSHGLHVHEFGDITSSCDSCGDHFNPDGNCHGGPQDLYRHAGDLGNILAADDGRASFRMEDSQLKVYDIIGRSLVVDAGEDDLGRGRHPLSKVTGNSGERVACGIIARSAGLFQNPKRVCTCDGVTLWEEQEKLGRKAASQPAHL" misc_feature 155..877 /gene="CCS" /note="copper, zinc...
AA_position 18
XM_077329077.1 - Paroedura picta - NCBI
PREDICTED: Agelaius phoeniceus ATPase copper transporting beta (ATP7B), transcript variant X2, mRNA. (6411 bp)
gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X2" /protein_id="XP_077029837.1" /db_xref="GeneID:129134662" /translation="MERKLDNKMKRELSYLATLNDRNISLVSIRKQQAARDVPELLIIGEKSKTASPVKASSNLQKEEKLLQSYSMGMTEVNTDERQALSNIVSPPGCELKPTMKHNFAFDNIGYEASSETMPSPPSQEHTVVVNIVGMTCQSCVQSIEGRISKVNGILRIKVSLEQNNAVIKYRRSEISPEQICQEILDMGFDANIAEEKLTTATVNLPSLKEAVAKLRVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLDNQEAIIAYHPYIIQPDDLKRHISDLGYDCTIKSKSAPLKLGALDLQRLQNANPRETPANFGSDGLDPLVPKMGSTATVTVQIEGMHCKSCVRNIEGNISDLPGIKSIKVSLEHKCAVVQYSPDLITLSAFQQAIESLPPGNFKVSLLSGSEANKTASPSGAFTYNVIRQPPQGTTHVAVIKIDGMTCNSCVQSIEGAVSQRQG...
AA_position 135
XM_077173722.1 - Agelaius phoeniceus (red-winged blackbird) - NCBI
PREDICTED: Centruroides sculpturatus copper chaperone for superoxide dismutase-like (LOC111613636), transcript variant X2, mRNA. (956 bp)
RNAseq alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:111613636" CDS 110..841 /gene="LOC111613636" /codon_start=1 /product="copper chaperone for superoxide dismutase-like isoform X2" /protein_id="XP_023210758.1" /db_xref="GeneID:111613636" /translation="MTCQSCVNSVERALRNLDVKKVEIDLNNQQVVVETSLPYSEILHHIEQTGRRAVLKGYGSISGGAAVAEIFGKNGIMGIVRFAHINDSSCIIDGTVDGLKGEHGLHICEFGDLTNDCENVGGHYNPSNKMHGSPEDNERHYGDLGNIRADKNGRAVFRKEDSTVKVWEIIGRSLVITEHKDDLGRGNNERSKIDGNSGQKLACGIIARSAGLFQNPKRICLCDGVSVWDEREKPVAGESRAKY" misc_feature 110..796 /gene="LOC111613636" /note="copper,...
AA_position 1
XM_023354990.1 - Centruroides sculpturatus (bark scorpion) - NCBI
PREDICTED: Paroedura picta copper chaperone for superoxide dismutase (CCS), transcript variant X1, mRNA. (2052 bp)
alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:143833356" CDS 88..903 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X1" /protein_id="XP_077185184.1" /db_xref="GeneID:143833356" /translation="MEAASGGAGGVRCRLEFAVQMTCQSCVEAVQAALQEVPGIQLLDVNLDSQSVLLETSLQTEKVHSLLESTGRKAVLKGMGGTMPQPFGSAAVAIISGPGSVQGVVRFLQMSQEKCLIDGTVDGLEPGSHGLHVHEFGDITSSCDSCGDHFNPDGNCHGGPQDLYRHAGDLGNILAADDGRASFRMEDSQLKVYDIIGRSLVVDAGEDDLGRGRHPLSKVTGNSGERVACGIIARSAGLFQNPKRVCTCDGVTLWEEQEKLGRKAASQPAHL" misc_feature 130..852 /gene="CCS" /note="copper,...
AA_position 21
XM_077329069.1 - Paroedura picta - NCBI
PREDICTED: Tenrec ecaudatus ATPase copper transporting beta (ATP7B), mRNA. (6438 bp)
Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:142461195" CDS 46..4299 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2" /protein_id="XP_075418992.1" /db_xref="GeneID:142461195" /translation="MKQDFAYDNAGYESSENSVATSTVHIVGMTCQSCVKTIESMVSSIDGLVSVKVSLEQGSAAVRYMPSVVSLQQICYLIEDMGFEASVPEGKAASWPPRPSPVGEALVKLRVEGMTCQSCVNSIEGNLGKLQGVVRAKVSLGNQEAVIAYQPYLIQPEDLRDHVNDMGFEATIKHKAAPLSLGPIDIGRLQSTNPKRLSAPVPQSPRGPEPPGDQGSPSVTLQLRVEGMRCKSCVFNIENNIGRLPGVREIQVSLEHGTARVHLEPSLISPETLQEAIEALPPGNFQVSLPGGSEGSGTECLPGVGPAERQAPGCSQRSEEPGVHRRVTLAIAGMMDA...
AA_position 29
XM_075562877.1 - Tenrec ecaudatus (tailess tenrec) - NCBI
PREDICTED: Littorina saxatilis copper-transporting ATPase 1-like (LOC138969207), transcript variant X8, mRNA. (11944 bp)
to: 11 Proteins" /db_xref="GeneID:138969207" CDS 1173..6050 /gene="LOC138969207" /codon_start=1 /product="copper-transporting ATPase 1-like isoform X5" /protein_id="XP_070198050.1" /db_xref="GeneID:138969207" /translation="MGSRSKKGFQRLPVQYETREARVRYRPTETNPPILLGVLEDRAFSATIMDIQQSGDAASQKVAIDVDGMTCQSCVRNIEGNISHLDGVKDIHVSLENKQALVVFDASQTSASAVAEGISNMGFDAKVALGGDSGEQTRVIRVEGMTCQSCVRTIEGTMGSKQGISSIRVSLPDNQAIVRFNPCLISARQICEQIDDMGFDASLSDDEFAEIATRNKTPGSSRQCVISIGGMTCNSCVKNIESNISDKPGVKAIKVSLADQNGVVTYDPQIVKAAEIAEMIDDMGFDAKVAQQEDESLSDDEFAQIAARKAGGNGRKSCVISIQGMTCNSCVKNIESNIGAQPGILNIKVSLTDSNGVVTYDSKVTDPAKIAEMIDDM...
AA_position 69
XM_070341949.1 - Littorina saxatilis - NCBI
PREDICTED: Canis aureus copper chaperone for superoxide dismutase (CCS), transcript variant X2, mRNA. (1124 bp)
alignments, including 63 samples with support for all annotated introns" /db_xref="GeneID:144292377" CDS 138..962 /gene="CCS" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X2" /protein_id="XP_077718665.1" /db_xref="GeneID:144292377" /translation="MASDSEDRGTACTLEFTVQMTCQSCVDAVRTSLQGVAGIQSVKVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQFGDLTGNCNSCGDHFNPDGASHGGPKDSDRHRGDLGNVHAGTDGRAIFRIEDEQLKVWDVIGRSLVIDEGEDDLGLGGHPLSKVTGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKEPAKPPAHL" misc_feature 177..896 /gene="CCS" /note="copper...
AA_position 20
XM_077862539.1 - Canis aureus (golden jackal) - NCBI
Rhizophagus irregularis uncharacterized protein (OCT59_001906), mRNA. (4143 bp)
InterPro:IPR023298" /db_xref="InterPro:IPR023299" /db_xref="InterPro:IPR027256" /db_xref="InterPro:IPR036163" /db_xref="InterPro:IPR036412" /db_xref="InterPro:IPR044492" /db_xref="PFAM:PF00122" /db_xref="PFAM:PF00403" /db_xref="PFAM:PF00702" /translation="MDKTDVHSRAVDIIEDLGDNAITDSKDSTAQAEVIPINGMTCQSCVKSITNAVSSLSGILNITVSLENKEASISFDSNKVSKSTIIETIENCGFDVPLTSDISMVDKVIPINGMTCQSCVRSITNAVSSLSGILNITVSLENNEASVSFDSNKITLSTIIETIEDCGFDVPLTSDISMVDKVIPINGMTCQSCVRSITNAVSLLPGIVNITVSLENNEASVSFDPNKITLSTIIETIENCGFDVPLASDIANINSTEFASFTNITLKQSQEEESYPLKVIKTHSFDQDNIQVCHIQVLGMTCASCVNSIEKNCCEAAGIISIKVSLLAERAIVEYDPDILDESS...
AA_position 40
XM_025322718.2 - Rhizophagus irregularis (Glomus irregulare) - NCBI
PREDICTED: Centruroides sculpturatus copper chaperone for superoxide dismutase-like (LOC111613636), transcript variant X1, mRNA. (991 bp)
including 8 samples with support for all annotated introns" /db_xref="GeneID:111613636" CDS 112..876 /gene="LOC111613636" /codon_start=1 /product="copper chaperone for superoxide dismutase-like isoform X1" /protein_id="XP_023210756.1" /db_xref="GeneID:111613636" /translation="MSTAKLEFDVEMTCQSCVNSVERALRNLDVKKVEIDLNNQQVVVETSLPYSEILHHIEQTGRRAVLKGYGSISGGAAVAEIFGKNGIMGIVRFAHINDSSCIIDGTVDGLKGEHGLHICEFGDLTNDCENVGGHYNPSNKMHGSPEDNERHYGDLGNIRADKNGRAVFRKEDSTVKVWEIIGRSLVITEHKDDLGRGNNERSKIDGNSGQKLACGIIARSAGLFQNPKRICLCDGVSVWDEREKPVAGESRAKY" misc_feature 127..831 /gene="LOC111613636" /note="copper, zinc...
AA_position 12
XM_023354988.1 - Centruroides sculpturatus (bark scorpion) - NCBI
PREDICTED: Enhydra lutris kenyoni copper chaperone for superoxide dismutase (LOC111150046), transcript variant X1, mRNA. (1069 bp)
including 1 sample with support for all annotated introns" /db_xref="GeneID:111150046" CDS 75..899 /gene="LOC111150046" /codon_start=1 /product="copper chaperone for superoxide dismutase isoform X1" /protein_id="XP_022363074.1" /db_xref="GeneID:111150046" /translation="MASDSGDRGTACTLEFTVQMTCQSCVDAVRTSLQGVAGVQNVEVQLENQMVLVQTTLPSQEVQALLEGTGRQAVLKGMGSGLLQNLGAAVAILEGPGPVQGVVRFLQLTSERCLIEGTIDGLEPGLHGLHVHQFGDLTGSCDSCGDHFNPDGASHGGPQDSDRHRGDLGNVHADADGRASFRIEDEQLKVWDVIGRSLVIDEREDDLGRGDHPLSKVTGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGEGRKEPAKPPAHL" misc_feature 114..833 /gene="LOC111150046" /note="...
AA_position 20
XM_022507366.1 - Enhydra lutris kenyoni (northern sea otter) - NCBI

Data Export:

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Redirect URI : https://172.18.8.233:20082/en/MTCQSC
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0.000 | 0.000 | search_start;
0.084 | 0.084 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:MTCQSC)%7C(nt:MTCQSC)%7C(aa:MTCQSC))?to=0&format=json
0.174 | 0.089 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:MTCQSC)%7C(nt:MTCQSC)%7C(aa:MTCQSC))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.180 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]