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2024-03-29 09:25:18, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Oryza sativa Japonica Group disease resistance protein PIK6-NP-like (LOC107281440), mRNA. (500 bp)
samples with support for all annotated introns" /db_xref="GeneID:107281440" CDS 168..467 /gene="LOC107281440" /codon_start=1 /product="disease resistance protein PIK6-NP-like" /protein_id="XP_015643813.1" /db_xref="GeneID:107281440" /translation="MAETVLSMARSLVGSAISKAASAAANETSLLLGVEKDIWYIKDELKTMQAFLRAAEVMKKKDELLKVWAEQIRDLSYDIEDSLMNLKSILKAKPYFVSW" misc_feature 243..>416 /gene="LOC107281440" /note="Coiled-coil domain of the potato virux X resistance protein and similar proteins; Region: RX-CC_like; cd14798" /db_xref="CDD:271353" ORIGIN //...
AA_position 42
XM_015788327.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group thioredoxin H2-2-like (LOC4334453), mRNA. (775 bp)
OsTrx10; OsTrxh2-2" /note="LOC_Os03g58630; OSJNBa0052F07.8" /codon_start=1 /product="thioredoxin H2-2" /protein_id="NP_001405766.1" /db_xref="GeneID:4334453" /translation="MGSFFSTMFTPPPAADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCGPCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAKKDELERKVNMFI" misc_feature 108..167 /gene="LOC4334453" /gene_synonym="OsJ_12982; OsTrx10; OsTrxh2-2" /note="propagated from UniProtKB/Swiss-Prot (Q851R5.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 237..485 /gene="LOC4334453" /gene_synonym="OsJ_12982; OsTrx10; OsTrxh2-2" /note="...
AA_position 118
Synonym: OsJ_12982; OsTrx10; OsTrxh2-2
NM_001418837.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group thioredoxin H2-1-like (LOC4342618), mRNA. (1329 bp)
note="OSJNBb0003E08.27; putative thioredoxin; LOC_Os07g09310" /codon_start=1 /product="thioredoxin H2-1" /protein_id="NP_001408957.1" /db_xref="GeneID:4342618" /translation="MGGAFSTSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTINTLRTATTT" misc_feature 651..710 /gene="LOC4342618" /gene_synonym="OsJ_23401; OsTrx24; OsTrxh2-1" /note="propagated from UniProtKB/Swiss-Prot (Q6Z4I3.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 756..1025 /gene="LOC4342618" /gene_synonym="OsJ_23401; OsTrx24; OsTrxh2-1" /...
AA_position 117
Synonym: OsJ_23401; OsTrx24; OsTrxh2-1
NM_001422028.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group uncharacterized LOC4343647 (LOC4343647), transcript variant 1, mRNA. (711 bp)
is encoded by transcript variant 1; Os07g0568900" /codon_start=1 /product="uncharacterized LOC4343647 isoform 1" /protein_id="NP_001390049.1" /db_xref="GeneID:4343647" /translation="MHLRFVPFPAIAVGGASLRFLADNTRAVGGSGRRRCSDVVAFSSSEKGPGPGSGEEREPRAEEALRRLAELDSQLEGLSEPRERPPAPPLPPDPYMDRDMITGRGSKDELPEFSPTYVTFSTLALVILTIFTNVVFNLYIKPSVDGVDQPVRIERVPMVNPADQQFK" exon 309..711 /gene="LOC4343647" /gene_synonym="OJ1019_E02.7" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 711) AUTHORS Jantasuriyarat C, Gowda M, Haller K, Hatfield J, Lu G, Stahlberg E, Zhou B, Li H, Kim H, Yu Y, Dean RA,...
AA_position 107
Synonym: OJ1019_E02.7
NM_001403120.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group disease resistance protein PIK6-NP-like (LOC107281202), mRNA. (2222 bp)
samples with support for all annotated introns" /db_xref="GeneID:107281202" CDS 1512..2075 /gene="LOC107281202" /codon_start=1 /product="disease resistance protein PIK6-NP-like" /protein_id="XP_015642059.1" /db_xref="GeneID:107281202" /translation="MAETVLSMARSLVGSAISKATSAAAHEASLLLGVQKDIWYIKDELKTMQAFLRAAEVMKKKDELLKVWAEQIRDLSYDIEDCLDEFKVHIESQNLFYQMVKLRKRHLIATQIRNLKSRVEEVSSRNSRYNLVKPISSSNEDDMDCYAEDIRNQSTSNVDETELVGFSDSKIRLLELISANVIMVQPK" misc_feature 1542..1883 /gene="LOC107281202" /note="Coiled-coil domain of the potato virux X resistance protein and similar proteins; Region: RX-CC_like;...
AA_position 42
XM_015786573.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group ADP-ribosylation factor-like protein 5 (LOC4350802), mRNA. (1047 bp)
CDS 220..774 /gene="LOC4350802" /note="Os11g0586900" /codon_start=1 /product="ADP-ribosylation factor-like protein 5" /protein_id="NP_001412609.1" /db_xref="GeneID:4350802" /translation="MGAWMSRVWFLMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNIRFEVWDLGGQESLRTSWATYYRGTHAVIVVIDSTDRARINIIKDELFRLLQHGDLEGAVVLVFANKQDLKDAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKVAGKATTS" exon 412..1047 /gene="LOC4350802" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1047) AUTHORS Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, Yamada H, Ooka H,...
AA_position 104
NM_001425680.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group 60S ribosomal protein L9-like (LOC4347422), mRNA. (995 bp)
ribosomal protein L9" /codon_start=1 /product="large ribosomal subunit protein uL6" /protein_id="NP_001390775.1" /db_xref="GeneID:4347422" /translation="MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITEDA" misc_feature 115..684 /gene="LOC4347422" /gene_synonym="OsJ_29817; RPL9; YK426" /note="60S ribosomal protein L6; Provisional; Region: PTZ00027" /db_xref="CDD:240234" exon 478..600 /gene="LOC4347422" /gene_synonym="OsJ_29817; RPL9; YK426" /inference="...
AA_position 140
Synonym: OsJ_29817; RPL9; YK426
NM_001403846.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group MADS-box transcription factor 30-like (LOC4341786), transcript variant 1, mRNA. (1272 bp)
LOC_Os06g45650" /codon_start=1 /product="MADS-box transcription factor 30" /protein_id="NP_001408621.1" /db_xref="GeneID:4341786" /translation="MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKILLLNVITIMILAAMISITHARIALDDCMQLGYIVIKQENSWRFWFI" misc_feature 224..436 /gene="LOC4341786" /gene_synonym="MADS30; OsMADS30" /note="MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS...
AA_position 143
Synonym: MADS30; OsMADS30
NM_001421692.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group nicotinamide/nicotinic acid mononucleotide adenylyltransferase-like (LOC4331124), mRNA. (1292 bp)
mononucleotide adenylyltransferase; Nicotinate-nucleotide adenylyltransferase" /codon_start=1 /product="nicotinamide/nicotinic acid mononucleotide adenylyltransferase" /protein_id="NP_001404010.1" /db_xref="GeneID:4331124" /translation="MEELELPLPTEKLAVDPGREGGKRGVAVLVATGSFNPPTYMHLRMFELAKDELQQRGYSVLGGYMSPVNDAYKKKGLLSAAHRIRLCELACESSSFVMVDRWEAMQKGFQRTLTVLSRIRNALSKDGLADGGSPNVMLLCGSDLLESFSTPGVWIPDQVRIICKDFGVICIRREGKDVEKIISSSEILNECRDNIISVDEIVPNQISSSRVRECIKKCLSIKYLVCDEVIQYIGEHKLYKEADGSDTRK" misc_feature 184..894 /gene="LOC4331124" /gene_synonym="OJ1293_E04.25; OsJ_08854" /note="nicotinamide-nucleotide...
AA_position 50
Synonym: OJ1293_E04.25; OsJ_08854
NM_001417081.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346387 (LOC4346387), mRNA. (688 bp)
feature by RNAseq alignments, including 96 samples with support for all annotated introns" /db_xref="GeneID:4346387" CDS 160..387 /gene="LOC4346387" /codon_start=1 /product="uncharacterized protein LOC4346387" /protein_id="XP_015612568.1" /db_xref="GeneID:4346387" /translation="MSSTNTTSNDPKTTKDELAPPAPTAAEHGGGKDAVTKTVQTVEVKESVGQEPVLKPTKVVHQIPADQAKDAPKQD" ORIGIN //...
AA_position 15
XM_015757082.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group thioredoxin H-type (LOC4339267), mRNA. (734 bp)
introns" /db_xref="GeneID:4339267" CDS 164..529 /gene="LOC4339267" /codon_start=1 /product="thioredoxin H-type" /protein_id="XP_015640796.1" /db_xref="GeneID:4339267" /translation="MAAASAAAQAEGTVIAIHSLDEWTIQIEEANSAKKLVVIDFTASWCGPCRIIAPVFADLAKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAMKDELASKLELHMAM" misc_feature 239..511 /gene="LOC4339267" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the...
AA_position 108
XM_015785310.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group fructose-bisphosphate aldolase 3, cytoplasmic-like (LOC4325027), mRNA. (1540 bp)
FBA3" /EC_number="4.1.2.13" /note="putative fructose-bisphosphate aldolase isoenzyme C-1; B1417F08.1-2; LOC_Os01g67860; B1417F08.1-1; Aldolase C-1" /codon_start=1 /product="fructose-bisphosphate aldolase 3, cytoplasmic" /protein_id="NP_001393114.1" /db_xref="GeneID:4325027" /translation="MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGALQHLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESKKVSPQLIAEYTVRALQRTVPAAVPAIVFLSGGQSEEEATVNLNAMNKLSTKKPWALSFSFGRALQQSTLKAWGGK...
AA_position 9
Synonym: AldC-1; aldolase; FBA3
NM_001406185.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group fructose-bisphosphate aldolase 1, cytoplasmic-like (FBA1), mRNA. (1442 bp)
protein GSC 233; LOC_Os05g33380; OSJNBa0035J16.18; OSJNBb0006J12.6; fructose-bisphosphate aldolase cytoplasmic isozyme; cytoplasmic aldolase" /codon_start=1 /product="fructose-bisphosphate aldolase 1, cytoplasmic" /protein_id="NP_001389453.1" /db_xref="GeneID:4338737" /translation="MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEK...
AA_position 9
Synonym: cALD; FBA
NM_001402524.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group UDP-arabinopyranose mutase 1-like (LOC4333393), mRNA. (1565 bp)
UAM1" /EC_number="5.4.99.30" /note="alpha-1,4-glucan protein synthase; LOC_Os03g40270; Reversibly glycosylated polypeptide 1; UDP-L-arabinose mutase 1" /codon_start=1 /product="uDP-arabinopyranose mutase 1" /protein_id="NP_001389114.1" /db_xref="GeneID:4333393" /translation="MAGTVTVPSASVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMVKPRERNSRYVDAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATIPKECDTVQKCYLSLAEQVR...
AA_position 19
Synonym: OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1; UAM1
NM_001402185.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group sm-like protein LSM1B (LOC4335963), mRNA. (990 bp)
support for all annotated introns" /db_xref="GeneID:4335963" CDS 235..624 /gene="LOC4335963" /codon_start=1 /product="sm-like protein LSM1B" /protein_id="XP_015633580.1" /db_xref="GeneID:4335963" /translation="MSSWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD" misc_feature 271..483 /gene="LOC4335963" /note="Like-Sm protein 1; Region: LSm1; cd01728" /db_xref="CDD:212475" misc_feature order(280..282,289..294,307..309,313..321,328..330, 334..336,349..360,367..372,376..378,439..477) /gene="LOC4335963" /note="putative...
AA_position 87
XM_015778094.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group fructose-bisphosphate aldolase 2, cytoplasmic-like (LOC107277365), mRNA. (1504 bp)
gene_synonym="AldC-alpha; FBA2; OsJ_30817" /EC_number="4.1.2.13" /note="cytoplasmic aldolase; Cytoplasmic aldolase-alpha; LOC_Os10g08022" /codon_start=1 /product="fructose-bisphosphate aldolase 2, cytoplasmic" /protein_id="NP_001412637.1" /db_xref="GeneID:107277365" /translation="MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEDNRRAFRELLFCTPGALQYISGVILFDETLYQKTKDGKPFVDVLKEAGALPGIKVDKGTIEVAGTDKETTTQGHDDLGKQCAKYYEAGARFAKWRAVLKIGPNQPSQLAIDLNAQGLACYAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKVAPEVIAEYTVRTLQRTVPPAVPAIVFLSGGQSEEEATLNLNAMNKLSAKKPWSLSFSFGRALQQSTLKAWAGKTENVEKAR...
AA_position 9
Synonym: AldC-alpha; FBA2; OsJ_30817
NM_001425708.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group UDP-arabinopyranose mutase 3-like (LOC4343849), mRNA. (1413 bp)
note="OSJNBb0040H10.21; putative reversibly glycosylated polypeptide; LOC_Os07g41360; Reversibly glycosylated polypeptide 3; UDP-L-arabinose mutase 3" /codon_start=1 /product="uDP-arabinopyranose mutase 3" /protein_id="NP_001409188.1" /db_xref="GeneID:4343849" /translation="MASSDAAAAQAATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPKKTIRVPEGFDYELYNRDDINRILGPRASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLNPSTPFFFNTLYDPYRDGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPLERNSRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVITDHLGLGVKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSASLPKEADTVQKCYLELAKQVRAKL...
AA_position 17
Synonym: OsJ_25044; OsUAM3; RGP3; UAM3
NM_001422259.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase MARCH2 (LOC4324432), transcript variant X3, mRNA. (1271 bp)
support for all annotated introns" /db_xref="GeneID:4324432" CDS 297..734 /gene="LOC4324432" /codon_start=1 /product="E3 ubiquitin-protein ligase MARCH2 isoform X3" /protein_id="XP_015627663.1" /db_xref="GeneID:4324432" /translation="MRRDAAAVPTAAVASPPISVEAVVIDVEGDPAVPAGAACRICHLVPEGGVGPGSEVIRIGCGCKDELGAAHRHCAEAWFRIKGDRRCEICGSDAKNIIGLEVKKFMEEWHGPRLANTRTTTQRVSALFLVSTYTSVYLYWFDFNG" misc_feature 411..569 /gene="LOC4324432" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:450175" misc_feature order...
AA_position 64
XM_015772177.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group shaggy-related protein kinase alpha (LOC4327108), transcript variant 2, mRNA. (2068 bp)
protein kinase gamma" /codon_start=1 /product="shaggy-related protein kinase alpha" /protein_id="NP_001395976.1" /db_xref="GeneID:4327108" /translation="MGSVGVAPSGLKNSSSTSMGAEKLPDQMHDLKIRDDKEVEATIINGKGTETGHIIVTTTGGRNGQPKQTVSYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHRVVKHYNKMNQRMPLIYVKLYMYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRLPPEAVDLVSRLLQYSPNLRCTAVEALVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGIPSDIMAKLIPEHVKKQCSYAGV" misc_feature 521..1399 /gene="...
AA_position 138
Synonym: OSKgamma
NM_001409047.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group shaggy-related protein kinase alpha (LOC4327108), transcript variant 1, mRNA. (2030 bp)
protein kinase gamma" /codon_start=1 /product="shaggy-related protein kinase alpha" /protein_id="NP_001395975.1" /db_xref="GeneID:4327108" /translation="MGSVGVAPSGLKNSSSTSMGAEKLPDQMHDLKIRDDKEVEATIINGKGTETGHIIVTTTGGRNGQPKQTVSYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHRVVKHYNKMNQRMPLIYVKLYMYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRLPPEAVDLVSRLLQYSPNLRCTAVEALVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGIPSDIMAKLIPEHVKKQCSYAGV" misc_feature 483..1361 /gene="...
AA_position 138
Synonym: OSKgamma
NM_001409046.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group chaperone protein dnaJ A6-like (LOC4336584), transcript variant 2, mRNA. (1665 bp)
gene_synonym="DJA6; OsDjA6; OsJ_15688; RNB8" /note="DnaJ family heat shock protein; LOC_Os04g46390; OSJNBb0034G17.1; dnaJ protein homolog 2" /codon_start=1 /product="chaperone protein dnaJ A6" /protein_id="NP_001389337.1" /db_xref="GeneID:4336584" /translation="MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGAFGGSSSRVRRQRRGEDVAHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPATCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSGEIISDRDKCTNCRASKVIQEKKVLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFVEFNV...
AA_position 25
Synonym: DJA6; OsDjA6; OsJ_15688; RNB8
NM_001402408.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group chaperone protein dnaJ A6-like (LOC4336584), transcript variant 1, mRNA. (1703 bp)
gene_synonym="DJA6; OsDjA6; OsJ_15688; RNB8" /note="DnaJ family heat shock protein; LOC_Os04g46390; OSJNBb0034G17.1; dnaJ protein homolog 2" /codon_start=1 /product="chaperone protein dnaJ A6" /protein_id="NP_001389336.1" /db_xref="GeneID:4336584" /translation="MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGAFGGSSSRVRRQRRGEDVAHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPATCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSGEIISDRDKCTNCRASKVIQEKKVLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFVEFNV...
AA_position 25
Synonym: DJA6; OsDjA6; OsJ_15688; RNB8
NM_001402407.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group heptahelical transmembrane protein ADIPOR3-like (LOC4332161), mRNA. (2110 bp)
protein ADIPOR3" /codon_start=1 /product="heptahelical transmembrane protein ADIPOR3" /protein_id="NP_001404370.1" /db_xref="GeneID:4332161" /translation="MAAAAGEEVEAARWAEAEDERKEGLYGLVEYRALPGYMRDNEYILRHYRCEWPLPQVLLSAFSIHNETLNVWTHLIGFFIFLVLTIYTATQVPNVVDLQSLQHLPDVLRNADLHKIQTELVACLPSLPHLSDLQKLKDELKSSWNSIEVLPSLSRWHLLELLSSCLPHRFTHSNETSLSVLQSMKEDIANMIAPQLIRPIPRWPFYAFLGGAMFCLLASSTCHLLSCHSRRLAYIMLRLDYAGIAALIATSFYPPVYYSFMCYPFFCNLYLSCITILGVATIAFSLLPVFQNPEFRTIRACLFFGMGASGVIPVIHKLILFWHQPEALHTTAYEVLMGLFYGIGALVYATRVPERWMPGKFDIAGHSHQLFHVLVVAGAYTHYHSGLVYLKWRDVQGC" misc_feature 753..815 /gene="LOC4332161" /...
AA_position 142
Synonym: ADIPOR3; OJ1175C11.13
NM_001417441.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase MARCH2 (LOC4324432), transcript variant X2, mRNA. (1989 bp)
support for all annotated introns" /db_xref="GeneID:4324432" CDS 297..767 /gene="LOC4324432" /codon_start=1 /product="E3 ubiquitin-protein ligase MARCH2 isoform X2" /protein_id="XP_015627656.1" /db_xref="GeneID:4324432" /translation="MRRDAAAVPTAAVASPPISVEAVVIDVEGDPAVPAGAACRICHLVPEGGVGPGSEVIRIGCGCKDELGAAHRHCAEAWFRIKGDRRCEICGSDAKNIIGLEVKKFMEEWHGPRLANTRTTTQRVSALFLVSTYTRYMLLPSIPPDYSSYVMSSLRC" misc_feature 411..569 /gene="LOC4324432" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:450175" misc_feature order...
AA_position 64
XM_015772170.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase MARCH2 (LOC4324432), transcript variant X1, mRNA. (3238 bp)
support for all annotated introns" /db_xref="GeneID:4324432" CDS 289..759 /gene="LOC4324432" /codon_start=1 /product="uncharacterized protein LOC4324432 isoform X1" /protein_id="XP_025876550.1" /db_xref="GeneID:4324432" /translation="MRRDAAAVPTAAVASPPISVEAVVIDVEGDPAVPAGAACRICHLVPEGGVGPGSEVIRIGCGCKDELGAAHRHCAEAWFRIKGDRRCEICGSDAKNIIGLEVKKFMEEWHGPRLANTRTTTQRESTCWRTQPFCNFLLACLLIAFMLPWFLRVNMF" misc_feature 397..>756 /gene="LOC4324432" /note="E3 ubiquitin-protein ligase DOA10 [Posttranslational modification, protein turnover, chaperones]; Region: SSM4; COG5183" /db_xref="CDD:227510" misc_feature...
AA_position 64
XM_026020765.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278287 (LOC107278287), transcript variant X4, mRNA. (2911 bp)
all annotated introns" /db_xref="GeneID:107278287" CDS 551..1033 /gene="LOC107278287" /codon_start=1 /product="uncharacterized protein LOC107278287 isoform X2" /protein_id="XP_025878045.1" /db_xref="GeneID:107278287" /translation="MSLEPASPSADSGVTSLTSTANNVAVVVRGGDSDDSDDSDSSDGVGYDSDDLMDDMMDDIFEQFIEKDELLDRIGARLVAPLLPAATRAQRRQVLEQREQARAAREELRRGVARSRELTRKIRRLKRMANADVSGYPAARREAHERETRRLAREIFGSDA" ORIGIN //...
AA_position 67
XM_026022260.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278287 (LOC107278287), transcript variant X3, mRNA. (7106 bp)
all annotated introns" /db_xref="GeneID:107278287" CDS 142..624 /gene="LOC107278287" /codon_start=1 /product="uncharacterized protein LOC107278287 isoform X2" /protein_id="XP_025878044.1" /db_xref="GeneID:107278287" /translation="MSLEPASPSADSGVTSLTSTANNVAVVVRGGDSDDSDDSDSSDGVGYDSDDLMDDMMDDIFEQFIEKDELLDRIGARLVAPLLPAATRAQRRQVLEQREQARAAREELRRGVARSRELTRKIRRLKRMANADVSGYPAARREAHERETRRLAREIFGSDA" ORIGIN //...
AA_position 67
XM_026022259.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group auxin-binding protein 4 (LOC107277066), mRNA. (651 bp)
LOC107277066" /codon_start=1 /product="auxin-binding protein 4" /protein_id="XP_025877817.1" /db_xref="GeneID:107277066" /translation="MCHQSWLERVLTVSGVCSDNSVVKDIRQMPQGTLAHGMKEVEVCLQTFGPGQRTPIHRHSCEEVFVVLKGKGTLFLGSSSMKYPGQPQEIPVFQNSTFTIPVNDPHQVWNSDEHEDLQVIVVISRPPIKVFFYDDWNMPHTAAKLQFPIFWDEECLIAPKDEL" misc_feature 220..627 /gene="LOC107277066" /note="auxin-binding protein 1, cupin domain; Region: cupin_ABP1; cd02220" /db_xref="CDD:380349" misc_feature order(223..237,271..282,286..288,343..345,349..351, 355..357,379..381,385..387,427..429,433..438,442..456, 517..519,523..525,529..534) /gene="...
AA_position 160
XM_026022032.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346979 (LOC4346979), mRNA. (859 bp)
introns" /db_xref="GeneID:4346979" CDS 76..570 /gene="LOC4346979" /codon_start=1 /product="uncharacterized protein LOC4346979" /protein_id="XP_015610774.1" /db_xref="GeneID:4346979" /translation="MASSSLLRSAGGALRRWIPRRLFPSTSYRVWFGRRQSGYEQAFAESPRRRHLGSDCGGSTDDNQKRYSMDELLKCKRQLEKNKEGAFRPADIPDHESKKDELYRKMRSTFDKLCHCLDEQEHILREIEDQVDNDEKFDQVKQYLVAIPSFVCIGLILDRMHMFG" ORIGIN //...
AA_position 99
XM_015755288.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group 26S proteasome regulatory subunit 6A homolog (LOC4331050), mRNA. (1634 bp)
of Tat binding protein; LOC_Os02g56000; Tat-binding protein homolog 1; 26S protease regulatory subunit 6A homolog" /codon_start=1 /product="26S proteasome regulatory subunit 6A homolog" /protein_id="NP_001388924.1" /db_xref="GeneID:4331050" /translation="MSSPPPMAVDDADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEE...
AA_position 45
Synonym: OsRPT5a; TBP-1; TBP1
NM_001401995.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352144 (LOC4352144), mRNA. (1302 bp)
codon_start=1 /product="uncharacterized protein LOC4352144" /protein_id="XP_015618673.1" /db_xref="GeneID:4352144" /translation="MGADRKSSSPAGKPAEAARAGSLLAGLPSRGNFVADSIASSMGGLPVYVCLHDTAPPEGQVIDTDTTNILIRSLQLSKQKNEAKDVGSRTPGESSKGKRSASRLLDGKNPSKRANTGSTAGSSAHGELGSVFSEQTLQSFTVEKLRILLKERGLSPKGKKDELIARLIESSE" misc_feature 288..464 /gene="LOC4352144" /note="Det1 complexing ubiquitin ligase; Region: DDA1; pfam10172" /db_xref="CDD:401980" misc_feature 414..>740 /gene="LOC4352144" /note="poly [ADP-ribose] polymerase; Provisional; Region: PLN03124" /db_xref="CDD:215591" misc_feature 633..731 /gene="...
AA_position 166
XM_015763187.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4330520 (LOC4330520), mRNA. (1191 bp)
Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:4330520" CDS 278..829 /gene="LOC4330520" /codon_start=1 /product="uncharacterized protein LOC4330520" /protein_id="XP_015626789.1" /db_xref="GeneID:4330520" /translation="MATILENIQKARFLPTRPLKDELPTFQKESHLMGLRKRLSSFSDKIQPISSASAEWAFRRSKSAPSLGAFAGGPLKRWWDWGVGWLMSKKPGFATDLEMNEEEVAALGRGSRGSWGHILYKMRSGVRRLVTSHSLPTTHRSASAQCKPAATFNYTQSFHSGQTAMAY" ORIGIN //...
AA_position 20
XM_015771303.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4334723 (LOC4334723), transcript variant X1, mRNA. (1166 bp)
db_xref="GeneID:4334723" CDS 333..887 /gene="LOC4334723" /codon_start=1 /product="uncharacterized protein LOC4334723" /protein_id="XP_015628199.1" /db_xref="GeneID:4334723" /translation="MAALRYAARKICGRALQRPRVVYPAVTSPALEAERRLLPMLIRGEMPHISYTRHFSSSATPQPPLANNNKSISGHRLPCPNPAADAKVHNNIDPASLETLVQEKKDELFRLLLQMDLHNGSCEKSAEENKAILRLLRQFRAETRDNGTLSGADTKNLANRYVLPVSIILSGIIIVAQGHFISHL" ORIGIN //...
AA_position 105
XM_015772713.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group psbQ-like protein 3, chloroplastic (LOC4336434), mRNA. (915 bp)
codon_start=1 /product="psbQ-like protein 3, chloroplastic" /protein_id="XP_015636182.1" /db_xref="GeneID:4336434" /translation="MALQLAAQALSAILLSGAQPSSRRATPPGNGQRSRRPPATGRRRLAASLLASQLLLLPAAATSVAGAFEFDLRITVPEQSGEEAEAVVKLHARNLVRVKGLIDARSWRELQAALRSSAANLKQDLYAIIQASPASRRPELRRLYSDLFNSVTSLDYAARDKDELRVQEYYSNMITSLDEIFSKIM" misc_feature 209..760 /gene="LOC4336434" /note="PSII-Q subunit; Region: PLN02956" /db_xref="CDD:215515" ORIGIN //...
AA_position 161
XM_015780696.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group probable xyloglucan 6-xylosyltransferase 1 (LOC4332564), mRNA. (2145 bp)
PFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKMDYCRVHGLEIFYNMALLDAEMAGFWAKLPLLRALLLAHPEIEFLWWMDSDAMFSDMAFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPVRIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRYEEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGFTHKSLGSRKVKRIRNETSNPLDVKDELGLLHPAFKAMKTTST" misc_feature 510..1823 /gene="LOC4332564" /gene_synonym="OsJ_27597; OsXXT1; SRH2; XXT1" /note="xyloglucan 6-xylosyltransferase; Provisional; Region: PLN03182" /db_xref="CDD:215617" misc_feature 558..626 /gene="LOC4332564" /gene_synonym="OsJ_27597; OsXXT1; SRH2; XXT1" /note="...
AA_position 430
Synonym: OsJ_27597; OsXXT1; SRH2; XXT1
NM_001417595.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L9-like (LOC4327999), mRNA. (949 bp)
CDS 90..668 /gene="LOC4327999" /codon_start=1 /product="60S ribosomal protein L9-like" /protein_id="XP_015625200.1" /db_xref="GeneID:4327999" /translation="MKTILASETMEIPSGVTVHVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEVEGVRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITEDQ" misc_feature 90..665 /gene="LOC4327999" /note="60S ribosomal protein L6; Provisional; Region: PTZ00027" /db_xref="CDD:240234" ORIGIN //...
AA_position 142
XM_015769714.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group acyl transferase 7-like (LOC4337975), mRNA. (1895 bp)
EC_number="2.3.1.-" /note="LOC_Os05g08640" /codon_start=1 /product="acyl transferase 7" /protein_id="NP_001407147.1" /db_xref="GeneID:4337975" /translation="MAAAAPDKAVERLSQKLVHPSSPTPSAPLRLSWLDRYPTQMALIESLHVFKPDPARDAAGQGLAPARAIETALARALVEYYPLAGRLAVSRDSGELQVDCCGGAGGHGGVWFIEAAVPCRLEDVDYLEYPLAISKDELLPHPRPRPTRDEEDKLILLVQVTTFACGGFVVGFRFSHAVADGPGAAQFMGAVGELARGGERITVAPSWGRDAVPDPAGAMVGALPEPAGASRLEYLAIDISADYINHFKSQFAAATGGARCSAFEVLIAKAWQSRTRAAAFDPSTPINLSFAMNARPLLLPRGGAGFYGNCYYIMRVASTAGRVATASVTDVVRMIREGKKRLPSEFARWAAGEMAGVDPYQITSDYRTLLVSDWTRLGFAEVDYGWGPPGHVVPLTNLDYIATCILVKPWAHKPGARLITQCVTPDRVTAFHDAMVDIN"...
AA_position 135
Synonym: AT7; OsAT7
NM_001420218.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group IAA-amino acid hydrolase ILR1-like 8 (LOC4342839), mRNA. (1636 bp)
codon_start=1 /product="iAA-amino acid hydrolase ILR1-like 8" /protein_id="NP_001409004.1" /db_xref="GeneID:4342839" /translation="MLTSMAPPNASARLLLLVVVLFAHLPTTTTAASPALKALGEDLLAAAGAAGFAGWLSGLRRRIHQRPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESASLGGTFRSMTDEGLAYLMKRIREIIEAQAGVNRCAAAVDFLEEELRPYPATVNDDGMYGHAKAVAEAMLGEANVRVAARSMGGEDFAFYARRSPGAFFFIGVGNETTMGPAAAVRPVHSPHFVLDERALPVGAALHAAVAIEYLNKHDCS" misc_feature 260..1405 /...
AA_position 169
Synonym: ILL8
NM_001422075.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group auxin-binding protein 4 (LOC4352396), mRNA. (1778 bp)
auxin-binding protein 4" /protein_id="XP_015620272.1" /db_xref="GeneID:4352396" /translation="METRTGPTAAGGHGAHLAGAGRGALLLALVVVSAAAFLPVAESSCPRDNSLVKDVSKMYQSNYGREGFSHITIAGALAHGMKEVEVWLQTFGPGQRTPIHRHSCEEVFVVLKGKGTLLLGSSSMKYPGQPQEIPVFQNSTFSVPVNDPHQVWNSDEHEDLQVLVIISRPPVKIFTYDDWSVPHTAAKLKFPYFWDEDCLPAPKDEL" misc_feature 1041..1493 /gene="LOC4352396" /note="auxin-binding protein 1, cupin domain; Region: cupin_ABP1; cd02220" /db_xref="CDD:380349" misc_feature order...
AA_position 203
XM_015764786.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein IQ-DOMAIN 1 (LOC4327410), mRNA. (2108 bp)
P0460C04.27-1; putative SF16 protein" /codon_start=1 /product="protein IQ-DOMAIN 1" /protein_id="NP_001396016.1" /db_xref="GeneID:4327410" /translation="MGKKGNWFSAVKKVFSSSDPDGREAKIEKADKSRSRRKWPFGKSKKSDPWTSTVAVPTSTAPPPQTHPIQPQPEEIKDVKAVETDSEQNKHAYSVALASAVAAEAAAVAAQAAAEVVRLTTATTAVPKSPVSSKDELAAIKIQTAFRGYLARRALRALRGLVRLKSLVDGNAVKRQTAHTLHCTQTMTRVQTQIYSRRVKMEEEKQALQRQLQLKHQRELEKMKIDEDWDHSHQSKEQVETSLMMKQEAALRRERALAYAFSHQWKNSGRTITPTFTDQGNPNWGWSWMERWMTSRPWESRVISDKDPKDHYSTKNPSTSASRTYVPRAISIQRPATPNKSSRPPSRQSPSTPPSRVPSVTGKIRPASPRDSWLYKEDDLRSITSIRSERPRRQSTGGASVRDDASLTSTPALPSYMQSTESARAKSRYRSLLTDRFEVPERVPLVH...
AA_position 140
NM_001409087.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group MADS-box transcription factor 30-like (LOC4341786), transcript variant X14, mRNA. (1253 bp)
LOC4341786" /codon_start=1 /product="MADS-box transcription factor 30 isoform X7" /protein_id="XP_025882177.1" /db_xref="GeneID:4341786" /translation="MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMNVITIMILAAMISITHARIALDDCMQLGYIVIKQENSWRFWFI" misc_feature 227..439 /gene="LOC4341786" /note="MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS...
AA_position 143
XM_026026392.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339869 (LOC4339869), mRNA. (1404 bp)
by RNAseq alignments, including 107 samples with support for all annotated introns" /db_xref="GeneID:4339869" CDS 417..1064 /gene="LOC4339869" /codon_start=1 /product="uncharacterized protein LOC4339869" /protein_id="XP_015640973.1" /db_xref="GeneID:4339869" /translation="MDKAGGNQGGKVLKKGKKKHAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKRQQKREEQQRLDDEGAAIAEAVALHVLIDEDSEEPCHLMLNNLRICNHWEDFVGFGFAPDSQGVDAYPSGKPTSVSHAYVPQLRWTNWGMSQTFSSWEQLTDCEAPLYQEALAQSDIHPGPIAIVSPLQKRREDPFTIQGEAVAAASSATESESGQWNQQ" ORIGIN //...
AA_position 22
XM_015785487.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group probable plastid-lipid-associated protein 11, chloroplastic (LOC4336599), transcript variant X6, mRNA. (2234 bp)
support for all annotated introns" /db_xref="GeneID:4336599" CDS 43..708 /gene="LOC4336599" /codon_start=1 /product="probable plastid-lipid-associated protein 11, chloroplastic" /protein_id="XP_015633746.1" /db_xref="GeneID:4336599" /translation="MAPLVSHAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDELLRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEHEQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNFRFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG" misc_feature 181..678 /gene="LOC4336599" /note="Region: PAP_fibrillin; pfam04755" /db_xref="CDD:309752" ORIGIN //...
AA_position 47
XM_015778260.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group probable plastid-lipid-associated protein 11, chloroplastic (LOC4336599), transcript variant X5, mRNA. (2231 bp)
support for all annotated introns" /db_xref="GeneID:4336599" CDS 43..708 /gene="LOC4336599" /codon_start=1 /product="probable plastid-lipid-associated protein 11, chloroplastic" /protein_id="XP_015633745.1" /db_xref="GeneID:4336599" /translation="MAPLVSHAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDELLRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEHEQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNFRFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG" misc_feature 181..678 /gene="LOC4336599" /note="Region: PAP_fibrillin; pfam04755" /db_xref="CDD:309752" ORIGIN //...
AA_position 47
XM_015778259.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group probable plastid-lipid-associated protein 11, chloroplastic (LOC4336599), transcript variant X4, mRNA. (2286 bp)
support for all annotated introns" /db_xref="GeneID:4336599" CDS 43..708 /gene="LOC4336599" /codon_start=1 /product="probable plastid-lipid-associated protein 11, chloroplastic" /protein_id="XP_015633744.1" /db_xref="GeneID:4336599" /translation="MAPLVSHAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDELLRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEHEQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNFRFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG" misc_feature 181..678 /gene="LOC4336599" /note="Region: PAP_fibrillin; pfam04755" /db_xref="CDD:309752" ORIGIN //...
AA_position 47
XM_015778258.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group probable plastid-lipid-associated protein 11, chloroplastic (LOC4336599), transcript variant X3, mRNA. (1764 bp)
support for all annotated introns" /db_xref="GeneID:4336599" CDS 43..708 /gene="LOC4336599" /codon_start=1 /product="probable plastid-lipid-associated protein 11, chloroplastic" /protein_id="XP_015633743.1" /db_xref="GeneID:4336599" /translation="MAPLVSHAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDELLRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEHEQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNFRFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG" misc_feature 181..678 /gene="LOC4336599" /note="Region: PAP_fibrillin; pfam04755" /db_xref="CDD:309752" ORIGIN //...
AA_position 47
XM_015778257.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group probable plastid-lipid-associated protein 11, chloroplastic (LOC4336599), transcript variant X2, mRNA. (2884 bp)
support for all annotated introns" /db_xref="GeneID:4336599" CDS 43..708 /gene="LOC4336599" /codon_start=1 /product="probable plastid-lipid-associated protein 11, chloroplastic" /protein_id="XP_025880568.1" /db_xref="GeneID:4336599" /translation="MAPLVSHAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDELLRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEHEQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNFRFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG" misc_feature 181..678 /gene="LOC4336599" /note="Region: PAP_fibrillin; pfam04755" /db_xref="CDD:309752" ORIGIN //...
AA_position 47
XM_026024783.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group probable plastid-lipid-associated protein 11, chloroplastic (LOC4336599), transcript variant X1, mRNA. (2371 bp)
support for all annotated introns" /db_xref="GeneID:4336599" CDS 43..708 /gene="LOC4336599" /codon_start=1 /product="probable plastid-lipid-associated protein 11, chloroplastic" /protein_id="XP_015633742.1" /db_xref="GeneID:4336599" /translation="MAPLVSHAKILAPIPRGNRRLAPAPPAAGGFLRALFPSRRSRPPPEKDELLRLIADQRRGLDTQSDPSRLADIVSCIDALAAAAPGSDTVSDADKLSGTWRLLWTTEHEQLFIVRNAPFFRTAAGDVFQVIDVPGGALNNVITFPPSGAFVVNGSIEIQPPQRVNFRFTRAMLRGSNWEVPFPPFGKGWFDTVYLDDDIRVAKDIRGDYLVVERAPYSWNG" misc_feature 181..678 /gene="LOC4336599" /note="Region: PAP_fibrillin; pfam04755" /db_xref="CDD:309752" ORIGIN //...
AA_position 47
XM_015778256.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328003 (LOC4328003), mRNA. (1485 bp)
by RNAseq alignments, including 112 samples with support for all annotated introns" /db_xref="GeneID:4328003" CDS 577..1248 /gene="LOC4328003" /codon_start=1 /product="uncharacterized protein LOC4328003" /protein_id="XP_015625204.1" /db_xref="GeneID:4328003" /translation="MEKAAANQAGKVLKKGKKKQAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKKQKKREEQQRLDEEGAAIAEAVALHVLIGEDSDEPCHLMLNKHRRCNHWDHSAGFDFAVDAQGADIYPPDGLIQCADHVYAPKGRCIDWGIGQPLPSWGEVKDLQLQAPCYQGMFHQSVACPGFIAAQAVSSLQIGGDSSDITSPSQGATVVNRMLGATNRLNLYREI" ORIGIN //...
AA_position 22
XM_015769718.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group probable monogalactosyldiacylglycerol synthase 2, chloroplastic (LOC4345212), mRNA; nuclear gene for chloroplast product. (1946 bp)
xref="GeneID:4345212" /translation="MVISVATPRRSIRDAVLGGVLGAGGRQLYQPLRCAFYDGAAGGGLTAALSEDGAEGGVPLPCGRKTAAAKNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVFVRDLGKEYGGWPLNDMERSYKFMIRHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEVVAGIMRYNPDIIISVHPLMQHIPLWVLKWQSLHPKVPFVTVITDLNTCHPTWFHHGVTRCYCPSAEVAKRALLRGLEPSQIRVYGLPIRPSFCRAVLDKDELRKELDMDPDLPAVLLMGGGEGMGPVEETARALSDELYDPVGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFEKQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKDPREAARQVARWFTTHTNELRRYSLNALKLAQPEAVFDIVKDIHKLQQQPATVTRIPYSLTSSFSYSI" transit_peptide 119..244 /gene="LOC4345212" /gene_synonym="MGD2; OsJ_025729; OsMGD2" /note="...
AA_position 262
Synonym: MGD2; OsJ_025729; OsMGD2
NM_001417276.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI

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Redirect URI : http://ggrna.dbcls.jp/os/aa%3aKDEL
lang : en | div : | spe : os | query_string : aa:KDEL | format : html | download :

0.000 | 0.000 | search_start;
0.200 | 0.200 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:KDEL)?source=Oryza sativa Japonica Group (Japanese rice)?to=0&format=json
0.373 | 0.173 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:KDEL)?source=Oryza sativa Japonica Group (Japanese rice)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.378 | 0.005 | cgi_end;

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]