LOCUS       NM_001422075            1636 bp    mRNA    linear   PLN 01-JUN-2023
DEFINITION  Oryza sativa Japonica Group IAA-amino acid hydrolase ILR1-like 8
            (LOC4342839), mRNA.
ACCESSION   NM_001422075 XM_015790315
VERSION     NM_001422075.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP014963.1, AK110647.1 and CI463809.1.
            
            On Jun 1, 2023 this sequence version replaced XM_015790315.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00008650,
                              SAMN02716058 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-472               AP014963.1         8331334-8331805     c
            473-574             AP014963.1         8329268-8329369     c
            575-1606            AK110647.1         2-1033
            1607-1636           CI463809.1         389-418
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="7"
                     /map="7"
     gene            1..1636
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /note="IAA-amino acid hydrolase ILR1-like 8"
                     /db_xref="GeneID:4342839"
     exon            1..472
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /inference="alignment:Splign:2.1.0"
     CDS             80..1426
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /EC_number="3.5.1.-"
                     /note="P0021G06.115; putative IAA amidohydrolase;
                     LOC_Os07g14600"
                     /codon_start=1
                     /product="iAA-amino acid hydrolase ILR1-like 8"
                     /protein_id="NP_001409004.1"
                     /db_xref="GeneID:4342839"
                     /translation="

MLTSMAPPNASARLLLLVAAAAAVVLFAHLPTTTTAASPALKALGEDLLAAAGAAGFAGWLSGLRRRIHQRPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESASLGGTFRSMTDEGLAYLMKRIREIIEAQAGVNRCAAAVDFLEEELRPYPATVNDDGMYGHAKAVAEAMLGEANVRVAARSMGGEDFAFYARRSPGAFFFIGVGNETTMGPAAAVRPVHSPHFVLDERALPVGAALHAAVAIEYLNKHDCS"

     misc_feature    260..1405
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /note="M20 Peptidase Indole-3-acetic acid amino acid
                     hydrolase; Region: M20_IAA_Hyd; cd08017"
                     /db_xref="CDD:349938"
     misc_feature    order(773..775,839..844,854..856,863..865,872..874,
                     923..943,953..958,962..964,980..988)
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:349938"
     exon            473..598
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /inference="alignment:Splign:2.1.0"
     exon            599..913
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /inference="alignment:Splign:2.1.0"
     exon            914..1042
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /inference="alignment:Splign:2.1.0"
     exon            1043..1636
                     /gene="LOC4342839"
                     /gene_synonym="ILL8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

atatcatacaattcaggtgaagcaaaccgtcactcacccactcactcgctgcagtttgttgcctactctgccggcttcgatgctcacctcgatggcgccgccgaatgcttctgctcgcctcctcctcctcgtcgccgccgccgccgccgtcgtcctgttcgcccacctccccacgacgacgaccgccgcctcgccggcgctgaaggcgctcggcgaggacctgctggccgcggcgggcgcggcggggttcgccgggtggctgtccgggctgcggcggcgcatccaccagcggcccgagctggcgttccaggaggtgcggacgagcgagctggtgcgcgccgagctggacgcgatcggcgtcccctacgcgtggcccgtcgcacggacgggggtcgtcgccaccatcgacggcggcgccggcgccggccccgtcgtcgcgctccgggccgacatggacgcgctcccgctgcaggagctcgtagactgggaattcaagagccaggagaaaggaaagatgcatgcctgtggacatgatgctcatgtgacaatgcttcttggagctgctaagctacttcaatctcggaaggatgaattgaagggcactatcaagctggtgttccagccagccgaagagggccacgccggggcgtaccacgtcctggaatcgggcctcctggacgacgtctccgtcatcttcggcctccacgtcatcccgaacctccccgtcggcgtcgtggcgtcccggccggggccgttcatgtcggcggcggcgcggtttgccgcgacgttcaccggcaagggcggccacgccggcgtcccccacgacgccgtggaccccgtcgtcgccgtctcctccgccgtcctcagtctccagcagctggtctcccgggagaccgaccctctcgaggctgctgtggtctctatcacaatactgaaaggaggtgatgcttacaatgtcattcctgaatctgcatcgctgggaggcaccttcaggagcatgactgatgaaggcctggcatatctgatgaagaggatcagagagatcatcgaagcccaggccggcgtgaaccgctgcgccgccgccgtcgacttcctggaggaggagctccggccgtacccggccaccgtgaacgacgacgggatgtacggccacgccaaggcggtggcggaggcgatgctcggcgaggccaacgtgagggtcgccgcccggagcatgggcggcgaggacttcgccttctacgcgcggcggtcgccgggggccttcttcttcatcggcgtcggcaacgagaccaccatggggcccgccgccgccgtccggccggtgcactcgccgcacttcgtcctcgacgagcgcgcgctgccggtcggggcggcgctccacgccgccgtcgcgatcgagtacctgaacaagcacgactgctcgtgaatctcgtgtgtgatccaattgaaatatacttcgtatcaagcaatcgatcgacctgtggtgaaaataattagaaaaagaaatgagtatttgtcatagcttgctggctagtgaatactatgtgtgtgatttattacggtatgtgatagtttgggcattttatattgaataaattttgctggcataaattaattaatttgcaaccgagtacgt

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