LOCUS       NM_001417441            2110 bp    mRNA    linear   PLN 04-MAR-2023
DEFINITION  Oryza sativa Japonica Group heptahelical transmembrane protein
            ADIPOR3-like (LOC4332161), mRNA.
ACCESSION   NM_001417441 XM_015777675
VERSION     NM_001417441.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CI624920.1, AP014959.1, CI304443.1, AK072709.1 and CI114753.1.
            
            On Mar 4, 2023 this sequence version replaced XM_015777675.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK072709.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN04585873, SAMN07627069
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-48                CI624920.1         3-50
            49-51               AP014959.1         7051283-7051285     c
            52-273              CI624920.1         54-275
            274-520             CI304443.1         1-247
            521-2018            AK072709.1         453-1950
            2019-2110           CI114753.1         359-450
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="3"
                     /map="3"
     gene            1..2110
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="heptahelical transmembrane protein ADIPOR3-like"
                     /db_xref="GeneID:4332161"
     exon            1..766
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    477..479
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="upstream in-frame stop codon"
     CDS             534..1745
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="LOC_Os03g13040; PAQR family protein ADIPOR3"
                     /codon_start=1
                     /product="heptahelical transmembrane protein ADIPOR3"
                     /protein_id="NP_001404370.1"
                     /db_xref="GeneID:4332161"
                     /translation="

MAAAAGEEVEAARWAEAEDERKEGLRRRRRYGLVEYRALPGYMRDNEYILRHYRCEWPLPQVLLSAFSIHNETLNVWTHLIGFFIFLVLTIYTATQVPNVVDLQSLQHLPDVLRNADLHKIQTELVACLPSLPHLSDLQKLKDELKSSWNSIEVLPSLSRWHLLELLSSCLPHRFTHSNETSLSVLQSMKEDIANMIAPQLIRPIPRWPFYAFLGGAMFCLLASSTCHLLSCHSRRLAYIMLRLDYAGIAALIATSFYPPVYYSFMCYPFFCNLYLSCITILGVATIAFSLLPVFQNPEFRTIRACLFFGMGASGVIPVIHKLILFWHQPEALHTTAYEVLMGLFYGIGALVYATRVPERWMPGKFDIAGHSHQLFHVLVVAGAYTHYHSGLVYLKWRDVQGC"

     misc_feature    753..815
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     misc_feature    1143..1697
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="Haemolysin-III related; Region: HlyIII; pfam03006"
                     /db_xref="CDD:427098"
     misc_feature    1161..1223
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     misc_feature    1272..1334
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     misc_feature    1356..1418
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     misc_feature    1452..1514
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     misc_feature    1527..1589
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     misc_feature    1656..1718
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10PI5.1);
                     transmembrane region"
     exon            767..1091
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /inference="alignment:Splign:2.1.0"
     exon            1092..2110
                     /gene="LOC4332161"
                     /gene_synonym="ADIPOR3; OJ1175C11.13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gtgatgaatcgctcgcaccctacccaacccaaccctccccgactcgccgctccacgccgcaggcccccgcgcgcgcagaggcgtaggcgagcgagcaaacgacacggcacgacagtacggcaccaaaccccaaccccaacaccggtcgcgctcgcgtcgcaccgccccggcagccaagagagagaagcccaggaaaggccaaggtgatcgacgagcgcacgcacgcacgcacgcggcgccgtcagaaggccagagcggggggagaggggaggaggggctaaatcggggagaggtctccgtcatctccgactcgcggcgcggccccctcgccgagaccgacgggccgacgcaaccgaggcgagccagcgatcgagcgggcggggggcaacgcgtacaaaaaaaccccctccccttcccttcccttccctctcggtcgcgtcgtcgcgtggtcggcgaatattcgagcggcaacggcataacaccattgtcgcccgggacgcgcgctctttctctctctctctctcttcctggcgatggcggcggcggcgggggaggaggtggaggcggcgcggtgggcggaggcggaggacgagaggaaggaggggctgcggcggcggcggaggtacgggcttgtggagtaccgggcgctgccgggctacatgcgggacaacgagtacatcctgcgccactaccgctgcgagtggccgctcccgcaggtgctcctctccgccttctccatccacaacgagaccctcaacgtctggacgcacttgataggatttttcatctttcttgttcttaccatatacaccgcaacacaagttccaaatgtagtagatcttcaaagtctgcagcatttacctgatgtgctgagaaacgctgatcttcataagattcagacagaacttgtggcatgccttccttcgttacctcacctttctgacttgcaaaagctgaaggatgaattgaaaagctcatggaattcaattgaggtgcttccatcattgtcccgttggcacctcttggagttactatcaagttgcttgccgcacagatttactcattccaatgaaaccagtctgtctgttcttcaaagcatgaaggaagatatagcaaacatgattgcgccacagttgattaggccaattccgagatggccattttatgccttcttgggaggagcaatgttttgccttcttgccagcagcacatgccatcttctctcctgccactcccgtcgccttgcatacattatgcttcgccttgattatgcaggcattgctgctcttatcgcaacatcattctaccctccagtatactattctttcatgtgctatccattcttttgcaacctgtatctcagctgcataactattttaggagtggcaactattgctttctctttactccctgttttccagaaccctgagtttcggaccatacgagcatgcctcttctttggcatgggtgcatccggcgtgatccctgtcattcacaaattgatcctcttttggcaccaaccagaggcattgcacactaccgcatatgaggttctgatgggccttttctatggcattggggcactggtgtatgcaactcgggtgcccgagcgctggatgcctggaaaatttgacattgctggtcatagccaccagctttttcatgtgttagttgttgctggagcatacacacactatcattctggactggtatacctcaagtggagagacgtgcaaggctgctagaaattatctgtgtgctcgtaggatgtggatagattgtaggtgccctgcttgtgtcccgaaaaagaggaccgctgattctctctcgtcttcagaaacaaaagatgactgttgttgttggccaaaagactagacctggtctgttgtaaaatgtaacggaggacttgctagtactgtgagatacaaattgataatgagtgatgatcggtacctgtaaactgtggtgtggtattggctgatttttcagggtgcaactcacttgataaatcaggccctattattcccagaaaataactattcagtgataccacagcccctgctgtgcatcttgtgccgctatttatcagcttgctcaagttcaatgcata

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