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Previous release (v1)
2024-11-21 21:52:16, GGRNA : RefSeq release 226 (Sep, 2024)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
misc_feature 638..979 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(773..775,818..820,860..862,872..874,926..928, 947..949,953..955) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site...
misc_feature 669..1010 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(804..806,849..851,891..893,903..905,957..959, 978..980,984..986) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site...
misc_feature 1074..1415 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1209..1211,1254..1256,1296..1298,1308..1310, 1362..1364,1383..1385,1389..1391) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface...
misc_feature 888..1040 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1041..1403 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...
misc_feature 459..848 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 879..1031 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1032..1394 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
misc_feature 498..782 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 810..962 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 963..1325 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
misc_feature 498..782 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 810..962 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 963..1325 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
misc_feature 331..720 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 751..903 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 904..1266 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
misc_feature 764..916 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 917..1279 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...
misc_feature 262..654 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 682..834 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 835..1197 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 310..702 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 730..882 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 883..1245 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 262..654 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 682..834 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 835..1197 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
LOCUS XM_006503483 8017 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus argonaute RISC catalytic subunit 4 (Ago4), transcript variant X4, mRNA. ACCESSION XM_006503483 VERSION XM_006503483.5 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus...gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD:460472" misc_feature 2923..4230 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing...
LOCUS XM_017320100 14553 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus argonaute RISC catalytic subunit 3 (Ago3), transcript variant X10, mRNA. ACCESSION XM_017320100 VERSION XM_017320100.2 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM...gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD:460472" misc_feature 405..1682 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing...
LOCUS XM_030253391 15836 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus argonaute RISC catalytic subunit 3 (Ago3), transcript variant X9, mRNA. ACCESSION XM_030253391 VERSION XM_030253391.2 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus...gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD:460472" misc_feature 1688..2965 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing...
LOCUS XM_030253390 15746 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus argonaute RISC catalytic subunit 3 (Ago3), transcript variant X8, mRNA. ACCESSION XM_030253390 VERSION XM_030253390.2 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus...gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD:460472" misc_feature 1598..2875 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing...
LOCUS XM_030253389 15824 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus argonaute RISC catalytic subunit 3 (Ago3), transcript variant X7, mRNA. ACCESSION XM_030253389 VERSION XM_030253389.2 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus...gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD:460472" misc_feature 1676..2953 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing...
Swiss-Prot (Q8CJF9.2); acetylation site" misc_feature 473..757 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 785..937 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 938..1300 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 2313..2456 /gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 2457..2810 /gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of...
PRMT5. /evidence=ECO:0000269|PubMed:19584108, ECO:0000269|PubMed:19918066; propagated from UniProtKB/Swiss-Prot (Q8CDG1.2); methylation site" misc_feature 1220..1363 /gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1364..1717 /gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of...
gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 1284..1427 /gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1428..1781 /gene="Piwil2" /gene_synonym="mili; Piwil1l" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of...
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/mm/Argonaute+%22PAZ+domain%22
lang : en |
div : |
spe : mm |
query_string : Argonaute "PAZ domain" |
format : html |
download :
0.000 | 0.000 | search_start;
0.366 | 0.366 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Mus musculus (house mouse)?to=0&format=json
0.379 | 0.013 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?source=Mus musculus (house mouse)?to=0&format=json
0.450 | 0.071 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?source=Mus musculus (house mouse)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.454 | 0.004 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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