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Previous release (v1)
2025-02-23 07:16:21, GGRNA : RefSeq release 228 (Jan, 2025)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
misc_feature 390..614 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 642..794 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 795..1157 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
NM_001389549.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 220..612 /gene="AGO1" /gene_synonym="EIF2C1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 640..792 /gene="AGO1" /gene_synonym="EIF2C1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 793..1155 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: EIF2C1
NM_001317212.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 109..498 /gene="AGO4" /gene_synonym="EIF2C4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 529..681 /gene="AGO4" /gene_synonym="EIF2C4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 682..1044 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: EIF2C4
NM_001396480.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 362..616 /gene="AGO4" /gene_synonym="EIF2C4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 647..799 /gene="AGO4" /gene_synonym="EIF2C4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 800..1162 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: EIF2C4
NM_001039276.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 442..696 /gene="AGO4" /gene_synonym="EIF2C4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 727..879 /gene="AGO4" /gene_synonym="EIF2C4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 880..1242 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: EIF2C4
NM_001396481.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 277..2844 /gene="AGO3" /gene_synonym="EIF2C3" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 1444..2721 /gene="AGO3" /gene_synonym="EIF2C3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the...; Region: Piwi_ago-like; cd04657" /db_xref="CDD:240015" misc_feature order...
Synonym: EIF2C3
NM_001030900.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 301..528 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 556..708 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 709..1071 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_046910120.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 301..528 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 556..708 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 709..1071 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_040673464.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 393..617 /gene="AGO1" /gene_synonym="EIF2C1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 645..797 /gene="AGO1" /gene_synonym="EIF2C1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 798..1160 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: EIF2C1
XM_046932028.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 393..617 /gene="AGO1" /gene_synonym="EIF2C1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 645..797 /gene="AGO1" /gene_synonym="EIF2C1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 798..1160 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: EIF2C1
XM_015297696.4 -
Gallus gallus (chicken) -
NCBI -
UCSC
LOCUS XR_006936981 7789 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus argonaute 3, RISC catalytic component (AGO3), transcript variant X2, misc_RNA. ACCESSION XR_006936981 VERSION XR_006936981.1 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated...
Synonym: EIF2C3
XR_006936981.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
LOCUS XR_006936982 11960 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus argonaute 3, RISC catalytic component (AGO3), transcript variant X3, misc_RNA. ACCESSION XR_006936982 VERSION XR_006936982.1 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated...
Synonym: EIF2C3
XR_006936982.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
LOCUS XR_006936980 11376 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus argonaute 3, RISC catalytic component (AGO3), transcript variant X1, misc_RNA. ACCESSION XR_006936980 VERSION XR_006936980.1 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated...
Synonym: EIF2C3
XR_006936980.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
LOCUS XR_001469914 7797 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus argonaute 3, RISC catalytic component (AGO3), transcript variant X2, misc_RNA. ACCESSION XR_001469914 VERSION XR_001469914.4 DBLINK BioProject: PRJNA698609 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated...
Synonym: EIF2C3
XR_001469914.4 -
Gallus gallus (chicken) -
NCBI -
UCSC
LOCUS XR_001469913 11965 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus argonaute 3, RISC catalytic component (AGO3), transcript variant X3, misc_RNA. ACCESSION XR_001469913 VERSION XR_001469913.4 DBLINK BioProject: PRJNA698609 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated...
Synonym: EIF2C3
XR_001469913.4 -
Gallus gallus (chicken) -
NCBI -
UCSC
LOCUS XR_005841611 11374 bp RNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus argonaute 3, RISC catalytic component (AGO3), transcript variant X1, misc_RNA. ACCESSION XR_005841611 VERSION XR_005841611.2 DBLINK BioProject: PRJNA698609 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated...
Synonym: EIF2C3
XR_005841611.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 88% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="CGNC:85722" /db_xref="GeneID:112532565" CDS 1..825 /gene="LOC112532565" /codon_start=1 /product="protein argonaute 2-like isoform X1" /protein_id="XP_040557113.1" /db_xref="GeneID:112532565" /db_xref="CGNC:85722" /translation="...
XM_040701179.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 40 long SRA reads, and 88% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="CGNC:86109" /db_xref="GeneID:112533470" CDS 1..999 /gene="LOC112533470" /codon_start=1 /product="protein argonaute 14 isoform X1" /protein_id="XP_025011102.3" /db_xref="GeneID:112533470" /db_xref="CGNC:86109" /translation="...
XM_025155334.3 -
Gallus gallus (chicken) -
NCBI -
UCSC
using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="CGNC:74964" /db_xref="GeneID:107051958" CDS 1..1227 /gene="LOC107051958" /codon_start=1 /product="protein argonaute 2-like" /protein_id="XP_046760007.1" /db_xref="GeneID:107051958" /db_xref="CGNC:74964" /translation="...
XM_046904051.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 912 /gene="TNRC6A" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 1510..1869 /gene="TNRC6A" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 2044..2550 /gene="TNRC6A" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 2623..3444 /gene="TNRC6A" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 3466..3741 /gene="TNRC6A" /note="RNA recognition motif (RRM) found in vertebrate GW182 autoantigen; Region: RRM...
XM_046927603.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 912 /gene="TNRC6A" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 1510..1869 /gene="TNRC6A" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 2044..2550 /gene="TNRC6A" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 2623..3444 /gene="TNRC6A" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 3466..3741 /gene="TNRC6A" /note="RNA recognition motif (RRM) found in vertebrate GW182 autoantigen; Region: RRM...
XM_046901005.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature <175..525 /gene="LOC107049165" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 859..1002 /gene="LOC107049165" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1003..1356 /gene="LOC107049165" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of retrotransposons in the...; Region: PAZ_piwi_like;...
XM_040689385.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature <3472..3990 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4015..4896 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 4882..5145 /gene="TNRC6C" /note...
XM_040686172.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature <3472..3990 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4015..4896 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 4882..5145 /gene="TNRC6C" /note...
XM_040649650.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2884..3216 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3223..3336 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature <3475..3993 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4018..4899 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 4885..5148 /gene="TNRC6C" /note...
XM_040686171.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2884..3216 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3223..3336 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature <3475..3993 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4018..4899 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 4885..5148 /gene="TNRC6C" /note...
XM_015295280.4 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3045..3377 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3384..3497 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3651..4328 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4353..5234 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5220..5483 /gene="TNRC6C" /note="...
XM_046929743.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3045..3377 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3384..3497 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3651..4328 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4353..5234 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5220..5483 /gene="TNRC6C" /note="...
XM_046902109.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3876..4208 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4215..4328 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 4482..5159 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 5184..6065 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 6051..6314 /gene="TNRC6C" /note="...
XM_046929746.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3856..4188 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4195..4308 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 4462..5139 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 5164..6045 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 6031..6294 /gene="TNRC6C" /note="...
XM_046929745.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3876..4208 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4215..4328 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 4482..5159 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 5184..6065 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 6051..6314 /gene="TNRC6C" /note="...
XM_046902112.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3856..4188 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4195..4308 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 4462..5139 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 5164..6045 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 6031..6294 /gene="TNRC6C" /note="...
XM_046902111.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3590..3922 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3929..4042 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 4196..4873 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4898..5779 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5765..6028 /gene="TNRC6C" /note="...
XM_046929744.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3590..3922 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3929..4042 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 4196..4873 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4898..5779 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5765..6028 /gene="TNRC6C" /note="...
XM_046902110.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 5038..5370 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 5377..5490 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 5644..6321 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 6346..7227 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 7213..7476 /gene="TNRC6C" /note="...
XM_046929747.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 5030..5362 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 5369..5482 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 5636..6313 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 6338..7219 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 7205..7468 /gene="TNRC6C" /note="...
XM_046902113.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3460..4140 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4165..5046 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5032..5295 /gene="TNRC6C" /note="...
XM_040686167.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3460..4140 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4165..5046 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5032..5295 /gene="TNRC6C" /note="...
XM_040649649.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2884..3216 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3223..3336 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3463..4143 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4168..5049 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5035..5298 /gene="TNRC6C" /note="...
XM_040686166.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2884..3216 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3223..3336 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3463..4143 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4168..5049 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5035..5298 /gene="TNRC6C" /note="...
XM_015295276.3 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3487..4164 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4189..5070 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5056..5319 /gene="TNRC6C" /note="...
XM_040686165.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3487..4164 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4189..5070 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5056..5319 /gene="TNRC6C" /note="...
XM_015295275.4 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2864..3196 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3203..3316 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3470..4147 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4172..5053 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5039..5302 /gene="TNRC6C" /note="...
XM_040686176.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3037..3369 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3376..3489 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3643..4320 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4345..5226 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5212..5475 /gene="TNRC6C" /note="...
XM_040686175.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2864..3196 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3203..3316 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3470..4147 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4172..5053 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5039..5302 /gene="TNRC6C" /note="...
XM_015295281.4 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 3037..3369 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3376..3489 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 3643..4320 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4345..5226 /gene="TNRC6C" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5212..5475 /gene="TNRC6C" /note="...
XM_040649653.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2403 /gene="TNRC6C" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature <3472..3990 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4015..4779 /gene="TNRC6C" /note="TNRC6-PABC...
XM_040686173.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2403 /gene="TNRC6C" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 2881..3213 /gene="TNRC6C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3220..3333 /gene="TNRC6C" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature <3472..3990 /gene="TNRC6C" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4015..4779 /gene="TNRC6C" /note="TNRC6-PABC...
XM_040649652.2 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2297 /gene="TNRC6B" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3339..3689 /gene="TNRC6B" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4641..5405 /gene="TNRC6B" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5535..5783 /gene="TNRC6B" /note="RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein (TNRC6B); Region: RRM_TNRC6B; cd12712" /db_xref="CDD:410111" polyA_site 19480 /gene="TNRC6B" /...
XM_046910039.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
misc_feature 2421 /gene="TNRC6B" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3406..3813 /gene="TNRC6B" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4816..5580 /gene="TNRC6B" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5710..5958 /gene="TNRC6B" /note="RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein (TNRC6B); Region: RRM_TNRC6B; cd12712" /db_xref="CDD:410111" polyA_site 19652 /gene="TNRC6B" /...
XM_046907653.1 -
Gallus gallus (chicken) -
NCBI -
UCSC
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/en/gg/Argonaute
lang : en |
div : |
spe : gg |
query_string : Argonaute |
format : html |
download :
0.000 | 0.000 | search_start;
0.076 | 0.076 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Gallus gallus (chicken)?to=0&format=json
0.172 | 0.097 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Gallus gallus (chicken)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.177 | 0.005 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]