GGRNA | Results

Matches are highlighted with green background. Overlapping matches are dark colored.

Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), mRNA. (4129 bp)

single sample supports all introns SAMN04111056, SAMN04111070 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..4129 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="2L" /map="2L" gene 1..4129 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog" /db_xref="GeneID:734630" /db_xref="Xenbase:XB-GENE-1006885" exon 1..105 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /inference="alignment:Splign:2.1.0" CDS 21..2675 /gene="ago4.L" /gene_synonym="ago4;...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
NM_001096105.1 - Xenopus laevis (African clawed frog) - NCBI

Xenopus tropicalis argonaute 2, RISC catalytic component (ago2), mRNA. (3687 bp)

single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3687 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="6" /map="6" gene 1..3687 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="argonaute 2, RISC catalytic component" /db_xref="GeneID:448205" /db_xref="Xenbase:XB-GENE-1001916" exon 1..260 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /inference="alignment:Splign:2.1.0" misc_feature 122..124 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="upstream in-frame stop...

Synonym: Argonaute2; eif2c2
NM_001004877.1 - Xenopus tropicalis (tropical clawed frog) - NCBI

Xenopus laevis argonaute 2, RISC catalytic component L homeolog (ago2.L), mRNA. (3298 bp)

all introns SAMD00012418, SAMD00012419 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3298 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="6L" /map="6L" gene 1..3298 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="argonaute 2, RISC catalytic component L homeolog" /db_xref="GeneID:446823" /db_xref="Xenbase:XB-GENE-1001922" misc_feature 140..142 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="upstream in-frame stop codon" CDS 263..2851 /gene="ago2.L" /gene_synonym="ago2; ago2....

Synonym: ago2; ago2.S; Argonaute2; eif2c1; eif2c2
NM_001093519.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Danio rerio argonaute RISC catalytic component 3b (ago3b), transcript variant X1, mRNA. (8017 bp)

CDS; ncRNA Annotation Date :: 08/15/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8017 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" gene 1..8017 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 282 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
XM_005159456.4 - Danio rerio (zebrafish) - NCBI - UCSC

Danio rerio argonaute RISC catalytic component 3b (ago3b), mRNA. (3062 bp)

c 2954-3062 BX005424.10 157442-157550 c FEATURES Location/Qualifiers source 1..3062 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" /map="19" gene 1..3062 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452" exon 1..498 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /inference="alignment:Splign:2.1.0" misc_feature 477..479 /gene="ago3b" /gene_synonym="ago3;...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
NM_001160028.1 - Danio rerio (zebrafish) - NCBI - UCSC

PREDICTED: Magallana gigas protein argonaute-2 (LOC105329532), transcript variant X6, mRNA. (2871 bp)

misc_feature 502..894 /gene="LOC105329532" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 922..1074 /gene="LOC105329532" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1075..1437 /gene="LOC105329532" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_066084865.1 - Magallana gigas (Pacific oyster) - NCBI

PREDICTED: Pocillopora verrucosa protein argonaute-2-like (LOC131778676), mRNA. (5796 bp)

misc_feature 260..652 /gene="LOC131778676" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 680..832 /gene="LOC131778676" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 836..1201 /gene="LOC131778676" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066166944.1 - Pocillopora verrucosa - NCBI

PREDICTED: Equus caballus argonaute RISC component 4 (AGO4), mRNA. (6610 bp)

misc_feature 316..705 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 736..888 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 889..1251 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023633515.1 - Equus caballus (horse) - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (15513 bp)

misc_feature 227..511 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 539..691 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 692..1054 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023633491.1 - Equus caballus (horse) - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 2 (AGO2), mRNA. (14656 bp)

misc_feature 392..616 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1159 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023649005.1 - Equus caballus (horse) - NCBI

PREDICTED: Tiliqua scincoides argonaute RISC catalytic component 2 (AGO2), mRNA. (6629 bp)

misc_feature 321..578 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 606..758 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 759..1121 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066625639.1 - Tiliqua scincoides - NCBI

PREDICTED: Labrus bergylta argonaute RISC catalytic component 2 (ago2), mRNA. (10546 bp)

misc_feature 892..1116 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1144..1296 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1297..1659 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_020648066.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Saccopteryx leptura argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (3860 bp)

misc_feature 426..680 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 711..863 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 864..1226 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066375849.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI

PREDICTED: Labrus bergylta argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (7018 bp)

misc_feature 256..645 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 676..828 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 829..1191 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_020655159.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Saccopteryx leptura argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (14091 bp)

misc_feature 249..473 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 501..653 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 654..1016 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066379576.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI

PREDICTED: Labrus bergylta argonaute RISC component 4 (ago4), transcript variant X1, mRNA. (7033 bp)

XM_020655158.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Molothrus aeneus argonaute RISC catalytic component 2 (AGO2), mRNA. (3208 bp)

misc_feature 420..644 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 672..824 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 825..1187 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066548500.1 - Molothrus aeneus (bronzed cowbird) - NCBI

PREDICTED: Hoplias malabaricus argonaute RISC component 1 (ago1), mRNA. (6896 bp)

misc_feature 171..563 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 591..743 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 744..1106 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066644111.1 - Hoplias malabaricus (trahira) - NCBI

PREDICTED: Saccopteryx bilineata argonaute RISC catalytic component 3 (AGO3), mRNA. (3272 bp)

misc_feature 544..828 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 856..1008 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1009..1371 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066269661.1 - Saccopteryx bilineata (greater sac-winged bat) - NCBI

PREDICTED: Tiliqua scincoides protein argonaute-1 (LOC136661710), mRNA. (2995 bp)

misc_feature 192..584 /gene="LOC136661710" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 612..764 /gene="LOC136661710" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 765..1127 /gene="LOC136661710" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066639086.1 - Tiliqua scincoides - NCBI

PREDICTED: Tiliqua scincoides argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (3185 bp)

misc_feature 393..677 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 705..857 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 858..1220 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066639083.1 - Tiliqua scincoides - NCBI

PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (16066 bp)

misc_feature 780..1064 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1092..1244 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1245..1607 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_023633487.1 - Equus caballus (horse) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC catalytic component 2 (AGO2), transcript variant X8, mRNA. (14458 bp)

misc_feature 276..500 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 528..680 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 681..1043 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_063643579.1 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Labrus bergylta argonaute RISC catalytic component 3a (ago3a), transcript variant X2, mRNA. (10430 bp)

misc_feature 365..649 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 677..829 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 830..1192 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_020633535.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Equus caballus argonaute RISC component 1 (AGO1), transcript variant X1, mRNA. (8609 bp)

misc_feature 244..636 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 664..816 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 817..1179 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_023633474.1 - Equus caballus (horse) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC catalytic component 2 (AGO2), transcript variant X6, mRNA. (14650 bp)

misc_feature 468..692 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 720..872 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 873..1235 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_063643578.1 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Saccopteryx bilineata argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (6755 bp)

misc_feature 235..489 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 520..672 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 673..1035 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066269664.1 - Saccopteryx bilineata (greater sac-winged bat) - NCBI

PREDICTED: Labrus bergylta argonaute RISC catalytic component 3b (ago3b), transcript variant X2, mRNA. (7455 bp)

misc_feature 703..987 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1015..1167 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1168..1530 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_020642259.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Saccopteryx leptura argonaute RISC catalytic component 3 (AGO3), mRNA. (3272 bp)

XM_066375874.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI

PREDICTED: Saccopteryx bilineata argonaute RISC component 4 (AGO4), transcript variant X3, mRNA. (6949 bp)

misc_feature 429..683 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 714..866 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 867..1229 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066269665.1 - Saccopteryx bilineata (greater sac-winged bat) - NCBI

PREDICTED: Labrus bergylta argonaute RISC catalytic component 3b (ago3b), transcript variant X1, mRNA. (7488 bp)

XM_020642258.3 - Labrus bergylta (ballan wrasse) - NCBI

PREDICTED: Saccopteryx bilineata argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (12102 bp)

misc_feature 252..476 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 504..656 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 657..1019 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066265603.1 - Saccopteryx bilineata (greater sac-winged bat) - NCBI

PREDICTED: Molothrus aeneus protein argonaute-3 (LOC136565832), mRNA. (4839 bp)

misc_feature 286..570 /gene="LOC136565832" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 598..750 /gene="LOC136565832" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 751..1113 /gene="LOC136565832" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066564663.1 - Molothrus aeneus (bronzed cowbird) - NCBI

PREDICTED: Magallana gigas protein argonaute-2 (LOC105321320), transcript variant X2, mRNA. (5968 bp)

misc_feature 389..781 /gene="LOC105321320" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 809..961 /gene="LOC105321320" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 962..1324 /gene="LOC105321320" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066083736.1 - Magallana gigas (Pacific oyster) - NCBI

PREDICTED: Saccopteryx leptura argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (3781 bp)

misc_feature 212..601 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 632..784 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 785..1147 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066375848.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI

PREDICTED: Tiliqua scincoides protein argonaute-4 (LOC136661708), transcript variant X2, mRNA. (6620 bp)

misc_feature 139..528 /gene="LOC136661708" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 559..711 /gene="LOC136661708" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 712..1074 /gene="LOC136661708" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066639082.1 - Tiliqua scincoides - NCBI

PREDICTED: Corythoichthys intestinalis argonaute RISC catalytic component 3b (ago3b), transcript variant X3, mRNA. (3039 bp)

misc_feature 763..1041 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1069..1221 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1222..1584 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_057828317.1 - Corythoichthys intestinalis (scribbled pipefish) - NCBI

PREDICTED: Hoplias malabaricus argonaute RISC catalytic component 2 (ago2), mRNA. (11088 bp)

misc_feature 498..722 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 750..902 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 903..1265 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066673598.1 - Hoplias malabaricus (trahira) - NCBI

PREDICTED: Tiliqua scincoides protein argonaute-4 (LOC136661708), transcript variant X1, mRNA. (6597 bp)

misc_feature 116..505 /gene="LOC136661708" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 536..688 /gene="LOC136661708" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 689..1051 /gene="LOC136661708" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_066639081.1 - Tiliqua scincoides - NCBI

PREDICTED: Symphalangus syndactylus protein argonaute-3 (LOC129468935), transcript variant X3, mRNA. (10061 bp)

misc_feature 242..526 /gene="LOC129468935" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 554..706 /gene="LOC129468935" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 707..1069 /gene="LOC129468935" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_063627905.1 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (12842 bp)

misc_feature 333..725 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 753..905 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 906..1268 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_063627903.1 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Eleutherodactylus coqui argonaute RISC catalytic component 3 (AGO3), mRNA. (4673 bp)

misc_feature 956..1240 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1268..1420 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1421..1783 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_066574986.1 - Eleutherodactylus coqui (Puerto Rican coqui) - NCBI

PREDICTED: Hoplias malabaricus argonaute RISC component 4 (ago4), transcript variant X3, mRNA. (5992 bp)

misc_feature 245..634 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 665..817 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 818..1180 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_066674321.1 - Hoplias malabaricus (trahira) - NCBI

PREDICTED: Hoplias malabaricus argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (6007 bp)

XM_066674320.1 - Hoplias malabaricus (trahira) - NCBI

PREDICTED: Branchiostoma lanceolatum protein argonaute-2-like (LOC136421635), mRNA. (3913 bp)

misc_feature 572..964 /gene="LOC136421635" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 992..1144 /gene="LOC136421635" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1145..1507 /gene="LOC136421635" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_066409101.1 - Branchiostoma lanceolatum (amphioxus) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC catalytic component 2 (AGO2), transcript variant X9, mRNA. (14558 bp)

misc_feature 376..600 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 628..780 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 781..1143 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_055287395.2 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (14558 bp)

XM_055287394.2 - Symphalangus syndactylus (siamang) - NCBI

PREDICTED: Hoplias malabaricus argonaute RISC component 4 (ago4), transcript variant X1, mRNA. (6025 bp)

XM_066674319.1 - Hoplias malabaricus (trahira) - NCBI

PREDICTED: Equus caballus argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (8598 bp)

misc_feature 242..634 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 662..814 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 815..1177 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_014737387.2 - Equus caballus (horse) - NCBI

PREDICTED: Symphalangus syndactylus argonaute RISC catalytic component 2 (AGO2), transcript variant X10, mRNA. (14544 bp)

misc_feature 362..586 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 614..766 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 767..1129 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_055287396.2 - Symphalangus syndactylus (siamang) - NCBI

Data Export:

Debug Info:

0.000 | 0.000 | search_start;
0.094 | 0.094 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.216 | 0.122 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.222 | 0.006 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

Summary:

Results:

Data Export:

Debug Info: