GGRNA | Results

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Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)

LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This...

XM_024651321.1 - Strongyloides ratti - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. (903 bp)

LOCUS XM_024650915 903 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. ACCESSION XM_024650915 VERSION XM_024650915.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT...

XM_024650915.1 - Strongyloides ratti - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain and Protein of unknown function DUF2650 family-containing protein (SRAE_2000036100), partial mRNA. (3513 bp)

misc_feature 1342..1638 /locus_tag="SRAE_2000036100" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1450..1452,1492..1494,1531..1533,1543..1545, 1594..1596,1615..1617,1621..1623) /locus_tag="SRAE_2000036100" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...

XM_024651181.1 - Strongyloides ratti - NCBI

Caenorhabditis elegans PAZ domain-containing protein (wago-10), mRNA. (3217 bp)

misc_feature 1097..1375 /gene="wago-10" /locus_tag="CELE_T22H9.3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1178..1180,1223..1225,1256..1258,1268..1270, 1322..1324,1343..1345,1349..1351) /gene="wago-10" /locus_tag="CELE_T22H9.3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /...

NM_070776.5 - Caenorhabditis elegans - NCBI - UCSC - WormBase

Penicillium maclennaniae uncharacterized protein (N7477_005031), partial mRNA. (2934 bp)

Penicillium maclennaniae" /mol_type="mRNA" /strain="IBT 15551" /culture_collection="IBT:15551" /db_xref="taxon:1343394" /chromosome="Unknown" gene 2934 /locus_tag="N7477_005031" /db_xref="GeneID:81656952" CDS 1..2934 /locus_tag="N7477_005031" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056823475.1" /db_xref="GeneID:81656952" /translation="...

XM_056966694.1 - Penicillium maclennaniae - NCBI

Penicillium maclennaniae uncharacterized protein (N7477_009952), partial mRNA. (3015 bp)

Penicillium maclennaniae" /mol_type="mRNA" /strain="IBT 15551" /culture_collection="IBT:15551" /db_xref="taxon:1343394" /chromosome="Unknown" gene 3015 /locus_tag="N7477_009952" /db_xref="GeneID:81661871" CDS 1..3015 /locus_tag="N7477_009952" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056818592.1" /db_xref="GeneID:81661871" /translation="...

XM_056971613.1 - Penicillium maclennaniae - NCBI

Penicillium taxi uncharacterized protein (N7495_007981), partial mRNA. (2913 bp)

taxi" /mol_type="mRNA" /strain="IBT 34144" /culture_collection="IBT:34144" /db_xref="taxon:168475" /chromosome="Unknown" gene 2913 /locus_tag="N7495_007981" /db_xref="GeneID:81862408" CDS 1..2913 /locus_tag="N7495_007981" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_057060175.1" /db_xref="GeneID:81862408" /translation="...

XM_057210632.1 - Penicillium taxi - NCBI

Penicillium hispanicum uncharacterized protein (N7459_001000), partial mRNA. (3027 bp)

hispanicum" /mol_type="mRNA" /strain="IBT 35686" /culture_collection="IBT:35686" /db_xref="taxon:1080232" /chromosome="Unknown" gene 3027 /locus_tag="N7459_001000" /db_xref="GeneID:81630437" CDS 1..3027 /locus_tag="N7459_001000" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056804465.1" /db_xref="GeneID:81630437" /translation="...

XM_056940185.1 - Penicillium hispanicum - NCBI

Penicillium diatomitis uncharacterized protein (N7539_006270), partial mRNA. (2625 bp)

Penicillium diatomitis" /mol_type="mRNA" /strain="IBT 30728" /culture_collection="IBT:30728" /db_xref="taxon:2819901" /chromosome="Unknown" gene 2625 /locus_tag="N7539_006270" /db_xref="GeneID:81626121" CDS 1..2625 /locus_tag="N7539_006270" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056788796.1" /db_xref="GeneID:81626121" /translation="...

XM_056935872.1 - Penicillium diatomitis - NCBI

Penicillium angulare uncharacterized protein (N7478_012833), partial mRNA. (3213 bp)

collection="IBT:27051" /type_material="culture from type material of Penicillium angulare" /db_xref="taxon:116970" /chromosome="Unknown" gene 3213 /locus_tag="N7478_012833" /db_xref="GeneID:81619290" CDS 1..3213 /locus_tag="N7478_012833" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056772405.1" /db_xref="GeneID:81619290" /translation="...

XM_056929043.1 - Penicillium angulare - NCBI

Penicillium hordei uncharacterized protein (N7537_011531), partial mRNA. (3255 bp)

hordei" /mol_type="mRNA" /strain="IBT 12815" /culture_collection="IBT:12815" /db_xref="taxon:40994" /chromosome="Unknown" gene 3255 /locus_tag="N7537_011531" /db_xref="GeneID:81592827" CDS 1..3255 /locus_tag="N7537_011531" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056747872.1" /db_xref="GeneID:81592827" /translation="...

XM_056902585.1 - Penicillium hordei - NCBI

Penicillium coprophilum uncharacterized protein (N7500_008234), partial mRNA. (3243 bp)

coprophilum" /mol_type="mRNA" /strain="IBT 35676" /culture_collection="IBT:35676" /db_xref="taxon:36646" /chromosome="Unknown" gene 3243 /locus_tag="N7500_008234" /db_xref="GeneID:81418550" CDS 1..3243 /locus_tag="N7500_008234" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056529750.1" /db_xref="GeneID:81418550" /translation="...

XM_056679378.1 - Penicillium coprophilum - NCBI

Penicillium crustosum uncharacterized protein (N7487_002733), partial mRNA. (3291 bp)

crustosum" /mol_type="mRNA" /strain="IBT 35664" /culture_collection="IBT:35664" /db_xref="taxon:36656" /chromosome="Unknown" gene 3291 /locus_tag="N7487_002733" /db_xref="GeneID:81560687" CDS 1..3291 /locus_tag="N7487_002733" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056735264.1" /db_xref="GeneID:81560687" /translation="...

XM_056870480.1 - Penicillium crustosum - NCBI

Penicillium concentricum uncharacterized protein (N7517_000684), partial mRNA. (3288 bp)

concentricum" /mol_type="mRNA" /strain="IBT 3081" /culture_collection="IBT:3081" /db_xref="taxon:293559" /chromosome="Unknown" gene 3288 /locus_tag="N7517_000684" /db_xref="GeneID:81457597" CDS 1..3288 /locus_tag="N7517_000684" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056582549.1" /db_xref="GeneID:81457597" /translation="...

XM_056718414.1 - Penicillium concentricum - NCBI

Penicillium verrucosum uncharacterized protein (N7516_002265), partial mRNA. (2901 bp)

Penicillium verrucosum" /mol_type="mRNA" /strain="IBT 35672" /culture_collection="IBT:35672" /db_xref="taxon:60171" /chromosome="Unknown" gene 2901 /locus_tag="N7516_002265" /db_xref="GeneID:81866762" CDS 1..2901 /locus_tag="N7516_002265" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_057076868.1" /db_xref="GeneID:81866762" /translation="...

XM_057214985.1 - Penicillium verrucosum - NCBI

Penicillium diatomitis uncharacterized protein (N7539_007949), partial mRNA. (2253 bp)

organism="Penicillium diatomitis" /mol_type="mRNA" /strain="IBT 30728" /culture_collection="IBT:30728" /db_xref="taxon:2819901" /chromosome="Unknown" gene 2253 /locus_tag="N7539_007949" /db_xref="GeneID:81627799" CDS 1..2253 /locus_tag="N7539_007949" /note="Argonaute linker 1 domain; N-terminal domain of argonaute; PAZ domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056787415.1" /db_xref="GeneID:81627799" /translation="...

XM_056937550.1 - Penicillium diatomitis - NCBI

Penicillium brevicompactum uncharacterized protein (N7506_005847), partial mRNA. (3279 bp)

brevicompactum" /mol_type="mRNA" /strain="IBT 35665" /culture_collection="IBT:35665" /db_xref="taxon:5074" /chromosome="Unknown" gene 3279 /locus_tag="N7506_005847" /db_xref="GeneID:81645395" CDS 1..3279 /locus_tag="N7506_005847" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056809474.1" /db_xref="GeneID:81645395" /translation="...

XM_056955140.1 - Penicillium brevicompactum - NCBI

Penicillium chrysogenum uncharacterized protein (N7489_009047), partial mRNA. (3267 bp)

chrysogenum" /mol_type="mRNA" /strain="IBT 35668" /culture_collection="IBT:35668" /db_xref="taxon:5076" /chromosome="Unknown" gene 3267 /locus_tag="N7489_009047" /db_xref="GeneID:81453979" CDS 1..3267 /locus_tag="N7489_009047" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056562419.1" /db_xref="GeneID:81453979" /translation="...

XM_056714797.1 - Penicillium chrysogenum - NCBI

Penicillium cosmopolitanum uncharacterized protein (N7509_004117), partial mRNA. (3114 bp)

cosmopolitanum" /mol_type="mRNA" /strain="IBT 29677" /culture_collection="IBT:29677" /db_xref="taxon:1131564" /chromosome="Unknown" gene 3114 /locus_tag="N7509_004117" /db_xref="GeneID:81367734" CDS 1..3114 /locus_tag="N7509_004117" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056491488.1" /db_xref="GeneID:81367734" /translation="...

XM_056628754.1 - Penicillium cosmopolitanum - NCBI

Penicillium hispanicum uncharacterized protein (N7459_009412), partial mRNA. (2832 bp)

Penicillium hispanicum" /mol_type="mRNA" /strain="IBT 35686" /culture_collection="IBT:35686" /db_xref="taxon:1080232" /chromosome="Unknown" gene 2832 /locus_tag="N7459_009412" /db_xref="GeneID:81638832" CDS 1..2832 /locus_tag="N7459_009412" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056795805.1" /db_xref="GeneID:81638832" /translation="...

XM_056948580.1 - Penicillium hispanicum - NCBI

Penicillium alfredii uncharacterized protein (NUU61_000236), partial mRNA. (3084 bp)

Penicillium alfredii" /mol_type="mRNA" /strain="IBT 34128" /culture_collection="IBT:34128" /db_xref="taxon:1506179" /chromosome="Unknown" gene 3084 /locus_tag="NUU61_000236" /db_xref="GeneID:81389988" CDS 1..3084 /locus_tag="NUU61_000236" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056515670.1" /db_xref="GeneID:81389988" /translation="...

XM_056650820.1 - Penicillium alfredii - NCBI

Penicillium canariense uncharacterized protein (N7482_003713), partial mRNA. (2868 bp)

Penicillium canariense" /mol_type="mRNA" /strain="IBT 26290" /culture_collection="IBT:26290" /db_xref="taxon:189055" /chromosome="Unknown" gene 2868 /locus_tag="N7482_003713" /db_xref="GeneID:81425014" CDS 1..2868 /locus_tag="N7482_003713" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056544580.1" /db_xref="GeneID:81425014" /translation="...

XM_056685838.1 - Penicillium canariense - NCBI

Penicillium citrinum uncharacterized protein (N7469_009085), partial mRNA. (3108 bp)

Penicillium citrinum" /mol_type="mRNA" /strain="IBT 23319" /culture_collection="IBT:23319" /db_xref="taxon:5077" /chromosome="Unknown" gene 3108 /locus_tag="N7469_009085" /db_xref="GeneID:81387170" CDS <1..3108 /locus_tag="N7469_009085" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056497768.1" /db_xref="GeneID:81387170" /translation="...

XM_056648003.1 - Penicillium citrinum - NCBI

Penicillium hordei uncharacterized protein (N7537_010186), partial mRNA. (3162 bp)

Penicillium hordei" /mol_type="mRNA" /strain="IBT 12815" /culture_collection="IBT:12815" /db_xref="taxon:40994" /chromosome="Unknown" gene 3162 /locus_tag="N7537_010186" /db_xref="GeneID:81591482" CDS 1..3162 /locus_tag="N7537_010186" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056749908.1" /db_xref="GeneID:81591482" /translation="...

XM_056901240.1 - Penicillium hordei - NCBI

Penicillium nucicola uncharacterized protein (N7511_003839), partial mRNA. (3132 bp)

Penicillium nucicola" /mol_type="mRNA" /strain="IBT 29836" /culture_collection="IBT:29836" /db_xref="taxon:1850975" /chromosome="Unknown" gene 3132 /locus_tag="N7511_003839" /db_xref="GeneID:81778026" CDS 1..3132 /locus_tag="N7511_003839" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056985154.1" /db_xref="GeneID:81778026" /translation="...

XM_057126264.1 - Penicillium nucicola - NCBI

Penicillium nucicola uncharacterized protein (N7511_005108), partial mRNA. (3159 bp)

Penicillium nucicola" /mol_type="mRNA" /strain="IBT 29836" /culture_collection="IBT:29836" /db_xref="taxon:1850975" /chromosome="Unknown" gene 3159 /locus_tag="N7511_005108" /db_xref="GeneID:81779248" CDS 1..3159 /locus_tag="N7511_005108" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056984002.1" /db_xref="GeneID:81779248" /translation="...

XM_057127485.1 - Penicillium nucicola - NCBI

Penicillium coprophilum uncharacterized protein (N7500_002501), partial mRNA. (2922 bp)

Penicillium coprophilum" /mol_type="mRNA" /strain="IBT 35676" /culture_collection="IBT:35676" /db_xref="taxon:36646" /chromosome="Unknown" gene 2922 /locus_tag="N7500_002501" /db_xref="GeneID:81412819" CDS 1..2922 /locus_tag="N7500_002501" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056534172.1" /db_xref="GeneID:81412819" /translation="...

XM_056673647.1 - Penicillium coprophilum - NCBI

Penicillium bovifimosum uncharacterized protein (N7515_003308), partial mRNA. (2934 bp)

Penicillium bovifimosum" /mol_type="mRNA" /strain="IBT 22155" /culture_collection="IBT:22155" /db_xref="taxon:126998" /chromosome="Unknown" gene 2934 /locus_tag="N7515_003308" /db_xref="GeneID:81403222" CDS 1..2934 /locus_tag="N7515_003308" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056523109.1" /db_xref="GeneID:81403222" /translation="...

XM_056664052.1 - Penicillium bovifimosum - NCBI

Penicillium concentricum uncharacterized protein (N7517_003831), partial mRNA. (3264 bp)

Penicillium concentricum" /mol_type="mRNA" /strain="IBT 3081" /culture_collection="IBT:3081" /db_xref="taxon:293559" /chromosome="Unknown" gene 3264 /locus_tag="N7517_003831" /db_xref="GeneID:81460744" CDS 1..3264 /locus_tag="N7517_003831" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056577811.1" /db_xref="GeneID:81460744" /translation="...

XM_056721561.1 - Penicillium concentricum - NCBI

Penicillium concentricum uncharacterized protein (N7517_006737), partial mRNA. (2928 bp)

Penicillium concentricum" /mol_type="mRNA" /strain="IBT 3081" /culture_collection="IBT:3081" /db_xref="taxon:293559" /chromosome="Unknown" gene 2928 /locus_tag="N7517_006737" /db_xref="GeneID:81463650" CDS 1..2928 /locus_tag="N7517_006737" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056580717.1" /db_xref="GeneID:81463650" /translation="...

XM_056724467.1 - Penicillium concentricum - NCBI

Penicillium psychrosexuale uncharacterized protein (N7518_010197), partial mRNA. (2901 bp)

psychrosexuale" /mol_type="mRNA" /strain="IBT 29551" /culture_collection="IBT:29551" /db_xref="taxon:1002107" /chromosome="Unknown" gene 2901 /locus_tag="N7518_010197" /db_xref="GeneID:81842897" CDS 1..2901 /locus_tag="N7518_010197" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_057037259.1" /db_xref="GeneID:81842897" /translation="...

XM_057191123.1 - Penicillium psychrosexuale - NCBI

Penicillium verhagenii uncharacterized protein (N7466_002053), partial mRNA. (3201 bp)

Penicillium verhagenii" /mol_type="mRNA" /strain="IBT 33310" /culture_collection="IBT:33310" /db_xref="taxon:1562060" /chromosome="Unknown" gene 3201 /locus_tag="N7466_002053" /db_xref="GeneID:81813219" CDS 1..3201 /locus_tag="N7466_002053" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_057024736.1" /db_xref="GeneID:81813219" /translation="...

XM_057161451.1 - Penicillium verhagenii - NCBI

Penicillium coprophilum uncharacterized protein (N7500_009258), partial mRNA. (3198 bp)

Penicillium coprophilum" /mol_type="mRNA" /strain="IBT 35676" /culture_collection="IBT:35676" /db_xref="taxon:36646" /chromosome="Unknown" gene 3198 /locus_tag="N7500_009258" /db_xref="GeneID:81419571" CDS 1..3198 /locus_tag="N7500_009258" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056527781.1" /db_xref="GeneID:81419571" /translation="...

XM_056680399.1 - Penicillium coprophilum - NCBI

Penicillium chrysogenum uncharacterized protein (N7489_011595), partial mRNA. (2916 bp)

Penicillium chrysogenum" /mol_type="mRNA" /strain="IBT 35668" /culture_collection="IBT:35668" /db_xref="taxon:5076" /chromosome="Unknown" gene 2916 /locus_tag="N7489_011595" /db_xref="GeneID:81456526" CDS 1..2916 /locus_tag="N7489_011595" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056564966.1" /db_xref="GeneID:81456526" /translation="...

XM_056717344.1 - Penicillium chrysogenum - NCBI

Penicillium argentinense uncharacterized protein (N7532_010089), partial mRNA. (3270 bp)

Penicillium argentinense" /mol_type="mRNA" /strain="IBT 30761" /culture_collection="IBT:30761" /db_xref="taxon:1131581" /chromosome="Unknown" gene 3270 /locus_tag="N7532_010089" /db_xref="GeneID:81361559" CDS 1..3270 /locus_tag="N7532_010089" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056469996.1" /db_xref="GeneID:81361559" /translation="...

XM_056622580.1 - Penicillium argentinense - NCBI

Penicillium cosmopolitanum uncharacterized protein (N7509_008872), partial mRNA. (3186 bp)

cosmopolitanum" /mol_type="mRNA" /strain="IBT 29677" /culture_collection="IBT:29677" /db_xref="taxon:1131564" /chromosome="Unknown" gene 3186 /locus_tag="N7509_008872" /db_xref="GeneID:81372489" CDS 1..3186 /locus_tag="N7509_008872" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056484129.1" /db_xref="GeneID:81372489" /translation="...

XM_056633509.1 - Penicillium cosmopolitanum - NCBI

PREDICTED: Myotis brandtii protein argonaute-2-like (LOC106728082), mRNA. (1157 bp)

except=(pos:743..745,aa:OTHER) /product="LOW QUALITY PROTEIN: protein argonaute-2-like" /protein_id="XP_014404516.1" /db_xref="GeneID:106728082" /translation="MTCALGPQVELEVTLPGEGKDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASNQTXRLPRPVALPPGRGPVGTVTPGKRIQSVLKLAQGSQTSQWKEPGGSRQPPRCVEQGPLCPELGAEHAGSSGLLSLPQFLGVAPS" misc_feature 742 /gene="LOC106728082" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...

XM_014549030.1 - Myotis brandtii (Brandt's bat) - NCBI

Penicillium verhagenii uncharacterized protein (N7466_004371), partial mRNA. (2913 bp)

misc_feature 760..909 /locus_tag="N7466_004371" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature <976..1317 /locus_tag="N7466_004371" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...

XM_057163768.1 - Penicillium verhagenii - NCBI

Geosmithia morbida PAZ domain (GMORB2_2890), partial mRNA. (3108 bp)

misc_feature 490..732 /locus_tag="GMORB2_2890" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 772..921 /locus_tag="GMORB2_2890" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 925..1464 /locus_tag="GMORB2_2890" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like...

XM_035464866.1 - Geosmithia morbida - NCBI

Penicillium cataractarum uncharacterized protein (N7496_002505), partial mRNA. (2844 bp)

misc_feature 721..876 /locus_tag="N7496_002505" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature <928..1260 /locus_tag="N7496_002505" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...

XM_056695436.1 - Penicillium cataractarum - NCBI

Penicillium argentinense uncharacterized protein (N7532_011818), partial mRNA. (3432 bp)

Penicillium argentinense" /mol_type="mRNA" /strain="IBT 30761" /culture_collection="IBT:30761" /db_xref="taxon:1131581" /chromosome="Unknown" gene 3432 /locus_tag="N7532_011818" /db_xref="GeneID:81363288" CDS 1..3432 /locus_tag="N7532_011818" /note="Argonaute linker 1 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056469297.1" /db_xref="GeneID:81363288" /translation="...

XM_056624309.1 - Penicillium argentinense - NCBI

Penicillium brevicompactum uncharacterized protein (N7506_011362), partial mRNA. (3024 bp)

misc_feature 844..996 /locus_tag="N7506_011362" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature <1222..1422 /locus_tag="N7506_011362" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1261..1263,1303..1305,1315..1317,1372..1374, 1393..1395,1399..1401) /locus_tag...

XM_056960655.1 - Penicillium brevicompactum - NCBI

Penicillium angulare uncharacterized protein (N7478_006493), partial mRNA. (3180 bp)

misc_feature 982..1134 /locus_tag="N7478_006493" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature <1195..1548 /locus_tag="N7478_006493" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...

XM_056922707.1 - Penicillium angulare - NCBI

PREDICTED: Sorex cinereus argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (4538 bp)

misc_feature 140..481 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(275..277,320..322,362..364,374..376,428..430, 449..451,455..457) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 614..1891 /gene="AGO3" /note="PIWI...

XM_056122749.1 - Sorex cinereus (cinereus shrew) - NCBI

PREDICTED: Sorex cinereus argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (4564 bp)

misc_feature 166..507 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(301..303,346..348,388..390,400..402,454..456, 475..477,481..483) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 640..1917 /gene="AGO3" /note="PIWI...

XM_056122748.1 - Sorex cinereus (cinereus shrew) - NCBI

PREDICTED: Sorex cinereus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (4690 bp)

misc_feature 292..633 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(427..429,472..474,514..516,526..528,580..582, 601..603,607..609) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 766..2043 /gene="AGO3" /note="PIWI...

XM_056122747.1 - Sorex cinereus (cinereus shrew) - NCBI

PREDICTED: Sciurus carolinensis argonaute RISC catalytic component 3 (Ago3), mRNA. (6726 bp)

misc_feature <34..252 /gene="Ago3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(46..48,91..93,133..135,145..147,199..201,220..222, 226..228) /gene="Ago3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 385..1662 /gene="Ago3" /note="PIWI domain,...

XM_047556466.1 - Sciurus carolinensis (gray squirrel) - NCBI

PREDICTED: Bos mutus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (3045 bp)

misc_feature 430..771 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(565..567,610..612,652..654,664..666,718..720, 739..741,745..747) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 904..2181 /gene="AGO3" /note="PIWI...

XM_005892647.1 - Bos mutus (wild yak) - NCBI

Penicillium nucicola uncharacterized protein (N7511_010728), partial mRNA. (3126 bp)

nucicola" /mol_type="mRNA" /strain="IBT 29836" /culture_collection="IBT:29836" /db_xref="taxon:1850975" /chromosome="Unknown" gene 3126 /locus_tag="N7511_010728" /db_xref="GeneID:81784868" CDS 1..3126 /locus_tag="N7511_010728" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056981093.1" /db_xref="GeneID:81784868" /translation="...

XM_057133105.1 - Penicillium nucicola - NCBI

PREDICTED: Sorex cinereus argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (6624 bp)

misc_feature 183..524 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(318..320,363..365,405..407,417..419,471..473, 492..494,498..500) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 657..1934 /gene="AGO1" /note="PIWI...

XM_056122751.1 - Sorex cinereus (cinereus shrew) - NCBI

Data Export:

Debug Info:

0.000 | 0.000 | search_start;
0.363 | 0.363 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.656 | 0.294 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
1.682 | 1.026 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
1.690 | 0.008 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

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