GGRNA ver.2 Help | Advanced search | English    旧バージョン

2017-10-21 02:45:01, GGRNA : RefSeq release 84 (Sep, 2017)

Summary:

Results:

検索語に色がつきます重なると色が濃く表示されます。

Aspergillus fischeri NRRL 181 PAZ domain protein partial mRNA. (1410 bp)
misc_feature 109..525 /locus_tag="NFIA_024180" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 559..702 /locus_tag="NFIA_024180" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 754..1104 /locus_tag="NFIA_024180" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like...
XM_001263935.1 - Aspergillus fischeri NRRL 181 (Neosartorya fischeri NRRL 181) - NCBI
PREDICTED: Tetranychus urticae protein argonaute-2-like (LOC107367184), partial mRNA. (1201 bp)
misc_feature 226..687 /gene="LOC107367184" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 868..1200 /gene="LOC107367184" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1021..1023,1066..1068,1102..1104,1114..1116, 1168..1170,1186..1188) /gene="...
XM_015934897.1 - Tetranychus urticae (two-spotted spider mite) - NCBI
Brugia malayi PAZ domain containing protein partial mRNA. (1245 bp)
misc_feature 832..1170 /locus_tag="Bm1_18705" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(979..981,1024..1026,1051..1053,1063..1065, 1117..1119,1138..1140,1144..1146) /locus_tag="Bm1_18705" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" ORIGIN // REFERENCE...
XM_001895163.1 - Brugia malayi - NCBI
PREDICTED: Pan troglodytes argonaute 3, RISC catalytic component (AGO3), transcript variant X6, mRNA. (3100 bp)
misc_feature 503..844 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(638..640,683..685,725..727,737..739,791..793, 812..814,818..820) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 977..2254 /gene="AGO3" /note="Piwi_ago-...
XM_016959144.1 - Pan troglodytes (chimpanzee) - NCBI
PREDICTED: Pan troglodytes argonaute 3, RISC catalytic component (AGO3), transcript variant X7, mRNA. (3145 bp)
misc_feature 548..889 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(683..685,728..730,770..772,782..784,836..838, 857..859,863..865) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1022..2299 /gene="AGO3" /note="Piwi_ago-...
XM_016959152.1 - Pan troglodytes (chimpanzee) - NCBI
PREDICTED: Myotis davidii argonaute 4, RISC catalytic component (AGO4), transcript variant X2, mRNA. (2604 bp)
LOCUS XM_015572856 2604 bp mRNA linear MAM 09-FEB-2016 DEFINITION PREDICTED: Myotis davidii argonaute 4, RISC catalytic component (AGO4), transcript variant X2, mRNA. ACCESSION XM_015572856 VERSION XM_015572856.1 DBLINK BioProject: PRJNA232515 KEYWORDS RefSeq. SOURCE Myotis davidii ORGANISM Myotis...misc_feature 2072 /gene="AGO4" /note="Piwi_ago-like: PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of...; Region:...
XM_015572856.1 - Myotis davidii - NCBI
PREDICTED: Protobothrops mucrosquamatus protein argonaute-1 (LOC107294880), partial mRNA. (2059 bp)
misc_feature <17..286 /gene="LOC107294880" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 317..466 /gene="LOC107294880" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 467..829 /gene="LOC107294880" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015824147.1 - Protobothrops mucrosquamatus - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X5, mRNA. (3136 bp)
misc_feature 190..531 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(325..327,370..372,412..414,424..426,478..480, 499..501,505..507) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 664..1941 /gene="...
XM_016974870.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X3, mRNA. (3141 bp)
misc_feature 195..536 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(330..332,375..377,417..419,429..431,483..485, 504..506,510..512) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 669..1946 /gene="...
XM_016974869.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Myotis davidii argonaute 1, RISC catalytic component (AGO1), transcript variant X3, mRNA. (2505 bp)
misc_feature 316..732 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 763..912 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 913..1275 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_015572831.1 - Myotis davidii - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X5, mRNA. (3010 bp)
misc_feature 190..531 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(325..327,370..372,412..414,424..426,478..480, 499..501,505..507) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 664..1941 /gene="...
XM_016967521.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X3, mRNA. (3015 bp)
misc_feature 195..536 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(330..332,375..377,417..419,429..431,483..485, 504..506,510..512) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 669..1946 /gene="...
XM_016967520.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Pteropus alecto argonaute 3, RISC catalytic component (AGO3), transcript variant X6, mRNA. (2495 bp)
misc_feature 119..460 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(254..256,299..301,341..343,353..355,407..409, 428..430,434..436) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 593..1870 /gene="AGO3" /note="Piwi_ago-...
XM_015598969.1 - Pteropus alecto (black flying fox) - NCBI
PREDICTED: Macaca fascicularis argonaute 3, RISC catalytic component (AGO3), transcript variant X4, mRNA. (3387 bp)
misc_feature 503..844 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(638..640,683..685,725..727,737..739,791..793, 812..814,818..820) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 977..2254 /gene="AGO3" /note="Piwi_ago-...
XM_015438461.1 - Macaca fascicularis (crab-eating macaque) - NCBI
PREDICTED: Macaca fascicularis argonaute 3, RISC catalytic component (AGO3), transcript variant X9, mRNA. (3029 bp)
misc_feature 145..486 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(280..282,325..327,367..369,379..381,433..435, 454..456,460..462) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 619..1896 /gene="AGO3" /note="Piwi_ago-...
XM_015438475.1 - Macaca fascicularis (crab-eating macaque) - NCBI
PREDICTED: Macaca fascicularis argonaute 3, RISC catalytic component (AGO3), transcript variant X8, mRNA. (3077 bp)
misc_feature 193..534 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(328..330,373..375,415..417,427..429,481..483, 502..504,508..510) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 667..1944 /gene="AGO3" /note="Piwi_ago-...
XM_015438471.1 - Macaca fascicularis (crab-eating macaque) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X4, mRNA. (4508 bp)
misc_feature 1562..1903 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1697..1699,1742..1744,1784..1786,1796..1798, 1850..1852,1871..1873,1877..1879) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_007641614.2 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X2, mRNA. (4513 bp)
misc_feature 1567..1908 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1702..1704,1747..1749,1789..1791,1801..1803, 1855..1857,1876..1878,1882..1884) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_007641613.2 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Ornithorhynchus anatinus argonaute 2, RISC catalytic component (AGO2), transcript variant X1, mRNA. (2296 bp)
misc_feature 72..434 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 465..614 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 615..977 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_...
XM_007661244.2 - Ornithorhynchus anatinus (platypus) - NCBI
PREDICTED: Acropora digitifera protein argonaute-2-like (LOC107331491), transcript variant X4, mRNA. (2854 bp)
misc_feature 458..592 /gene="LOC107331491" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 599..946 /gene="LOC107331491" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(746..748,791..793,836..838,848..850,902..904, 920..922,926..928) /gene="LOC107331491" /note...
XM_015896084.1 - Acropora digitifera - NCBI
PREDICTED: Miniopterus natalensis argonaute 3, RISC catalytic component (AGO3), transcript variant X4, mRNA. (5285 bp)
misc_feature 419..760 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(554..556,599..601,641..643,653..655,707..709, 728..730,734..736) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 893..2170 /gene="AGO3" /note="Piwi_ago-...
XM_016218367.1 - Miniopterus natalensis - NCBI
PREDICTED: Miniopterus natalensis argonaute 3, RISC catalytic component (AGO3), transcript variant X5, mRNA. (4993 bp)
misc_feature 127..468 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(262..264,307..309,349..351,361..363,415..417, 436..438,442..444) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 601..1878 /gene="AGO3" /note="Piwi_ago-...
XM_016218371.1 - Miniopterus natalensis - NCBI
PREDICTED: Protobothrops mucrosquamatus argonaute 4, RISC catalytic component (AGO4), mRNA. (3017 bp)
misc_feature <81..344 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 378..527 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 528..890 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_015824155.1 - Protobothrops mucrosquamatus - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X4, mRNA. (4368 bp)
misc_feature 1548..1889 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1683..1685,1728..1730,1770..1772,1782..1784, 1836..1838,1857..1859,1863..1865) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_007618594.2 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X2, mRNA. (4373 bp)
misc_feature 1553..1894 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1688..1690,1733..1735,1775..1777,1787..1789, 1841..1843,1862..1864,1868..1870) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_007618593.2 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Ficedula albicollis argonaute 2, RISC catalytic component (AGO2), transcript variant X3, mRNA. (2994 bp)
misc_feature <70..111 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 112..474 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(268..270,313..315,355..357,367..369,421..423, 442..444,448..450) /gene="AGO2" /note="nucleic acid-binding...
XM_005042516.2 - Ficedula albicollis (collared flycatcher) - NCBI
PREDICTED: Miniopterus natalensis argonaute 3, RISC catalytic component (AGO3), transcript variant X7, mRNA. (6091 bp)
misc_feature 1225..1566 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1360..1362,1405..1407,1447..1449,1459..1461, 1513..1515,1534..1536,1540..1542) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1699..2976 /gene="...
XM_016218382.1 - Miniopterus natalensis - NCBI
PREDICTED: Miniopterus natalensis argonaute 3, RISC catalytic component (AGO3), transcript variant X6, mRNA. (6721 bp)
misc_feature 1855..2196 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1990..1992,2035..2037,2077..2079,2089..2091, 2143..2145,2164..2166,2170..2172) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 2329..3606 /gene="...
XM_016218374.1 - Miniopterus natalensis - NCBI
PREDICTED: Pan troglodytes argonaute 1, RISC catalytic component (AGO1), transcript variant X10, mRNA. (12271 bp)
misc_feature 185..334 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 335..697 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(491..493,536..538,578..580,590..592,644..646, 665..667,671..673) /gene="AGO1" /note="nucleic acid-binding...
XM_009453704.2 - Pan troglodytes (chimpanzee) - NCBI
PREDICTED: Python bivittatus argonaute 4, RISC catalytic component (AGO4), mRNA. (6810 bp)
misc_feature 190..444 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 475..627 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 628..990 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_007435169.1 - Python bivittatus (Burmese python) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute 3, RISC catalytic component (AGO3), transcript variant X8, mRNA. (5035 bp)
misc_feature 169..510 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(304..306,349..351,391..393,403..405,457..459, 478..480,484..486) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 643..1920 /gene="AGO3" /note="Piwi_ago-...
XM_016147245.1 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute 3, RISC catalytic component (AGO3), transcript variant X11, mRNA. (5004 bp)
misc_feature 138..479 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(273..275,318..320,360..362,372..374,426..428, 447..449,453..455) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 612..1889 /gene="AGO3" /note="Piwi_ago-...
XM_016147248.1 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute 3, RISC catalytic component (AGO3), transcript variant X10, mRNA. (5040 bp)
misc_feature 174..515 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(309..311,354..356,396..398,408..410,462..464, 483..485,489..491) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 648..1925 /gene="AGO3" /note="Piwi_ago-...
XM_016147247.1 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Pan troglodytes argonaute 1, RISC catalytic component (AGO1), transcript variant X9, mRNA. (12367 bp)
misc_feature 281..430 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 431..793 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(587..589,632..634,674..676,686..688,740..742, 761..763,767..769) /gene="AGO1" /note="nucleic acid-binding...
XM_009453699.2 - Pan troglodytes (chimpanzee) - NCBI
PREDICTED: Macaca fascicularis argonaute 3, RISC catalytic component (AGO3), transcript variant X6, mRNA. (3234 bp)
misc_feature 350..691 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(485..487,530..532,572..574,584..586,638..640, 659..661,665..667) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 824..2101 /gene="AGO3" /note="Piwi_ago-...
XM_005543986.2 - Macaca fascicularis (crab-eating macaque) - NCBI
PREDICTED: Macaca fascicularis argonaute 3, RISC catalytic component (AGO3), transcript variant X5, mRNA. (3282 bp)
misc_feature 398..739 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(533..535,578..580,620..622,632..634,686..688, 707..709,713..715) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 872..2149 /gene="AGO3" /note="Piwi_ago-...
XM_005543984.2 - Macaca fascicularis (crab-eating macaque) - NCBI
PREDICTED: Myotis davidii argonaute 2, RISC catalytic component (AGO2), mRNA. (3561 bp)
misc_feature 163..2736 /gene="AGO2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 172..588 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 619..768 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 769..1131 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015561416.1 - Myotis davidii - NCBI
PREDICTED: Acropora digitifera protein argonaute-2-like (LOC107331491), transcript variant X3, mRNA. (3294 bp)
misc_feature 1057..1395 /gene="LOC107331491" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1189..1191,1234..1236,1279..1281,1291..1293, 1345..1347,1363..1365,1369..1371) /gene="LOC107331491" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_015896083.1 - Acropora digitifera - NCBI
PREDICTED: Rousettus aegyptiacus argonaute 3, RISC catalytic component (AGO3), transcript variant X9, mRNA. (6345 bp)
misc_feature 1479..1820 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1614..1616,1659..1661,1701..1703,1713..1715, 1767..1769,1788..1790,1794..1796) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1953..3230 /gene="...
XM_016147246.1 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Erinaceus europaeus argonaute 3, RISC catalytic component (AGO3), mRNA. (3135 bp)
misc_feature 258..2702 /gene="AGO3" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 294..737 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 768..917 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 918..1280 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_007533105.2 - Erinaceus europaeus (western European hedgehog) - NCBI
PREDICTED: Erinaceus europaeus argonaute 2, RISC catalytic component (AGO2), mRNA. (3444 bp)
misc_feature 253..477 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 505..657 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 658..1020 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_007532053.1 - Erinaceus europaeus (western European hedgehog) - NCBI
PREDICTED: Macaca fascicularis argonaute 3, RISC catalytic component (AGO3), transcript variant X7, mRNA. (4064 bp)
misc_feature 1180..1521 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1315..1317,1360..1362,1402..1404,1414..1416, 1468..1470,1489..1491,1495..1497) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1654..2931 /gene="...
XM_005543987.2 - Macaca fascicularis (crab-eating macaque) - NCBI
PREDICTED: Pan troglodytes argonaute 3, RISC catalytic component (AGO3), transcript variant X4, mRNA. (3187 bp)
misc_feature 104..388 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 416..568 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 569..931 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_016959129.1 - Pan troglodytes (chimpanzee) - NCBI
PREDICTED: Poecilia reticulata protein argonaute-3-like (LOC103473053), mRNA. (2801 bp)
misc_feature 343..2517 /gene="LOC103473053" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 343..786 /gene="LOC103473053" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 817..966 /gene="LOC103473053" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 967..1329 /gene="LOC103473053" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_008422983.2 - Poecilia reticulata (guppy) - NCBI
PREDICTED: Pan troglodytes argonaute 3, RISC catalytic component (AGO3), transcript variant X5, mRNA. (3219 bp)
misc_feature 136..420 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 448..600 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 601..963 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_016959137.1 - Pan troglodytes (chimpanzee) - NCBI
PREDICTED: Acropora digitifera protein argonaute-2-like (LOC107331491), transcript variant X1, mRNA. (3338 bp)
misc_feature 1102..1440 /gene="LOC107331491" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1234..1236,1279..1281,1324..1326,1336..1338, 1390..1392,1408..1410,1414..1416) /gene="LOC107331491" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_015896081.1 - Acropora digitifera - NCBI
PREDICTED: Peromyscus maniculatus bairdii protein argonaute-4 (LOC102922378), mRNA. (2208 bp)
misc_feature 52..465 /gene="LOC102922378" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 499..648 /gene="LOC102922378" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 649..1011 /gene="LOC102922378" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015998639.1 - Peromyscus maniculatus bairdii (prairie deer mouse) - NCBI
PREDICTED: Peromyscus maniculatus bairdii argonaute 1, RISC catalytic component (Ago1), transcript variant X3, mRNA. (6950 bp)
misc_feature 204..356 /gene="Ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 357..719 /gene="Ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(513..515,558..560,600..602,612..614,666..668, 687..689,693..695) /gene="Ago1" /note="nucleic acid-binding...
XM_015998658.1 - Peromyscus maniculatus bairdii (prairie deer mouse) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-4 (LOC100762217), mRNA. (3772 bp)
misc_feature 209..463 /gene="LOC100762217" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 494..646 /gene="LOC100762217" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 647..1009 /gene="LOC100762217" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_016974867.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Protobothrops mucrosquamatus protein argonaute-3 (LOC107294752), mRNA. (2474 bp)
misc_feature <64..330 /gene="LOC107294752" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 361..510 /gene="LOC107294752" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 511..873 /gene="LOC107294752" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015824009.1 - Protobothrops mucrosquamatus - NCBI

Data Export:

下記より最大10000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/ja/Argonaute+%22PAZ+domain%22
lang : ja | div : | spe : | query_string : Argonaute "PAZ domain" | format : html | download :

0.000 | 0.000 | search_start;
0.104 | 0.104 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.130 | 0.025 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.309 | 0.180 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.318 | 0.009 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]