LOCUS       XM_024646477             846 bp    mRNA    linear   INV 10-APR-2018
DEFINITION  Strongyloides ratti Protein argonaute-2 (SRAE_0000056900), partial
            mRNA.
ACCESSION   XM_024646477
VERSION     XM_024646477.1
DBLINK      BioProject: PRJNA304930
            BioSample: SAMEA1682816
KEYWORDS    RefSeq.
SOURCE      Strongyloides ratti
  ORGANISM  Strongyloides ratti
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
            Strongyloides.
REFERENCE   1  (bases 1 to 846)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   2
  AUTHORS   Aslett,A.Martin.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2014) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge
            Cambridgeshire. CB10 1SA, United Kingdom
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_020171522).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Strongyloides ratti"
                     /mol_type="mRNA"
                     /strain="ED321 Heterogonic"
                     /db_xref="taxon:34506"
                     /chromosome="Unknown"
     gene            <1..>846
                     /locus_tag="SRAE_0000056900"
                     /db_xref="GeneID:36373813"
     CDS             1..846
                     /locus_tag="SRAE_0000056900"
                     /codon_start=1
                     /product="Protein argonaute-2"
                     /protein_id="XP_024500654.1"
                     /db_xref="GeneID:36373813"
                     /db_xref="InterPro:IPR003100"
                     /db_xref="UniProtKB/TrEMBL:A0A090KV99"
                     /translation="

MNSQLFFLSIVALEKKNVCRFALSKANELSGNFGNDKLFYAYDGVKNLITNHLLNIDEFVIEREKLGIQYKSIFKNGSVRIFFEKTTRYHEIDLSVYASYLIVTQQALNDKNAGGGGYVQLNGEKSLTESSSFLKYENLRIGLGRIIVGSFTENIKFTNIDEPCFVLSINASKNVYYKSELLDKIIKDEIFRRNVPRLLKDFNAEINDSNIKGVHFETVYRKNGDIIKFRHDLHNHSTIDTIIDMKDGSQKSFAEYFQNKFNIQLKYPVWPLFVYKIHVTN"

     misc_feature    565..828
                     /locus_tag="SRAE_0000056900"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
ORIGIN      

atgaatagtcaacttttttttttatcaattgtagcacttgagaaaaaaaatgtctgtagattcgccctaagtaaagctaatgaattaagtggtaattttggaaatgataaacttttctatgcttacgatggtgtgaagaatttaataacaaatcatcttttaaatattgatgaatttgtaattgaaagagaaaaattaggtatccaatacaaaagtattttcaaaaacggtagtgttagaattttttttgaaaaaaccacccgttatcacgagattgatctttccgtctatgctagttatttaattgttacacaacaagcattgaatgacaaaaatgctggaggaggtggatatgttcaattgaatggtgagaagtcattaactgaatcatcatcatttttgaaatatgaaaatttaaggataggtcttggtagaataatagttggtagttttacagaaaacatcaaatttacaaatattgatgaaccatgttttgtactttctattaatgcatctaaaaatgtgtactacaaatctgagcttcttgacaaaattattaaagatgaaatctttagaagaaatgtaccacgcttactaaaagattttaacgctgaaattaatgacagtaatattaaaggtgtccattttgaaacggtgtatagaaaaaatggtgatatcattaagtttcgtcatgatcttcataaccatagtacaatagatacaattattgatatgaaagatggttctcaaaaatcttttgctgaatattttcaaaataaatttaatatacaattaaaatatccagtatggccactttttgtttataaaattcacgttactaattaa

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