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2025-02-01 11:47:59, GGRNA : RefSeq release 227 (Nov, 2024)

Summary:

Results:

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Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), mRNA. (4129 bp)
single sample supports all introns SAMN04111056, SAMN04111070 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..4129 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="2L" /map="2L" gene 1..4129 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog" /db_xref="GeneID:734630" /db_xref="Xenbase:XB-GENE-1006885" exon 1..105 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /inference="alignment:Splign:2.1.0" CDS 21..2675 /gene="ago4.L" /gene_synonym="ago4;...
Synonym: ago4; argonaute-4; Argonaute4; eif2c4
NM_001096105.1 - Xenopus laevis (African clawed frog) - NCBI
PREDICTED: Danio rerio argonaute RISC catalytic component 3b (ago3b), transcript variant X1, mRNA. (8017 bp)
CDS; ncRNA Annotation Date :: 08/15/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8017 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" gene 1..8017 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 282 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq...
Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
XM_005159456.4 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio argonaute RISC catalytic component 3b (ago3b), mRNA. (3062 bp)
c 2954-3062 BX005424.10 157442-157550 c FEATURES Location/Qualifiers source 1..3062 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" /map="19" gene 1..3062 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452" exon 1..498 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /inference="alignment:Splign:2.1.0" misc_feature 477..479 /gene="ago3b" /gene_synonym="ago3;...
Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
NM_001160028.1 - Danio rerio (zebrafish) - NCBI - UCSC
Xenopus tropicalis argonaute 2, RISC catalytic component (ago2), mRNA. (3687 bp)
single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3687 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="6" /map="6" gene 1..3687 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="argonaute 2, RISC catalytic component" /db_xref="GeneID:448205" /db_xref="Xenbase:XB-GENE-1001916" exon 1..260 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /inference="alignment:Splign:2.1.0" misc_feature 122..124 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="upstream in-frame stop...
Synonym: Argonaute2; eif2c2
NM_001004877.1 - Xenopus tropicalis (tropical clawed frog) - NCBI
Xenopus laevis argonaute 2, RISC catalytic component L homeolog (ago2.L), mRNA. (3298 bp)
all introns SAMD00012418, SAMD00012419 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3298 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="6L" /map="6L" gene 1..3298 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="argonaute 2, RISC catalytic component L homeolog" /db_xref="GeneID:446823" /db_xref="Xenbase:XB-GENE-1001922" misc_feature 140..142 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="upstream in-frame stop codon" CDS 263..2851 /gene="ago2.L" /gene_synonym="ago2; ago2....
Synonym: ago2; ago2.S; Argonaute2; eif2c1; eif2c2
NM_001093519.1 - Xenopus laevis (African clawed frog) - NCBI
Apiospora hydei protein argonaute (PG997_013705), partial mRNA. (3150 bp)
collection="CBS:114990" /type_material="culture from type material of Arthrinium hydei" /db_xref="taxon:1337664" /chromosome="Unknown" gene 3150 /locus_tag="PG997_013705" /db_xref="GeneID:92051079" CDS <1..3150 /locus_tag="PG997_013705" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; consensus disorder prediction; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; PAZ domain profile.; PAZ_argonaute_like; Piwi domain; Piwi domain profile.; Piwi_ago-like" /codon_start=1 /product="protein argonaute" /protein_id="XP_066663711.1" /db_xref="GeneID:92051079" /...
XM_066818019.1 - Apiospora hydei - NCBI
PREDICTED: Channa argus argonaute RISC component 4 (ago4), transcript variant X8, mRNA. (2821 bp)
misc_feature 307..696 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 727..879 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 880..1242 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067496209.1 - Channa argus (northern snakehead) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC component 4 (ago4), transcript variant X6, mRNA. (5471 bp)
misc_feature 276..665 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 696..848 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 849..1211 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067612515.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC component 4 (ago4), transcript variant X5, mRNA. (5480 bp)
misc_feature 276..665 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 696..848 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 849..1211 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067612514.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Clytia hemisphaerica protein argonaute-2-like (LOC136807415), mRNA. (3934 bp)
misc_feature 771..1001 /gene="LOC136807415" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1029..1178 /gene="LOC136807415" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1179..1523 /gene="LOC136807415" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_067063999.1 - Clytia hemisphaerica - NCBI
PREDICTED: Thunnus thynnus argonaute RISC component 4 (ago4), transcript variant X4, mRNA. (5503 bp)
misc_feature 275..664 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 695..847 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 848..1210 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067612513.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC component 4 (ago4), transcript variant X3, mRNA. (5512 bp)
misc_feature 275..664 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 695..847 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 848..1210 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067612512.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (5519 bp)
misc_feature 276..665 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 696..848 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 849..1211 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067612511.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC component 4 (ago4), transcript variant X1, mRNA. (5528 bp)
misc_feature 276..665 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 696..848 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 849..1211 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067612510.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC component 4 (ago4), transcript variant X6, mRNA. (3258 bp)
misc_feature 224..613 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1159 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426678.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC component 4 (ago4), transcript variant X5, mRNA. (3275 bp)
misc_feature 224..613 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1159 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426677.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC component 4 (ago4), transcript variant X4, mRNA. (3291 bp)
misc_feature 224..613 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1159 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426676.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Alexandromys fortis protein argonaute-4 (LOC126509628), transcript variant X2, mRNA. (5023 bp)
misc_feature 461..850 /gene="LOC126509628" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 881..1033 /gene="LOC126509628" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1034..1396 /gene="LOC126509628" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_050155666.1 - Alexandromys fortis (reed vole) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC component 4 (ago4), transcript variant X3, mRNA. (3331 bp)
misc_feature 224..613 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1231 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426675.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (3349 bp)
misc_feature 224..613 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1231 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426674.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC component 4 (ago4), transcript variant X1, mRNA. (3364 bp)
misc_feature 224..613 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1231 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426673.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Magallana gigas protein argonaute-2 (LOC105329532), transcript variant X6, mRNA. (2871 bp)
misc_feature 502..894 /gene="LOC105329532" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 922..1074 /gene="LOC105329532" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1075..1437 /gene="LOC105329532" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_066084865.1 - Magallana gigas (Pacific oyster) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC catalytic component 3a (ago3a), transcript variant X5, mRNA. (8913 bp)
misc_feature 1044..1328 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1356..1508 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1509..1871 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067447819.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Acropora muricata protein argonaute-2-like (LOC136922841), transcript variant X3, mRNA. (2624 bp)
misc_feature <164..292 /gene="LOC136922841" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 320..472 /gene="LOC136922841" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 476..841 /gene="LOC136922841" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_067191175.1 - Acropora muricata - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC catalytic component 3a (ago3a), transcript variant X4, mRNA. (8934 bp)
misc_feature 1044..1328 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1356..1508 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1509..1871 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067447818.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC catalytic component 3a (ago3a), transcript variant X3, mRNA. (8939 bp)
misc_feature 1046..1330 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1358..1510 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1511..1873 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067447817.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC catalytic component 3a (ago3a), transcript variant X2, mRNA. (8942 bp)
misc_feature 1046..1330 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1358..1510 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1511..1873 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067447816.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Pocillopora verrucosa protein argonaute-2-like (LOC131778676), mRNA. (5796 bp)
misc_feature 260..652 /gene="LOC131778676" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 680..832 /gene="LOC131778676" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 836..1201 /gene="LOC131778676" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_066166944.1 - Pocillopora verrucosa - NCBI
PREDICTED: Equus caballus argonaute RISC component 4 (AGO4), mRNA. (6610 bp)
misc_feature 316..705 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 736..888 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 889..1251 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_023633515.1 - Equus caballus (horse) - NCBI
PREDICTED: Equus caballus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (15513 bp)
misc_feature 227..511 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 539..691 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 692..1054 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_023633491.1 - Equus caballus (horse) - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC catalytic component 3a (ago3a), transcript variant X1, mRNA. (8963 bp)
misc_feature 1046..1330 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1358..1510 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1511..1873 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067447815.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Equus caballus argonaute RISC catalytic component 2 (AGO2), mRNA. (14656 bp)
misc_feature 392..616 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 644..796 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 797..1159 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_023649005.1 - Equus caballus (horse) - NCBI
PREDICTED: Tiliqua scincoides argonaute RISC catalytic component 2 (AGO2), mRNA. (6629 bp)
misc_feature 321..578 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 606..758 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 759..1121 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_066625639.1 - Tiliqua scincoides - NCBI
PREDICTED: Pseudorasbora parva argonaute RISC catalytic component 2 (ago2), mRNA. (10236 bp)
misc_feature 512..736 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 764..916 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 917..1279 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067426506.1 - Pseudorasbora parva (stone moroko) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC catalytic component 2 (ago2), transcript variant X2, mRNA. (12578 bp)
misc_feature 730..954 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 982..1134 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1135..1497 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067611242.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC catalytic component 3a (ago3a), transcript variant X2, mRNA. (6930 bp)
misc_feature 1047..1331 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1359..1511 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1512..1874 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067600876.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Myxine glutinosa protein argonaute-1-like (LOC137421869), mRNA. (2529 bp)
misc_feature 244..462 /gene="LOC137421869" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 490..642 /gene="LOC137421869" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 643..999 /gene="LOC137421869" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_068108352.1 - Myxine glutinosa (Atlantic hagfish) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC catalytic component 3b (ago3b), transcript variant X2, mRNA. (8999 bp)
misc_feature 1424..1702 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1730..1882 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1883..2245 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067612376.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC catalytic component 2 (ago2), transcript variant X1, mRNA. (12593 bp)
misc_feature 745..969 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 997..1149 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1150..1512 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067611241.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Channa argus argonaute RISC component 4 (ago4), transcript variant X9, mRNA. (6530 bp)
misc_feature 165..419 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 450..602 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 603..965 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_067496220.1 - Channa argus (northern snakehead) - NCBI
PREDICTED: Labrus bergylta argonaute RISC catalytic component 2 (ago2), mRNA. (10546 bp)
misc_feature 892..1116 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1144..1296 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1297..1659 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_020648066.3 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC catalytic component 3a (ago3a), transcript variant X1, mRNA. (6952 bp)
misc_feature 1048..1332 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1360..1512 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1513..1875 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067600874.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Thunnus thynnus argonaute RISC catalytic component 3b (ago3b), transcript variant X1, mRNA. (9019 bp)
misc_feature 1423..1701 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1729..1881 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1882..2244 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_067612375.1 - Thunnus thynnus (Atlantic bluefin tuna) - NCBI
PREDICTED: Acropora muricata protein argonaute-2-like (LOC136922843), transcript variant X4, mRNA. (4266 bp)
misc_feature <311..454 /gene="LOC136922843" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 482..634 /gene="LOC136922843" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 638..1003 /gene="LOC136922843" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_067191187.1 - Acropora muricata - NCBI
PREDICTED: Acropora muricata protein argonaute-2-like (LOC136922841), transcript variant X2, mRNA. (2812 bp)
misc_feature <337..480 /gene="LOC136922841" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 508..660 /gene="LOC136922841" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 664..1029 /gene="LOC136922841" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_067191174.1 - Acropora muricata - NCBI
PREDICTED: Chanodichthys erythropterus argonaute RISC catalytic component 2 (ago2), mRNA. (7439 bp)
misc_feature 591..815 /gene="ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 843..995 /gene="ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 996..1358 /gene="ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_067411524.1 - Chanodichthys erythropterus (predatory carp) - NCBI
PREDICTED: Anolis sagrei protein argonaute-1 (LOC132780766), transcript variant X3, mRNA. (2783 bp)
misc_feature 148..372 /gene="LOC132780766" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 400..552 /gene="LOC132780766" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 553..915 /gene="LOC132780766" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_067473715.1 - Anolis sagrei (Brown anole) - NCBI
PREDICTED: Saccopteryx leptura argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (3860 bp)
misc_feature 426..680 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 711..863 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 864..1226 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_066375849.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI
PREDICTED: Labrus bergylta argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (7018 bp)
misc_feature 256..645 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 676..828 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 829..1191 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_020655159.3 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Saccopteryx leptura argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (14091 bp)
misc_feature 249..473 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 501..653 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 654..1016 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_066379576.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/Argonaute
lang : en | div : | spe : | query_string : Argonaute | format : html | download : 

0.000 | 0.000 | search_start;
0.091 | 0.091 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.229 | 0.137 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.235 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]