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2025-12-07 23:05:42, GGRNA : RefSeq release 232 (Sep, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Caloenas nicobarica homeobox B8 (HOXB8), transcript variant X1, mRNA. (1260 bp)
ataaaatgaacagtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattctctctctctctttctctctatctctctcttctttcctggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcacttttaaaaaattattttccacatttttttgttgtgctttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctctctttctctgtc
position 1207
XM_065651049.1 - Caloenas nicobarica (Nicobar pigeon) - NCBI
PREDICTED: Caloenas nicobarica homeobox B8 (HOXB8), transcript variant X2, mRNA. (1263 bp)
ataaaatgaacagtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattctctctctctctttctctctatctctctcttctttcctggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcacttttaaaaaattattttccacatttttttgttgtgctttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctctctttctctgtc
position 1210
XM_065651050.1 - Caloenas nicobarica (Nicobar pigeon) - NCBI
PREDICTED: Nyctibius grandis homeobox B8 (HOXB8), transcript variant X2, mRNA. (1265 bp)
atgaacagtatgcaaaagtggtcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattttctctctctctctgtctttctctctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctataggagtcacgtgaaattacatttgtgcaccttttatttttaattttccaccttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctctctttctctc
position 1214
XM_068418822.1 - Nyctibius grandis - NCBI
PREDICTED: Nyctibius grandis homeobox B8 (HOXB8), transcript variant X1, mRNA. (1268 bp)
atgaacagtatgcaaaagtggtcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattttctctctctctctgtctttctctctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctataggagtcacgtgaaattacatttgtgcaccttttatttttaattttccaccttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctctctttctctc
position 1217
XM_068418821.1 - Nyctibius grandis - NCBI
PREDICTED: Hipposideros armiger homeobox B8 (HOXB8), transcript variant X2, mRNA. (1270 bp)
cctcccaccgctgcgtccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccgggggaaagacaaggattgtaagcaaggactccctcgcttagcgagggtgagcggctgcagcttggctgagccccccaccccccgcccccgcccagtgtaaaaagcctccttgtgcaatggtctcttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctctctctctctctctctctctctctctc
position 1193
XM_019638725.1 - Hipposideros armiger (great roundleaf bat) - NCBI
PREDICTED: Hipposideros armiger homeobox B8 (HOXB8), transcript variant X1, mRNA. (1273 bp)
cctcccaccgctgcgtccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccgggggaaagacaaggattgtaagcaaggactccctcgcttagcgagggtgagcggctgcagcttggctgagccccccaccccccgcccccgcccagtgtaaaaagcctccttgtgcaatggtctcttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctctctctctctctctctctctctctctc
position 1196
XM_019638724.1 - Hipposideros armiger (great roundleaf bat) - NCBI
PREDICTED: Aptenodytes forsteri homeobox B8 (HOXB8), transcript variant X1, mRNA. (1281 bp)
atgaacagtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattctctctctctctctgtctttctctctgtctctctcttctgtcctggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcactttttttttttaattttccacctttttggttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgcaatagttatctctccctttctctctctttctc
position 1222
XM_009287747.1 - Aptenodytes forsteri (emperor penguin) - NCBI
PREDICTED: Pygoscelis adeliae homeobox B8 (HOXB8), transcript variant X2, mRNA. (1295 bp)
gaacagtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattctctctctctctctgtctttctctctgtctctctcttctgtccgggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcactttttttttttttaattttccacctttttggttgtgatttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctccctttctctctctttctctctttactttccata
position 1221
XM_009330146.1 - Pygoscelis adeliae (Adelie penguin) - NCBI
PREDICTED: Aptenodytes forsteri homeobox B8 (HOXB8), transcript variant X2, mRNA. (1319 bp)
atgaacagtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattctctctctctctctgtctttctctctgtctctctcttctgtcctggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcactttttttttttaattttccacctttttggttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgcaatagttatctctccctttctctctctttctc
position 1260
XM_009287748.2 - Aptenodytes forsteri (emperor penguin) - NCBI
PREDICTED: Pygoscelis adeliae homeobox B8 (HOXB8), transcript variant X1, mRNA. (1298 bp)
gaacagtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattctctctctctctctgtctttctctctgtctctctcttctgtccgggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcactttttttttttttaattttccacctttttggttgtgatttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctccctttctctctctttctctctttactttccata
position 1224
XM_009330145.1 - Pygoscelis adeliae (Adelie penguin) - NCBI
PREDICTED: Clinocottus analis homeobox protein Hox-B8a-like (LOC137799934), mRNA. (1335 bp)
tccatccgagtcaaaccaacatagtctactctagtgtttaaaacaaacaaaaaaaagaatagcttcctttctttgtggaacaattattgtggaaacatttctatattgttagaagtttatcattaacaattttatctttggcagctgtatagtttttaagttaaaaaatgatgatggtgcactttttactgtacttctcacttctatgttgttgttgttgttctggcaatgattgattgatgatgatgatgatgatgatgatgatgatgacgttgcaattaatgaaatttccaacaacatgaaactgcctatttatgccgttttagtaggtcgggtctcttttttacactctaattgttgttttagttcgttttttgatcgatggtgttttgttttatgttgtcttccctttttttcctctttttttggggtaaaaagcatgcgcacagtgcagataaaaaagagagaaagagagagcgagagagagaacattcataaaaataaaa
position 1120
XM_068596835.1 - Clinocottus analis (woolly sculpin) - NCBI
PREDICTED: Pseudophryne corroboree homeobox B8 (HOXB8), mRNA. (1359 bp)
agggacacaatgttgctgtaaacggtgtagctgtaaatcccctctctgtaactcatcctatttgatacataaataaccagttcccatcagacaagaaacctgctgtcttcctaccctttgggggtgatgaaggaaatgactttctagtgtttgtgtataacgcaatagcttttgtggatcataacttgggttgttttgtttggggaaggtttgctatagaagttttgtgtgcactatttctctttgtggtttactgtatttctttatatatatattataaaaagaacagaccaacaacatgaaactgcctaattcagctgtagacccctcgctcacacactgctagttcccccctcgttttgtccctgcaccccgtatttccagtgtgtgcggggatgtagttagcatgcgccgagtgaaagccacttgtgattttagggttactgtga
position 1201
XM_063959600.1 - Pseudophryne corroboree (corroboree frog) - NCBI
PREDICTED: Sagmatias obliquidens homeobox B8 (LOC113613630), transcript variant X2, mRNA. (1259 bp)
caccgcagcttccccgccgcgccagtccccgctagtggtagtttctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccatctcttgggggccggaggggtgggaaagaaaaggattttaagcaaggactccctctccctgctagggtgagcggctgcggcctggctgagccccacccccacgcccctgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctccctctccctctctctctctctctctctctctctctctctcgcctcgtactcat
position 1157
XM_027094459.1 - Sagmatias obliquidens (Pacific white-sided dolphin) - NCBI
PREDICTED: Ailuropoda melanoleuca homeobox B8 (HOXB8), mRNA. (1228 bp)
ggcctcccgctgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccgggggggaaagaaaaggattttaagcaaggactccctcgccctgcgagggtgagcggctgcggcctggctgagccccccccgcccccgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctccttctctctctctctcttctctctctctctctccccccgtcctcattcccccctcccaacccctctctccccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccaaccccccccccctttggtttggcaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgtatcctgtatc...
position 805
XM_034640667.1 - Ailuropoda melanoleuca (giant panda) - NCBI
PREDICTED: Spea bombifrons homeobox B8 (HOXB8), transcript variant X2, mRNA. (1382 bp)
cctggatgagatccggccctaacccctctctgtaacccatcttatttgatacataaattaccagtgccccttaagacatgatgtcttcctatctctggtgggggtgggtcagcgtggacaaaatgactttctagtgtttgtgtttaacgcaatagcttttgtggatcttaacttggggtttatttggtcgggaaaacgtttgctatagaagttttgtgtgcactatcctgtttgtggtaactgtatttctttatatatgtacagatatatatatatataaaagaaagaaaccaacaacatgaaactgcctaattgagctgtaggtccctctaacacattagatccccatctttgttttgtccccagtgtttgcaggatttgagttagcatgcgcgcagttgtggtattagggttcctgtgagcagactgtatactgtatatgtgaataccttttttatgaggggtgggggttgattctttattttgtttgttctgcacactttgttctattgtctaaaccatgaagcggcggaagaagacctgtaataaaagtttacaagagggagtcgtga
position 1101
XM_053453123.1 - Spea bombifrons (plains spadefoot toad) - NCBI
PREDICTED: Mesoplodon densirostris homeobox B8 (HOXB8), transcript variant X2, mRNA. (1274 bp)
ctcccaccgcagcgtccccgccgcgccagtccccgctagtggtagtttctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccctctcttgggggccgggggggaaagaaaaggattttaagcaaggactccttctccctgctagggtgagcggctgcggcctggctgagccccacccccacgcccctgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgagcgaggtactgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctctctctctctctctctctctctctctctctctctctctctctctctctttcacctcgtcctcatttcccctcccacccccctccc
position 1139
XM_060080908.1 - Mesoplodon densirostris (Blainville's beaked whale) - NCBI
PREDICTED: Spea bombifrons homeobox B8 (HOXB8), transcript variant X1, mRNA. (1385 bp)
cctggatgagatccggccctaacccctctctgtaacccatcttatttgatacataaattaccagtgccccttaagacatgatgtcttcctatctctggtgggggtgggtcagcgtggacaaaatgactttctagtgtttgtgtttaacgcaatagcttttgtggatcttaacttggggtttatttggtcgggaaaacgtttgctatagaagttttgtgtgcactatcctgtttgtggtaactgtatttctttatatatgtacagatatatatatatataaaagaaagaaaccaacaacatgaaactgcctaattgagctgtaggtccctctaacacattagatccccatctttgttttgtccccagtgtttgcaggatttgagttagcatgcgcgcagttgtggtattagggttcctgtgagcagactgtatactgtatatgtgaataccttttttatgaggggtgggggttgattctttattttgtttgttctgcacactttgttctattgtctaaaccatgaagcggcggaagaagacctgtaataaaagtttacaagagggagtcgtga
position 1104
XM_053453122.1 - Spea bombifrons (plains spadefoot toad) - NCBI
PREDICTED: Mesoplodon densirostris homeobox B8 (HOXB8), transcript variant X1, mRNA. (1277 bp)
ctcccaccgcagcgtccccgccgcgccagtccccgctagtggtagtttctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccctctcttgggggccgggggggaaagaaaaggattttaagcaaggactccttctccctgctagggtgagcggctgcggcctggctgagccccacccccacgcccctgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgagcgaggtactgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctctctctctctctctctctctctctctctctctctctctctctctctctttcacctcgtcctcatttcccctcccacccccctccc
position 1142
XM_060080907.1 - Mesoplodon densirostris (Blainville's beaked whale) - NCBI
PREDICTED: Nanorana parkeri homeobox B8 (HOXB8), transcript variant X2, mRNA. (1324 bp)
gtaaatcgccccttctctgtaaactcatcctgtttgatacctaaatgaccggtgcccctaagaaccaggaaacctgctgtcttcctacctggtaggggaaggggggaggtggggggagaggaaatgactttctagtgtctgtgtataacgcaatagcttttgtggatcataacttgggggttttgtttttttttggtggggaaggtttgctctagaagtttttgtgtgcactatttctctatgtggtttattgtattttctttctataaaacaacagacaaaaaaacagaccaacaacatgaaactgcctaattcagctgtagtcccccctctctaacacattgctagatgccccctcttgttttgtccctggcaccccgcattctctgtgtgtgcgaggatgtagttagcatgcgcccagtgaaaagccacttgtgattttttagggttactgtgaacagactgtatactgta
position 1141
XM_018565976.1 - Nanorana parkeri - NCBI
PREDICTED: Nanorana parkeri homeobox B8 (HOXB8), transcript variant X1, mRNA. (1327 bp)
gtaaatcgccccttctctgtaaactcatcctgtttgatacctaaatgaccggtgcccctaagaaccaggaaacctgctgtcttcctacctggtaggggaaggggggaggtggggggagaggaaatgactttctagtgtctgtgtataacgcaatagcttttgtggatcataacttgggggttttgtttttttttggtggggaaggtttgctctagaagtttttgtgtgcactatttctctatgtggtttattgtattttctttctataaaacaacagacaaaaaaacagaccaacaacatgaaactgcctaattcagctgtagtcccccctctctaacacattgctagatgccccctcttgttttgtccctggcaccccgcattctctgtgtgtgcgaggatgtagttagcatgcgcccagtgaaaagccacttgtgattttttagggttactgtgaacagactgtatactgta
position 1144
XM_018565975.1 - Nanorana parkeri - NCBI
PREDICTED: Plectropomus leopardus homeobox protein Hox-B8-like (LOC121938676), mRNA. (1336 bp)
aagaaagaaaaatgatagcttcctttctttgtggaacaattatcgtggaaacatttctatattgttagaagtttatcattaacaattttatctttggcagctgtatagtttttaagttaaaaaaatgatgatggtgcactttttactgtacttctcacttctatgttgttgatgttgttatggcaatgattgattgattgattgattgattgatgataatgatgatgatgatgatgatgatgatgaagatgatgatgataatgatgatgacgtagcaattaatgaaatttccaacaacatgaaactgcctatttatgccgttttagtaggtcgggtctcttttttacacactctaattgtcgtttctcgttttagtttgttttttgatcgatggtgtttgttttatgttgtcttcctttttctcttttttgggtaaaaagcatgcgcacagtgcagattaaa
position 1165
XM_042481853.1 - Plectropomus leopardus (leopard coralgrouper) - NCBI
PREDICTED: Callorhinus ursinus homeobox B8 (HOXB8), transcript variant X2, mRNA. (1486 bp)
cccgccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccggaggggggggtgaagaaaaggattttaagcaaggactccctcgccctgcgagggtgagcggctgcggcctggctgagccccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccaatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctccttctctctcttctctctctctctctctttctctctctctccgtcctcatttccccctcccaacccctctctccccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccaaccccccccccctttggtttggcaatttcgtcttaagtgtttctcaaa
position 1258
XM_073883789.1 - Callorhinus ursinus (northern fur seal) - NCBI
PREDICTED: Apteryx rowi homeobox B8 (HOXB8), transcript variant X1, mRNA. (1320 bp)
atacaatgaacagtatgcaaaagtgatctggaggtctctccagccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaatcttctctctctctctgtccttctctctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctataggagttatgtgaaattacatttgtgcacttttttaatttcccaccttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctgtagttatctctctctttctctccctccctctctctttttactttccttacttctgttcttttgtttggttcgggatttttt
position 1210
XM_026071806.1 - Apteryx rowi (Okarito brown kiwi) - NCBI
PREDICTED: Callorhinus ursinus homeobox B8 (HOXB8), transcript variant X1, mRNA. (1489 bp)
cccgccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccggaggggggggtgaagaaaaggattttaagcaaggactccctcgccctgcgagggtgagcggctgcggcctggctgagccccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccaatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctccttctctctcttctctctctctctctctttctctctctctccgtcctcatttccccctcccaacccctctctccccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccaaccccccccccctttggtttggcaatttcgtcttaagtgtttctcaaa
position 1261
XM_025859301.2 - Callorhinus ursinus (northern fur seal) - NCBI
PREDICTED: Saccopteryx leptura homeobox B8 (HOXB8), transcript variant X2, mRNA. (1506 bp)
tcccgccgcagcgtccccaccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatttccttcccttctcttggggtccgggggagaaagacaaggattgtgagcaaggactccctcgcccagcgagggtgagcggctgcggcttggctgagactccctccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtctcttttcctttgaacgtgcttctttgtaatgaccgaggtacagatttctgctaagttctcccaacaacatgaaactgcctattcacaccgtaattctttctgtctccctcgccttctctctctctctctctctctctctctctctctctctctctctctctcgttctcctccttcctcatttcctcctctcacccctctgtcctcgctgccgtccttagctcgctggctttctctcttgcttctctcttttcctcaccactcccctttggtttgacaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaaga...
position 1170
XM_066366411.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI
PREDICTED: Saccopteryx leptura homeobox B8 (HOXB8), transcript variant X1, mRNA. (1509 bp)
tcccgccgcagcgtccccaccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatttccttcccttctcttggggtccgggggagaaagacaaggattgtgagcaaggactccctcgcccagcgagggtgagcggctgcggcttggctgagactccctccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtctcttttcctttgaacgtgcttctttgtaatgaccgaggtacagatttctgctaagttctcccaacaacatgaaactgcctattcacaccgtaattctttctgtctccctcgccttctctctctctctctctctctctctctctctctctctctctctctctcgttctcctccttcctcatttcctcctctcacccctctgtcctcgctgccgtccttagctcgctggctttctctcttgcttctctcttttcctcaccactcccctttggtttgacaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaaga...
position 1173
XM_066366410.1 - Saccopteryx leptura (lesser sac-winged bat) - NCBI
PREDICTED: Prionailurus viverrinus homeobox B8 (HOXB8), transcript variant X2, mRNA. (1473 bp)
tcccgccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccgggggagggaaaagaaaaggattttaagcaaggactccctcgccctgcgagggtgaagcggctgcggcctggctgagccccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctccccttctctcttctctctctctctctctctctctctctctctctctcgtcctcatttccccctcccaacccctctctcaccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccaacacccccgccccctttggtttggcaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgta...
position 1142
XM_047845765.1 - Prionailurus viverrinus (fishing cat) - NCBI
PREDICTED: Prionailurus viverrinus homeobox B8 (HOXB8), transcript variant X1, mRNA. (1476 bp)
tcccgccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccgggggagggaaaagaaaaggattttaagcaaggactccctcgccctgcgagggtgaagcggctgcggcctggctgagccccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctccccttctctcttctctctctctctctctctctctctctctctctctcgtcctcatttccccctcccaacccctctctcaccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccaacacccccgccccctttggtttggcaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgta...
position 1145
XM_047845764.1 - Prionailurus viverrinus (fishing cat) - NCBI
PREDICTED: Sinocyclocheilus anshuiensis homeobox protein Hox-B8a-like (LOC107662386), transcript variant X2, mRNA. (1508 bp)
aaatgactgggactagacgaatgactatacacttaatgtggtgaccacagaacttcaggaagacgaaggacaagaggcatttctactttttaactgttgttcagagagtatgatagtgttaaaactagtctcctttctttgtgaaataattatcgtgaaacttaagtttctattgttaggatattgtcattaacaattaccttggcagctgtatagtttttaagttaaatggtgcacttttaactgttctcacttatatgttatgatgatgacgtagacattaatgacttccaacaacatgaaactgcctatttatgccgtagaatctccttttacacgtctttggttcttcttaaatcgatggtatttttgttgtcttcctttcatggggtaagcatg
position 1400
XM_016452382.1 - Sinocyclocheilus anshuiensis - NCBI
PREDICTED: Sinocyclocheilus rhinocerous homeobox protein Hox-B8a-like (LOC107740672), mRNA. (1509 bp)
aaattactgggactagacgaatgactatacacttaatgtggtgaccacagaacttcaggaagacgaaggacaagaggcatttctactttttaactgttgttcagagagtatgatagtgataaaactagtctcctttctttgtgaaataattatcgtgaaacttaagtttctattgttaggatattgtcattaacaattaccttggcagctgtatagtttttaagttaaatggtgcacttttaactgttctcacttacatgttatgatgatgacgtagaaatgaatgacttccaacaacatgaaactgcctatttatgccgtagaatctctttttacacgtctttggttcttcttaaatcgatggtatttttgttgtcttcctttcatggggtaagcatg
position 1401
XM_016553178.1 - Sinocyclocheilus rhinocerous - NCBI
PREDICTED: Sinocyclocheilus anshuiensis homeobox protein Hox-B8a-like (LOC107662386), transcript variant X1, mRNA. (1511 bp)
aaatgactgggactagacgaatgactatacacttaatgtggtgaccacagaacttcaggaagacgaaggacaagaggcatttctactttttaactgttgttcagagagtatgatagtgttaaaactagtctcctttctttgtgaaataattatcgtgaaacttaagtttctattgttaggatattgtcattaacaattaccttggcagctgtatagtttttaagttaaatggtgcacttttaactgttctcacttatatgttatgatgatgacgtagacattaatgacttccaacaacatgaaactgcctatttatgccgtagaatctccttttacacgtctttggttcttcttaaatcgatggtatttttgttgtcttcctttcatggggtaagcatg
position 1403
XM_016452381.1 - Sinocyclocheilus anshuiensis - NCBI
PREDICTED: Apodemus sylvaticus homeobox B8 (Hoxb8), transcript variant X2, mRNA. (1494 bp)
tcccaccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggtccgaggggaaaaataagaaaaggattttaagcaaggactccctcgtcctgcgagggtgatcgactgcggcctggcagaatcccctcgccccctccccatgtaaaaaagcctccttgtgcaatggtctttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttttcccaacaacatgaaactgcctattcacgccgtaattctatctgtctccctctcactttctctctttctctctctctctttctctcaccgcgtcctcatctttcctcgcaactcccctctccccgctgccctccctagctggctttctctcttgcttctctcttttcctcctgtccccccccccaccccctttggtttgacaattttgtcttaagtgtttctcaaaagagattactttagttagcatgcgcgctgtgagcaattgttaaaaagtgtt
position 1220
XM_052195324.1 - Apodemus sylvaticus (European woodmouse) - NCBI
PREDICTED: Apodemus sylvaticus homeobox B8 (Hoxb8), transcript variant X1, mRNA. (1497 bp)
tcccaccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggtccgaggggaaaaataagaaaaggattttaagcaaggactccctcgtcctgcgagggtgatcgactgcggcctggcagaatcccctcgccccctccccatgtaaaaaagcctccttgtgcaatggtctttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttttcccaacaacatgaaactgcctattcacgccgtaattctatctgtctccctctcactttctctctttctctctctctctttctctcaccgcgtcctcatctttcctcgcaactcccctctccccgctgccctccctagctggctttctctcttgcttctctcttttcctcctgtccccccccccaccccctttggtttgacaattttgtcttaagtgtttctcaaaagagattactttagttagcatgcgcgctgtgagcaattgttaaaaagtgtt
position 1223
XM_052195323.1 - Apodemus sylvaticus (European woodmouse) - NCBI
PREDICTED: Nannospalax galili homeobox B8 (Hoxb8), transcript variant X2, mRNA. (1355 bp)
tgggcctcccaccgcagagtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcccgggggccgggaaaaaaaggattttaagcaaggactccctcgccctgcgagggtgagtggctgcggcctgacagagcccccccctcgcccccgccccgtgtaaaaaaagcctccttgtgcaatggtcttttttccttaaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttttcccaacaacatgaaactgcctattcacgccgtaattctgtctccctcacctctctctctctctctctctctctctctctctctctctctctctcatcccccctctctc
position 1249
XM_017799422.2 - Nannospalax galili (Upper Galilee mountains blind mole rat) - NCBI
PREDICTED: Nannospalax galili homeobox B8 (Hoxb8), transcript variant X1, mRNA. (1358 bp)
tgggcctcccaccgcagagtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcccgggggccgggaaaaaaaggattttaagcaaggactccctcgccctgcgagggtgagtggctgcggcctgacagagcccccccctcgcccccgccccgtgtaaaaaaagcctccttgtgcaatggtcttttttccttaaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttttcccaacaacatgaaactgcctattcacgccgtaattctgtctccctcacctctctctctctctctctctctctctctctctctctctctctctcatcccccctctctc
position 1252
XM_008838289.3 - Nannospalax galili (Upper Galilee mountains blind mole rat) - NCBI
PREDICTED: Apteryx rowi homeobox B8 (HOXB8), transcript variant X2, mRNA. (1359 bp)
atacaatgaacagtatgcaaaagtgatctggaggtctctccagccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaatcttctctctctctctgtccttctctctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctataggagttatgtgaaattacatttgtgcacttttttaatttcccaccttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctgtagttatctctctctttctctccctccctctctctttttactttccttacttctgttcttttgtttggttcgggatttttt
position 1249
XM_026071807.1 - Apteryx rowi (Okarito brown kiwi) - NCBI
PREDICTED: Lepidothrix coronata homeobox B8 (HOXB8), transcript variant X2, mRNA. (1394 bp)
tctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaatcttctctctctctctctctgtccttctctctgtctctctctcttctttcctggggggtgggttggttaacgtagctttcaatgctagaggagttacgtgaaattacgttcgtgcactttttttttttttttgaaatttgatttttcttttccttttccacctttttggttgtggtttatctgtatgtgccggaggtagctactgaaacaaacatcccaacaacatgaaactgcctatttatgctctagttatctctctctttctctctctcttcctctctttgctttccctgctgttcttttccttggttcggtctttttt
position 1289
XM_017837101.1 - Lepidothrix coronata (blue-crowned manakin) - NCBI
PREDICTED: Lepidothrix coronata homeobox B8 (HOXB8), transcript variant X1, mRNA. (1397 bp)
tctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaatcttctctctctctctctctgtccttctctctgtctctctctcttctttcctggggggtgggttggttaacgtagctttcaatgctagaggagttacgtgaaattacgttcgtgcactttttttttttttttgaaatttgatttttcttttccttttccacctttttggttgtggtttatctgtatgtgccggaggtagctactgaaacaaacatcccaacaacatgaaactgcctatttatgctctagttatctctctctttctctctctcttcctctctttgctttccctgctgttcttttccttggttcggtctttttt
position 1292
XM_017837100.1 - Lepidothrix coronata (blue-crowned manakin) - NCBI
PREDICTED: Anser cygnoides homeobox B8 (HOXB8), transcript variant X2, mRNA. (1570 bp)
aaacaatgaacagtatgcaaaagtggtctggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaatttttttttctctctctctgtctttctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctatagaagttatgtgaaattacatttgtgcactttttaaaaaatttccactttttttgttgtggtttatctgtatgtactggaggtagcgattgacacaaacatcccaacaacatgaaactgcctatttatgctacagttttctctctctttctctctctttactttctttacttctgttcttatgttcgcttcattttttttgttttgtttttttcgatttttgaatgtctcttaaaaaaaaagagaaaaaaacattaaaaaacgttttcctctcctttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattactttattgggggaactaatgatatattttgttgttctttcatcactttgtt...
position 1203
XM_013200229.3 - Anser cygnoides (Swan goose) - NCBI
PREDICTED: Anser cygnoides homeobox B8 (HOXB8), transcript variant X1, mRNA. (1573 bp)
aaacaatgaacagtatgcaaaagtggtctggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaatttttttttctctctctctgtctttctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctatagaagttatgtgaaattacatttgtgcactttttaaaaaatttccactttttttgttgtggtttatctgtatgtactggaggtagcgattgacacaaacatcccaacaacatgaaactgcctatttatgctacagttttctctctctttctctctctttactttctttacttctgttcttatgttcgcttcattttttttgttttgtttttttcgatttttgaatgtctcttaaaaaaaaagagaaaaaaacattaaaaaacgttttcctctcctttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattactttattgggggaactaatgatatattttgttgttctttcatcactttgtt...
position 1206
XM_013200228.3 - Anser cygnoides (Swan goose) - NCBI
PREDICTED: Salvelinus sp. IW2-2015 homeobox B8a (hoxb8a), mRNA. (1489 bp)
cctgacggtgacaaaggacaggaccattcacattgtggttgttgggagacaaaaygaaacatttgaacgggaaattaagcatttgtactttttatctgatgttggaaagtattattgtgttaaaaatagcgtcctttctttgtggaacaattatcgtgaaaaaaaaacatttttattgttagaattttgacattaacaattatcttggcagctgtatagtttttaagttaaattgtgcaatttttactgttctcacttcaatgttatgatgacgtagcgaataatgaattccaacaacatgaaactgcctatttatgctgtaggctttcctctttttacacttgttcttccttagttcgttttgattgatggtattttgttgtcttccttatttgggtaagcatgcgcacagtgcaaaaaaaaatgaaaaaatgaaaaaaaacacaatggaaataaaaaaggatgtcatgtga
position 1307
XM_024135977.2 - Salvelinus sp. IW2-2015 - NCBI
PREDICTED: Phalacrocorax aristotelis homeobox B8 (HOXB8), transcript variant X3, misc_RNA. (1580 bp)
gtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattttctctctctctctgtctttctctctgtctctctcttctttcctggggggtgggttgattaacatagctttcaatgctataggagttacgtgaaattacatttgtgcacttttttttttttaattattattttccaccttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctatagttatctctccctttctctctcttcctctctttactttccttacttctcttcttttctttggttcgggatttattttttgttttggtttgtttttgtttacaatttttgaatgtctcttccaaaaaaaaggaaaaaaagacaaaaaaagacaagaaaaaaaagcgtttttctctcctttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattactttattgggggaac...
position 1177
XR_012664188.1 - Phalacrocorax aristotelis - NCBI
PREDICTED: Ursus arctos homeobox B8 (HOXB8), transcript variant X2, mRNA. (1558 bp)
ggcctcccgctgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctgccgtggatctccttcccttctcttgggggccgggggggaaagaaaaggattttaagcaaggactccctcgccctgcgagggtgagcggctgcggcctggctgagccccccacgcccccgccccatgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctcctctctctctctctcttctctctctctctctctccgtcctcatttctccctcccaacccctctctccccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccccccctttggtttggcaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgtatcctgtatccgtgaattgct...
position 1141
XM_026513068.4 - Ursus arctos (brown bear) - NCBI
PREDICTED: Ursus arctos homeobox B8 (HOXB8), transcript variant X1, mRNA. (1561 bp)
ggcctcccgctgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctgccgtggatctccttcccttctcttgggggccgggggggaaagaaaaggattttaagcaaggactccctcgccctgcgagggtgagcggctgcggcctggctgagccccccacgcccccgccccatgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctcctctctctctctctcttctctctctctctctctccgtcctcatttctccctcccaacccctctctccccgctgccctccctagctcgctggctttctctcttgcttctctcttttcctcccccccctttggtttggcaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgtatcctgtatccgtgaattgct...
position 1144
XM_026513067.4 - Ursus arctos (brown bear) - NCBI
PREDICTED: Falco cherrug homeobox B8 (HOXB8), mRNA. (1563 bp)
gtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattttctctctctctctgtctttctctctgtctctctcttctttcctggggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcactttttttttgttttaaattttccacctttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctctagttatctctttctttctctctctttctctctttactttccctgcttctgttcttttctttggttcgggattttcttttttgtttgtttgggttttgtttacaattcttaaatgtctcttccaaaaaaaaaaaaaaaagggaaaaaaaggaaaaaaaaaagacaagaaaaaaagcgtttttctctcatttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattacttta...
position 1223
XM_005440041.3 - Falco cherrug (Saker falcon) - NCBI
PREDICTED: Falco peregrinus homeobox B8 (HOXB8), transcript variant X1, mRNA. (1566 bp)
gtatgcaaaagtgatcgggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaaattttctctctctctctgtctttctctctgtctctctcttctttcctggggggggtgggttggttaacatagctttcaatgctataggagttacgtgaaattacatttgtgcactttttttttgttttaaattttccacctttttttgttgtggtttatctgtatgtactggaggtagctattgaaacaaacatcccaacaacatgaaactgcctatttatgctctagttatctctttctttctctctctttctctctttactttccctgcttctgttcttttctttggttcgggattttcttttttgtttgtttgggttttgtttacaattcttaaatgtctcttccaaaaaaaaaaaaaaagggaaaaaaaggaaaaaaaaaaagacaagaaaaaaagcgtttttctctcatttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaat
position 1264
XM_005236559.3 - Falco peregrinus (peregrine falcon) - NCBI
PREDICTED: Onychostruthus taczanowskii homeobox B8 (HOXB8), transcript variant X2, mRNA. (1449 bp)
cggtagtggaacgcaatagcttctgtaaaacatgactgtgaaatcctctccctctctgtctttctctctcttctttccgggggcgtggggggtgggttggttaacatagctttcagcgctagaggagttatgtgatattacatttgtgcactttttttttgttggttttttttttaaattttgggtctctagttggttatttccccattcctgttttttttttttttattattattatttttgttgtggtttatctgtgtgtactggaggtagctgttgagacaaacatcccaacaacatgaaactgcctatttatgctgtagttatctctctttctctctcttca
position 1394
XM_041402310.1 - Onychostruthus taczanowskii (white-rumped snowfinch) - NCBI
PREDICTED: Onychostruthus taczanowskii homeobox B8 (HOXB8), transcript variant X1, mRNA. (1452 bp)
cggtagtggaacgcaatagcttctgtaaaacatgactgtgaaatcctctccctctctgtctttctctctcttctttccgggggcgtggggggtgggttggttaacatagctttcagcgctagaggagttatgtgatattacatttgtgcactttttttttgttggttttttttttaaattttgggtctctagttggttatttccccattcctgttttttttttttttattattattatttttgttgtggtttatctgtgtgtactggaggtagctgttgagacaaacatcccaacaacatgaaactgcctatttatgctgtagttatctctctttctctctcttca
position 1397
XM_041402309.1 - Onychostruthus taczanowskii (white-rumped snowfinch) - NCBI
PREDICTED: Pongo abelii homeobox B8 (HOXB8), transcript variant X2, mRNA. (1620 bp)
ctcccaccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggccggggtgaaagaaaaggatttaagcaaagactccctcgccctgtgagggcgagcggctaaggcccggctgagccccccatgcccctcccaccccgtgtaaaaagcctccttgtgcaattgtcttttttttcctttgaacgtgcttctttgtaatgaccaaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctcccttctctctctctctctctctctttctctctctctctcgctcgctctcgctctcgctctctctctctctcgctgcgtcctcatttcccctcccaatcctctctccccactgcacccccccagctcgctggctttctctctggcttctctcttttcctcctccacccaccccctttggtttgacaattttgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttacaagtgttcttag...
position 1157
XM_024235563.3 - Pongo abelii (Sumatran orangutan) - NCBI
PREDICTED: Anas platyrhynchos homeobox B8 (HOXB8), transcript variant X3, mRNA. (1518 bp)
acaatgaacagtatgcaaaagtggtctggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaatttttttctctctctctctctgtctttctgtctctctcttctttcttggggggtgggttggttaacatagctttcaatgctatagaagttatgtggaattacatttgtgcacttttttaaaaatttccactttttttgttgtggtttatctgtatgtactggaggtagcgattgacacaaacatcccaacaacatgaaactgcctatttatgctacagttatctctctctttctctctttactttccttacttctgttcttttgttcctttcattttgttttgttttgttttgttttcgatttttgaatgtctcttaaaaaaaaaaaaaaaaaggagaaaaaaaaagcataaaaaagcgttttcctctcctttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattactttattgggggaactaatgatatattttgttgttctt...
position 1138
XM_038168559.2 - Anas platyrhynchos (mallard) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : https://ggrna.dbcls.jp/CCAACAACAUGAAACUGCCUA
lang : en | div : | spe : | query_string : CCAACAACAUGAAACUGCCUA | format : html | download : 

0.000 | 0.000 | search_start;
0.076 | 0.076 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:CCAACAACATGAAACTGCCTA)?to=0&format=json
0.111 | 0.035 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:CCAACAACATGAAACTGCCTA)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.115 | 0.004 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]