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2024-04-30 22:41:23, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Ostrea edulis uncharacterized LOC125683587 (LOC125683587), ncRNA. (2779 bp)
agtaggtcacagtgacctacttttttaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaagagtaggtcaccgtgaccttcttttggtatttgacagctaaattactatatttcagacactatttgacctataatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgttcaccaaaaagtaggtcaccatgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttgcatgtttgaagggtgttgacgaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccaaaaggtaggtcaacatgacctacgattggaatttg...
position 1318 1464 1623 1902 2030 2158 2414 2541
XR_008802991.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis metallo-beta-lactamase domain-containing protein 1-like (LOC125659624), transcript variant X3, mRNA. (4451 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgtgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttgaaatttgacggctatatttatatatttcagatactatttgatctacagtcatcaaactttgtcagttgatgggtcttgcatgttcgaagggtttcgaccaaaaagtaggtcaacttgacctgcttttggaattggacacctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaagatcattaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 2896 3042 3189 3468 3596 3724 3980 4107
XM_048891361.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis metallo-beta-lactamase domain-containing protein 1-like (LOC125659624), transcript variant X2, mRNA. (4476 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgtgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttgaaatttgacggctatatttatatatttcagatactatttgatctacagtcatcaaactttgtcagttgatgggtcttgcatgttcgaagggtttcgaccaaaaagtaggtcaacttgacctgcttttggaattggacacctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaagatcattaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 2921 3067 3214 3493 3621 3749 4005 4132
XM_048891360.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis metallo-beta-lactamase domain-containing protein 1-like (LOC125659624), transcript variant X1, mRNA. (4503 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgtgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttgaaatttgacggctatatttatatatttcagatactatttgatctacagtcatcaaactttgtcagttgatgggtcttgcatgttcgaagggtttcgaccaaaaagtaggtcaacttgacctgcttttggaattggacacctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaagatcattaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 2948 3094 3241 3520 3648 3776 4032 4159
XM_048891359.2 - Ostrea edulis - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133190573 (LOC133190573), mRNA. (3656 bp)
gagaacgtcaactaaaaagtaggtcaccttgacctactttttgaattttatggctaatgtttttcaaaacaattaaggtcattaattcgaatactgagaggtttagaatcattaaatcttgtaagatgatgcatcttggggccatgaaacatatttattaaaaagtaggtcaaagtgaccttctttttgaactttgcagt...ggtcctcggagtaagtcaactgaaaagtaggtcaccgtgacctacttttgaaaatttatggctttaattaaatatttttcaggtattaattggcttagaatcatcaaactttgtcagttgatgcatcttgggtccttggagtatgacaactgaaaggtaggtcaccttgacctacttttgaaattttatggctgtattta...tcttgggtcttcggagtaggtcgactgaaaagtaggtcactttgacctaatttatgactttagttaaatatttcaggtactaattggcttagaatcatcaaactttgtcagttgatgcatcttgggtcctcggagtacaacacctgaaaagtaggtcactgtgacctacttttgaaaatttatggcttttattaaatatt...
position 1387 1533 1938 2323 2442 2570 2904
XM_061326275.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125651708 (LOC125651708), ncRNA. (5282 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcacacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 1581 1727 1875 2154 2282 2666 2793
XR_008803060.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis FAD-dependent oxidoreductase domain-containing protein 1-like (LOC125680598), mRNA. (4549 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgttgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgtcgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 42 189 468 596 724 1236
XM_048920279.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis RING finger protein 145-like (LOC125658441), transcript variant X1, mRNA. (6236 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcaacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatattcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcgaagggtttcgaccaaaaagtaggtcaacttgacctacttttggaattggacacctatatttata...gcatgttcggagttcgatgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatattaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 4709 4855 5002 5279 5406 5790 5917
XM_048889708.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis carboxypeptidase A4-like (LOC125651525), transcript variant X2, mRNA. (6829 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagccttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tttcgaccaaaaagtaggtcaacttgacctacttttggaattggacacctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgtgtcttgcatgttcaaagggtgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttg...
position 5161 5307 5454 5733 5861 5989 6245 6372
XM_048880160.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis RING finger protein 145-like (LOC125658441), transcript variant X2, mRNA. (6300 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcaacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatattcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcgaagggtttcgaccaaaaagtaggtcaacttgacctacttttggaattggacacctatatttata...gcatgttcggagttcgatgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatattaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 4773 4919 5066 5343 5470 5854 5981
XM_056150591.1 - Ostrea edulis - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133200437 (LOC133200437), ncRNA. (353 bp)
experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:133200437" ORIGIN // atgattctaagccagaaagtacctaagatacttaaataaagtcataaaatgtcaaaagtaggtcaccgtgacctactttttggtcgacattttccgaaaacccaagatgcatcaactgacaaagtttgacaattctaagccaataagttcctgagatacttaaatatagccataaaatgtcaaaataggtcatggtgacctactttttggttgacattctccgaaaacccaagatgcatcaactgacaaagtttgatgattctaagccaataagtacctaagatacgtaaatatagccataaaatgtcaaaagtaggtcactgtgacctactttttggtcgatgttttccgaa
position 60 187 315
XR_009722940.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis carboxypeptidase A4-like (LOC125651525), transcript variant X1, mRNA. (7310 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagccttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tttcgaccaaaaagtaggtcaacttgacctacttttggaattggacacctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgtgtcttgcatgttcaaagggtgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttg...
position 5642 5788 5935 6214 6342 6470 6726 6853
XM_048880159.2 - Ostrea edulis - NCBI
PREDICTED: Saccostrea echinata 3-hydroxybutyryl-CoA dehydrogenase-like (LOC133177755), mRNA. (5390 bp)
tatcatgttgactcaaaagtaggtcatgatgacctactttttaaattttgcggccattctttttcaaaatgatttagaggcatattttgaacaatttaaggcctatgatcattaaactttgtcagttgatgtatcttgggtcctcgaagtacgtcaactaaaaaataggtcaccttgacctactttttgaattttatggc...aaacatatttattaaatagtaggtcacaatgacctgctttttgaactttgcaggcattcgatttcaaagcattttagaggcataatttggacattttaaggcctatgatcataaaactttgtaagttgatgcatcttggatcctcagaaaacgtcaactgaaaagtaggtcactgtgacctgtgtcaatttatatgacta...gggtcttcgaagtaggttgactgaaaagtaggtcaccgtgacctacttttgaaaatttatggcattatttaaatattactggtacttattggcttagaatcatcagactttgtcagttgatgcatctttggtcctcagagtacaacaactgaaaagtaggtcaccatgacctactttttgaaaatttatggctttaatta...
position 3829 3975 4121 4267 4393 4648
XM_061312660.1 - Saccostrea echinata - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133179799 (LOC133179799), ncRNA. (1186 bp)
caatctatcctaagacccaagatgcatcaactgacaaagtttgatgattcttagccagttagggctgaagatatttaaatgtaactataaaatactataagtaggtcatggtgacctactttttgattgaaattttctgaggacacaagatgcattaattgacatagattgatgattctaagtcaataagtacttgagatattcaaaagtgggtcacagtgacctactttttggtcaacattctccaaaatcccaaggtgcataaactcacaacgtttgacaattctaagccaataagtaccctagaatacttaaatatagccataaatgtcacaagtaggtcaccgtgacctatattttgatcatcattctctgagaacccaagatgcatcaaataacaaaatttggtgattctaaaactctcggtgtctgaaataatgggattaaatgttttagaaaagattagccataaaattcaaaaagtaggtcacgatgacctacttttaagttgatgttatttgtggacccaagatgcaccaactgacaaagttttatgatcataggccttaaagtgtccaaaatatgcctccaattcaattt...
position 156 392 538
XR_009720176.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X9, mRNA. (7174 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5122 5268 5416 5695 5823 6208
XM_048917404.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X1, mRNA. (7186 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5134 5280 5428 5707 5835 6220
XM_048917405.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X4, mRNA. (7215 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5163 5309 5457 5736 5864 6249
XM_048917399.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X3, mRNA. (7217 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5165 5311 5459 5738 5866 6251
XM_048917398.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X8, mRNA. (7283 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5231 5377 5525 5804 5932 6317
XM_048917403.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X7, mRNA. (7353 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5301 5447 5595 5874 6002 6387
XM_048917401.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X6, mRNA. (7365 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5313 5459 5607 5886 6014 6399
XM_048917402.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis two pore channel protein 1-like (LOC125664453), mRNA. (8631 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tttcgaccaaaaagtaggtcaacttgacctactttttgaattggacacctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgcgtcttgcatgttcaaagggtgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttg...
position 3688 3834 3982 4261 4389 4517 4773 4900
XM_056151036.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X2, misc_RNA. (7058 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5134 5280 5428 5707 5835 6092
XR_008800251.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X5, mRNA. (7911 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5859 6005 6153 6432 6560 6945
XM_048917400.2 - Ostrea edulis - NCBI
PREDICTED: Saccostrea echinata ecdysteroid-phosphate phosphatase-like (LOC133172352), mRNA. (7866 bp)
ggtcgactaaaaagtaggtcacagtgacctacttttgaaatttatggctttaattaaatatatggggtactaattggctttgaatcatcaaactttgtcagttgatgacttttgggtcttcggagtaggtcgactaaaaagtaggtcaccatgacctacttgcaaaaatttatggctttaattaaatattttgggtactaattggcttagaatcataaaactttgtcagttcatgtgtcttgggtcctcggagtgcaacaactgaaaagtaggtcatggtgacctacttttgaaaattta...agattgactgaaaagtaggtcactgtgacctacttttgaaaatttatggcttcaattaaatattttcggtacttattggcttagaatcatcaaactttgtcagtcgatgtatctttggtcctcggagtacagcaactgaaaagtaggtcaccgtgacctacttttgaaaatttatggctttaattaaatatttcaggtactaattggcttaaaatcaaactttgtcaattgatgcatcttgggtccttggagtacaacaattgaaaagtaggtcactttgacctacttataaaattttat...
position 5142 5288 5434 5749 6261 6389 6514
XM_061307220.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125666634 (LOC125666634), mRNA. (4951 bp)
aaagtaggtcatggtgacctactttttgaatttcgcaggtaattattatgaaatggattttgatgaatatcttggacacttttgagcctatgatcatcaaaagttgtcaattgatggatcatgggaccttgaactgcatcatgtaaaaagtaggtcaccatgacctactttctgaattttatggctaatcatttatatatacattttaggttgttatttcagataccaagaggtttagaatcatcaaaccttgtaagttgatgcgtctagaggccttgaaacatatttataaaaaaaaagtaggtcacagtgacctacttttgaatttttgcagacattcaaatttcacattttcaattttagatgcatattttggacactatgaaagctaggatcatcaaactttgttagttgatgcatcttgagtcttcatagtttgttcaccaaaaagtaggtcactgtgacctacttttggaatttgacgtctatattttaatatttcagatactatttgacttacaattatcaaactttgtcagttgttgcattttgagtcttcagagtgtgttgactaaaaagtaggtcaccgtgacctatttt...
position 1469 1615 1765 1916 2044
XM_048899828.2 - Ostrea edulis - NCBI
PREDICTED: Ruditapes philippinarum uncharacterized LOC132713846 (LOC132713846), ncRNA. (908 bp)
caatcatcctatgaagtttgaatattgtgggctaaatggaactaaagttatgctcaagaaactgttttcaaattctaagtaatagtgaccttgacctttgaccttgtgaccccaaaatcaataggggtattctacccaatatggacaatcatcctatgaagtttgaacactgtgggccaaatagaacttaagttatgctccggaaactgttttcagttctaaggtcataatgaccttgacctttgacctgtgaccccaaaatctaaaggggtcttctaccaaatatggacaatcatcctatgaagtttgaacactgtaggacaaatggaacttaagttatgctccagaaactgttttcagttttaaggtcatagtgaccttgacctttgaccttgtgaccccaaaatcaataggggtcttctaccaaatatggacaatcatcctatgaagtttgaacactgtgggccaaaatgaacttaagttatgctccggaaactgttttcagttttaaggtcatagtgaccttgacctttgaccttatgacccaaaagtcaataggggtcttcaacccaatatggacaatcatcctatgaagtttga...
position 255 399
XR_009623496.1 - Ruditapes philippinarum (Manila clam) - NCBI
PREDICTED: Mya arenaria uncharacterized LOC128230181 (LOC128230181), transcript variant X1, mRNA. (2877 bp)
aaggtcacagtgaccttgaatgataaaaggttgtccgagtgataactcgacaatgcctgaacccatggccctcaaacttgacatggaggcttagcctgaccagtagatgacccctattcattttaaggttcttcgggccaatggttaaggtcaaagtgacctttaatgatagaaggttgtcttagtgataactagacaatgcctgcaccaatggccctcaaacttgacttagaggttgggccgaggacccctctcgattttgggggtcatcaagtcaaaagtcaaggtcaccgtgacctt...tcatggtcacagtgaccttaaatgcgaaaatgttcttagagtgataacttgacaatgcctgcacctttggccctcaaacatgacttgggggttgggcctgacctgtagatgaccccttttatttaaggggtcatcaaaggtcaaggtcacactgaccttgaactctgaaagcttttctgtgtgataaactgacaatgcctgcacccatgaccctcaaacttgacatttaggttttgggtcaccagttgatgacgcctttggattttgaggtcaaaggtcatggtcataactcatattcat...
position 1089 1391 1528 1909
XM_052942238.1 - Mya arenaria - NCBI
PREDICTED: Zonotrichia albicollis uncharacterized LOC113460778 (LOC113460778), ncRNA. (617 bp)
gtcagtgtgacctgaagctcaggcagctcttcctgggggagaacaacccagaacaggaataaaaaaggagattcaccctcagtggaaccaggacctcaaaactgaggataaacccccacaattcctgtgaaagggaagatgttaagtgcaatccatgaggaattccctgactcagggagattttgccttgaggtcaatgtgacctgaacctcaggcagttctagctggcagagaacaacccagatcaggaataaaaaggagattcacccccagtggaaccagaatgtcagaactgaggataaacccccacaatttctgtgaaaggggagatgttaaatgcaattcaagaggaggaattccctgacacagggagattttgccttgaggtcagtgtgacctaagctcaggcagctcttcctcggggagaaaaacccagatcaggaataaaaaaagagattcacccccagtggaaccagaatgtcagaattgaggataaatcaccccccaattcccatgaaaggggaggaattccctgacacagggagattttgcctcgaggtcagtgtgacctgaaggtccaagctcaggcagcttttcctg...
position 191 385
XR_003382616.1 - Zonotrichia albicollis (white-throated sparrow) - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC130049079 (LOC130049079), ncRNA. (313 bp)
using gene prediction method: Gnomon." /db_xref="GeneID:130049079" ncRNA 1..313 /ncRNA_class="lncRNA" /gene="LOC130049079" /product="uncharacterized LOC130049079" /db_xref="GeneID:130049079" ORIGIN // tcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatattttcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttgcatgttcgaagggtttcaaccaaaaagtaggtcaccttgacctacttttggaattgga
position 27 155
XR_008797605.1 - Ostrea edulis - NCBI
PREDICTED: Epinephelus fuscoguttatus cysteine-rich and transmembrane domain-containing protein 1-like (LOC125898785), mRNA. (1744 bp)
accttttgaccttcattattttatcctgttagacatttgtgtcaagttcggtcagaattagtgaatgaattcttcagttatggacaaaaacacgtttgtgaggtcacagtgaccttggcttgtgtccaatctgacgtttgcgccaaattgaagagaaatcccatcaaagccgtcttgagtcacgggattcagaagaatgagacagacgtaaaggcacagtgacctttgaccttcaaattctaatcagctcattgttaagtccaagtggacatttgtgccaaatttgaagaaattcccctgaggcattcttcagacatcgtgttgacaaggatgagtcagacgaggtcacactgacctttttaccactaaagtctaatcagttcatcgttcagtccaagtggacgttcatgccaaatttgaaaaaaaaaaacccaaaaaccttgaggtgttctcgagaggtcatgttagcgagaatgaaatggacgaggtcacggtgacctttaaagagataatcaccaaagtctaatcagttcatcgtggagccccagtgacagtttgtgccaaattaaaaaaaaatccctcgaggtttctgagatgtcg...
position 811 1053 1196
XM_049592729.1 - Epinephelus fuscoguttatus (brown-marbled grouper) - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127879514 (LOC127879514), transcript variant X2, ncRNA. (2109 bp)
tcaaggtcacgatgacccgaaatagttaaatggtttccggatgataactcaagaacgcttaggcctaggatcatgtaacttcataggtacattgatcataactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacgatgacctgaaatagtaaaatggtttccggatgataactcaagaacgcttaggcctaggatcatgaaacttcataggtacattgatcatgactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacagtgacctgaaatagtaaaatggtttctggatgataactcaagaacgcttaggcctaggatcatgaaacttcataggtacattgatcatgactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacggtgacctgaaatagtaaaatggtttctggatgataactcaagaacgcttatgcctaggatcatgaaacttcataggtacattgatcatgactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacggtgacctga...
position 669 814 959
XR_008049130.1 - Dreissena polymorpha - NCBI
PREDICTED: Epinephelus lanceolatus cysteine-rich and transmembrane domain-containing protein 1-like (LOC117264835), mRNA. (1824 bp)
gaccttttgaccttcattattttatcctgttagacatttgtgtcaagttcggtcagaattagtgaaagaatccttcagttatggccaaaaacacgtttgtgaggtcacagtgaccttggcttgtgtccaatctgacgtttgcgccaaattgaatagaaatcccatcaaagccgtcttgagtcacagggttcagaagaatgagacagacgtaaaggcacagtgacctttgaccttcaaattctaatcagctcattgttaagtccaagtgaaagtttgtgccatatttgaagaaattcccctgaggcattcttcagacatcgtgtcgacaaagatgagtcagacgaggtcacactgacctttttaccactaaagtctaatcagttcattgttcagtccaagtggacgttcatgccaaatttgaaaaaaaaacaaaaaaaaccttgaggtgttctcgagaggtcatgttagcgagaatgaaatggacgaggtcacggtgacctttaaagagataatcaccaaagtctaatcaggtcatcgtggagccccagtgaaagtttgtgccaaattaaaaaaaaaaatcccttaaggtttctgagatgt...
position 814 1056 1198
XM_033639127.1 - Epinephelus lanceolatus (giant grouper) - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127845391 (LOC127845391), ncRNA. (1822 bp)
gtccacagtaggcgtcgtgcttaaaccttagaattggctctaaaattaaagtgcttccacctacaactttgaaacttcatgtgtagatgcatcttgatgagttctacacgcccccccccccatttttggatcactaggtcaaaggttaaggtcaatgtgacctctaatatcaaactttaacataggttctaaaatcaaagtgcttccccctatatttttgaaacttcatatgtagttgcaccttaatgagttctacatgccacacccatttttaggtcactaggtcaaaggtcaaggtcactctgacctcttatatcaaactttaacataggttctaaaatcaaagtgcttccacctacaactttgaaacttcatatgtagatgcaccttgatgagtcatacacgccacacccatatgggtcactaggtcaaaggtcaaggtcactttgacctctaaaagaatgatgacaagatttcgcagccgagcgtggcacgcgttatgcggtgcttttgttcatcaaggaataacaaaaatacaattttattgatatgcacgaatttgtagtaaataatattaacaatgtgtatcttatgtttttt...
position 616 762 906
XR_008033203.1 - Dreissena polymorpha - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC130054058 (LOC130054058), mRNA. (4269 bp)
aaactttgatattttgcttagtataaggactaggatcatcaaattttgtcagttgatgcatcttaggacctaatatcatgttgtctcaaaagtaggtcatggtgacctattttttaatttcgcaggtaattattattaaatggattttgatgcatatcttggacacttttgagcctatgatcatcaaaagttgtcagttg...aggttgttatttcagataccgagaggtttagaatcatcaaaccttgtaagttgatgcgtctagaggcctcaaaacatatttatttaaaaaagtaggtcacggtgacctactttttttaattttgcagacattcaaatttcacattttcaatcagtttagatgcatattttggacactatgaaagctaggatcatcaaact...agtcttcagagtgtgttgactaaaacgtaggtcaccgtgacctatttttggattttgacggctatatttgaatatttcagatactatttgacttacaatcatcaaacttttgtcagttgatgggtcttgagtcttcagagtgtgtcgaccaaaaagtaggtcactgtgacctacttttggaatttgacgtttatatctga...
position 134 428 693 822
XM_056162355.1 - Ostrea edulis - NCBI
PREDICTED: Sebastes umbrosus solute carrier family 45 member 3 (LOC119475566), mRNA. (4402 bp)
acaaacagacacttagacccggtaagggtcaaggtcaccgtgacctcacgtccgtcccattctggtgaaatctcaggaacgccttgagctaatttcttcaaatttggcagaaacttcctcttggaatcaaggatgaactcattagattttggtagtcaaaggtcaaggtcactgtgaccttacatccgtctcattctcatgaaagcattatctcaggaacactttgagcaaatgtcttcaaatttggtacaaacttccacttcgactcaaggttgaactgattaggtcaaaggtcactctgacctcacgtccgtcccattctagtgacatctcaggaacgccttcagcgaattccttcaaattttgcaccaacatccacttcaacaaggatgaacttattatattttgtttgatgaaggtcaaaggtcaccgtgactttacgactgtcccattctcgtgatattttgggatcgccttgatcaaatttcctcgaatttggcgtaaacatccatttcatcaaggtgaagtgattaaatttttttggttaaaggtcaaggtcaccatgacctcacactcgtcccattctcatgaaatcttggg...
position 2181 2281 2540 2804
XM_037748436.1 - Sebastes umbrosus (honeycomb rockfish) - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133185684 (LOC133185684), ncRNA. (389 bp)
method: Gnomon." /db_xref="GeneID:133185684" ncRNA 1..389 /ncRNA_class="lncRNA" /gene="LOC133185684" /product="uncharacterized LOC133185684" /db_xref="GeneID:133185684" ORIGIN // aaaaagacagttttttttaaatttcacttaaattaaaggtcacagtgaccttgaaataggttgcgacacaccttctacctaagatgcataaattggccaagtttgatgattctaagtctaatagttttctagttatgagccagacaggatatttccatatttggccataacatcttaattaaaggtcagagtgacctactttaaattgcgacacaccttctacccaagacgtatcagctgacaaagtttgataatcctaggcctaatagtattaaagttatgagccagacacgaaaaagctaacagacggacggaaggacatgaaggctataacataatacgtcctgtcttaagacgggcgtataaaaaatagttttcaaacaataaat
position 37 183
XR_009720934.1 - Saccostrea echinata - NCBI
PREDICTED: Ruditapes philippinarum uncharacterized LOC132740825 (LOC132740825), ncRNA. (1074 bp)
ctgtccgtccgtccgtctgttagcaatttggtttccggagcataacttaagttccatttggcccacaatattcaaacttcataggatgattgtccatattgggtagaagacccctattgattttggggtcataaggtcaaaggtcaaggtcactatgaccttaaaactgaaaacgttagcaatttggtttccggagcataacttaagttccatttggcccacaatattcaaacttcataggatgattgtccatattgggtagaagacccctattaattttggggtcatgaggtcaaaggtcaaggtcactatgaccttaaaactgaaaacagtttccggagcataacttaagttccatttggcccacagtgttcaaacttcataggatgattgtccatatttggtagaagacccctattgattttggggtcacaaggtcaaggtcactttgaccttaaaactgaaaacagtttccggagcataacttaagttccatttgtcctacagtgttcaaacttcataggatgattgtccatatttggtagaagacctctttagatttttgggtcaaaggtcaaggtcactatgaccttaaaactg...
position 212 506
XR_009627213.1 - Ruditapes philippinarum (Manila clam) - NCBI
PREDICTED: Haliotis rufescens uncharacterized LOC124143575 (LOC124143575), transcript variant X2, mRNA. (3073 bp)
ttcacttttttattatatatttaatctcatttcatgtgacagacatgcgactggagactccagcatctgatcgattgttctttttaatttcgctgcggttaaccgatacatattaacctcccaagaagacggagaagaaatgtttgttattttaacataaatgaaaggcgtctcttatacagatataaatatcccaaaatcccaagcaagtctgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaaagcgaggtcactgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaagacgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtaacctgctgtactggtctgatggcgaggtcactgtaacctgcagtactggtctgaaggcgaggtcactgt...
position 2225 2330
XM_046512601.2 - Haliotis rufescens (red abalone) - NCBI
PREDICTED: Haliotis rubra ephexin-1-like (LOC124257111), mRNA. (5672 bp)
tgtatattctgagttaatactatgtgaagattggacatggtcaagttcctttgatgcgtcaaggtacttggtgaatgtatgtgaggtcagtctgacctttgatgtgattggttaacagcatgtgaagatttaacaaggataagtacctatggtacgtggttgatgtatgtgaggtcagtctgacctttgatgtgattggttaacagtatgtgaagattaaacaaggataagtacctatggtacatggttggtgtatgtgaggtcactctgacctttgatgtgattggttaacagcatgtgaagattaaacaaggataagtacctatggtacatggttgatgtatgtgaggtcactctgacctttgatgtgattggttaacagcatgtgtaggttacacaaggggatgaatgactacagtcggtgtgacgtgtatgatgtgatcaaccaataccaacacggtgtgatgctgcatgagttggaattatggccatggtttgatcaaggtcagcttgacctcagagagtatggaactgggtcagcttgatctgagttttggaataagggcaactgctttaatgtttcttcaagtcatgtcagaa...
position 3154 3520 3763
XM_046691101.1 - Haliotis rubra (blacklip abalone) - NCBI
PREDICTED: Mya arenaria uncharacterized LOC128229709 (LOC128229709), transcript variant X1, mRNA. (2806 bp)
ctattcattttaaggttcttcgggtcaatggttaaggtcaaagtgacctttaatgatagaaggttgtcttagtgataactagacaatgcctgcaccaatggccctcaaacttgacttagaggttgggccgaggacccctctcgattttgggggtcatcaagtcaaaagtcaaggtcacagtgaccttgaaggcaaacttaacaattccttgaccaatggtcatcaaacttgacatgaaggttggccctgactagtagatgacccctattgatttttggggtcatctggataaagttcaaggtcagagtgacgttttatgcgaaaaagtaaacaaacctcccagtggtatctcaacaatgcctgaacagtagatgacaccttttgatattaggaatcatagggtcaaaggtcatggtcacagtgaccttaaatgcgaaaatgttcttagagtgataacttgacaatgcctgcacctttggccctcaaacttgacttgggggttgggcctgacctgtagatgaccccttttatttaaggggtcatcaaaggtcaaggtcacactgaccttgaactctgaaagcttttctgtgtgataaactg...
position 1089 1391 1909
XM_052941514.1 - Mya arenaria - NCBI
PREDICTED: Mya arenaria uncharacterized LOC128219708 (LOC128219708), transcript variant X2, ncRNA. (2528 bp)
ggtcaaggtcactgtgaccttgaggtgaagaaacagtttctgctcagtaactaaagaacgcttgcacccaggaacttcatacttggtatgctagtgggtcatgactagaagatgacccctattgattttggggtcactaggttaaagatcaaggtcaccctgatcttgaggtgaagaaactgtttccgctcaataactaaagatccttgggtctaggaacttcatacttggtatgctagttggtcatgactagtagatgactccaattgattttgagatcagtaggtcaaaggtcaaggtcaccctgaccttgaggtgaagaaacggtttcggctctataactaaataacgcttgcacccaggaacttcatacttggtatgctagttggtcatgactagtagatgactccaattgattttgagatcagtaggtcaaaggtcaaggtcaccctgaccttgaggtgaaggaacggtttccgctctataactaaataacgcttgcacccaggaacttcatacttggtatgctagttggtcatgactagtagatgactcctattgattttgagatcagtaggtcaaggtcaccatgaccttgag...
position 1510 1801 2086
XR_008258634.1 - Mya arenaria - NCBI
PREDICTED: Haliotis rufescens uncharacterized LOC124143575 (LOC124143575), transcript variant X1, mRNA. (3634 bp)
ttcacttttttattatatatttaatctcatttcatgtgacagacatgcgactggagactccagcatctgatcgattgttctttttaatttcgctgcggttaaccgatacatattaacctcccaagaagacggagaagaaatgtttgttattttaacataaatgaaaggcgtctcttatacagatataaatatcccaaaatcccaagcaagtctgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaaagcgaggtcactgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaagacgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtaacctgctgtactggtctgatggcgaggtcactgtaacctgcagtactggtctgaaggcgaggtcactgt...
position 2786 2891
XM_046512600.2 - Haliotis rufescens (red abalone) - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127875043 (LOC127875043), ncRNA. (315 bp)
LOC127875043" /product="uncharacterized LOC127875043" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:127875043" ORIGIN // ggtcaaggtcactgtgaccttaaatgttaaaatgttaaaattgttataactttggtatgcttggacatagagtcttcaaacttgacatgaaggtttgcaagcacacttagatgaccactggtcatttcaaggtcattcatttgaaggtcgaggtcactgtgaccttggatgtaaatatgttaaagttgttaatactttggtatgcttagacctagagtcttcaaacttgatatgaaggttggccagaactagtagatgaccactggtcattttaaggtcaaggtcaccgtgaccttgaatgtaaaaatgttaaaa
position 6 281
XR_008047228.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127859885 (LOC127859885), transcript variant X3, ncRNA. (3726 bp)
cggcgtgctcgaaaatgttaaagttcttatttcatggtataactttggtatgcttggacctagagtcttcaaacttgacatgaaggttggccaggattaacagatgaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttcaatataaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacaagaaggttggccataactagttagtaaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtg...atgaaacttcataggtacattgatcatgactggtagatgacccctattgattttcaggtcactaggtccaaggtcagggtgacctgaaatagtaaaatggttttcagatgataactcaagaacgcttatgcctagtatcatgaaactgcaaaggtacaacgatcatgactcgcagatgacccctattgattttcaggtcactaggtcaaaggttaaggtcacggtgacctgaaatagtaaaatggtttttggatgataactcaagaacgcttatgcctaggttcatgaaacttgataggt...
position 150 3075 3220
XR_008039512.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127859885 (LOC127859885), transcript variant X2, ncRNA. (3735 bp)
cggcgtgctcgaaaatgttaaagttcttatttcatggtataactttggtatgcttggacctagagtcttcaaacttgacatgaaggttggccaggattaacagatgaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttcaatataaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacaagaaggttggccataactagttagtaaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtg...atgaaacttcataggtacattgatcatgactggtagatgacccctattgattttcaggtcactaggtccaaggtcagggtgacctgaaatagtaaaatggttttcagatgataactcaagaacgcttatgcctagtatcatgaaactgcaaaggtacaacgatcatgactcgcagatgacccctattgattttcaggtcactaggtcaaaggttaaggtcacggtgacctgaaatagtaaaatggtttttggatgataactcaagaacgcttatgcctaggttcatgaaacttgataggt...
position 150 3084 3229
XR_008039511.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127859885 (LOC127859885), transcript variant X1, ncRNA. (3580 bp)
cggcgtgctcgaaaatgttaaagttcttatttcatggtataactttggtatgcttggacctagagtcttcaaacttgacatgaaggttggccaggattaacagatgaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttcaatataaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacaagaaggttggccataactagttagtaaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtg...atgaaacttcataggtacattgatcatgactggtagatgacccctattgattttcaggtcactaggtccaaggtcagggtgacctgaaatagtaaaatggttttcagatgataactcaagaacgcttatgcctagtatcatgaaactgcaaaggtacaacgatcatgactcgcagatgacccctattgattttcaggtcactaggtcaaaggttaaggtcacggtgacctgaaatagtaaaatggtttttggatgataactcaagaacgcttatgcctaggttcatgaaacttgataggt...
position 150 2929 3074
XR_008039510.1 - Dreissena polymorpha - NCBI
PREDICTED: Mya arenaria uncharacterized LOC128219708 (LOC128219708), transcript variant X1, ncRNA. (2673 bp)
ggtcaaggtcactgtgaccttgaggtgaagaaacagtttctgctcagtaactaaagaacgcttgcacccaggaacttcatacttggtatgctagtgggtcatgactagaagatgacccctattgattttggggtcactaggttaaagatcaaggtcaccctgatcttgaggtgaagaaactgtttccgctcaataactaaagatccttgggtctaggaacttcatacttggtatgctagttggtcatgactagtagatgactccaattgattttgagatcagtaggtcaaaggtcaaggtcaccctgaccttgaggtgaagaaacggtttcggctctataactaaataacgcttgcacccaggaacttcatacttggtatgctagttggtcatgactagtagatgactccaattgattttgagatcagtaggtcaaaggtcaaggtcaccctgaccttgaggtgaaggaacggtttccgctctataactaaataacgcttgcacccaggaacttcatacttggtatgctagttggtcatgactagtagatgactcctattgattttgagatcagtaggtcaaggtcaccatgaccttgag...
position 1655 1946 2231
XR_008258633.1 - Mya arenaria - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC130047798 (LOC130047798), ncRNA. (2314 bp)
catcaactgacaaagtttgatgattgtaagtcaaatggtatctgaaatattcaaatatagccgccaaaatccaaaaataggtcacggtgacctacattttaggcaacacaatctgaagactcaacatgcattaactgacaaagtttgataattgtaagtcaaatagtatctgaaatattaaaatataggcgtcaaattccaaaagtaggtcacggtgatctactatttggtcaacaaactatgaagactcaagatgcatcaactgacaaagtttgatgatcctagctttcatagtgtccaaaatatgcatctaaaattgaaaatgtgaaatttgaatgtctgcaaaattcaaaaagtaggtcactgtgacctacttttttttttataaatatgtttcgaggcctctagacgcatcaacttacatgatttgatgattataaacctctcaatatctgaaataacaacctaaaatgtattcataaatgattagccataaaattcagaaagtaggtcatggtgacctacttttcacatgacgcagttgaaggtcctatgttccatcaactgacaacttttgatgatcatacgctcaaaagtgtc...
position 648 927 1078
XR_008796613.1 - Ostrea edulis - NCBI
PREDICTED: Pecten maximus PDZ domain-containing protein 11-like (LOC117329806), mRNA. (2474 bp)
ctggcacgtccttaaatgaccctggctgttaataggacgttatgcaaaaacaaccccaaaaatacaaacctcatgtactacatataactggtagtttatacagtaattagggcattggttcatctaggtcatgtataccagaaataggtcactctgacctatattttgacatttgatcttcattacagaatctgatgaagtttgtcaggtctttattctctacattctgcttgtaactggaacttggagcatcgtttgacctagatgaggtggtgtgtcatgtatcaaaattaggtcattgtgacctacattttgatatttgatctacattacagatacagtttgtcagggttctattttcttcaatctacttatcactggaactttgtacttggggcatggttcaacatatatgaggtggtgtgtcatgtatcaaaagtaggtcactttgacctacattttgaattttgacctacatcaaagaaaaggtctgtctgttcataggatatgatttacatttgacggggaactgtgatttgccagctattcttgtttacattaatcttgttttttttttcaattaattacaccagatgtatc...
position 1876 2023 2171
XM_033887958.1 - Pecten maximus - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/iub%3aAGGTCANNNTGACCT
lang : en | div : | spe : | query_string : iub:AGGTCANNNTGACCT | format : html | download : 

0.000 | 0.000 | search_start;
0.124 | 0.124 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:AGGTCAAAATGACCT)%7C(nt:AGGTCAAATTGACCT)%7C(nt:AGGTCAAAGTGACCT)%7C(nt:AGGTCAAACTGACCT)%7C(nt:AGGTCAATATGACCT)%7C(nt:AGGTCAATTTGACCT)%7C(nt:AGGTCAATGTGACCT)%7C(nt:AGGTCAATCTGACCT)%7C(nt:AGGTCAAGATGACCT)%7C(nt:AGGTCAAGTTGACCT)%7C(nt:AGGTCAAGGTGACCT)%7C(nt:AGGTCAAGCTGACCT)%7C(nt:AGGTCAACATGACCT)%7C(nt:AGGTCAACTTGACCT)%7C(nt:AGGTCAACGTGACCT)%7C(nt:AGGTCAACCTGACCT)%7C(nt:AGGTCATAATGACCT)%7C(nt:AGGTCATATTGACCT)%7C(nt:AGGTCATAGTGACCT)%7C(nt:AGGTCATACTGACCT)%7C(nt:AGGTCATTATGACCT)%7C(nt:AGGTCATTTTGACCT)%7C(nt:AGGTCATTGTGACCT)%7C(nt:AGGTCATTCTGACCT)%7C(nt:AGGTCATGATGACCT)%7C(nt:AGGTCATGTTGACCT)%7C(nt:AGGTCATGGTGACCT)%7C(nt:AGGTCATGCTGACCT)%7C(nt:AGGTCATCATGACCT)%7C(nt:AGGTCATCTTGACCT)%7C(nt:AGGTCATCGTGACCT)%7C(nt:AGGTCATCCTGACCT)%7C(nt:AGGTCAGAATGACCT)%7C(nt:AGGTCAGATTGACCT)%7C(nt:AGGTCAGAGTGACCT)%7C(nt:AGGTCAGACTGACCT)%7C(nt:AGGTCAGTATGACCT)%7C(nt:AGGTCAGTTTGACCT)%7C(nt:AGGTCAGTGTGACCT)%7C(nt:AGGTCAGTCTGACCT)%7C(nt:AGGTCAGGATGACCT)%7C(nt:AGGTCAGGTTGACCT)%7C(nt:AGGTCAGGGTGACCT)%7C(nt:AGGTCAGGCTGACCT)%7C(nt:AGGTCAGCATGACCT)%7C(nt:AGGTCAGCTTGACCT)%7C(nt:AGGTCAGCGTGACCT)%7C(nt:AGGTCAGCCTGACCT)%7C(nt:AGGTCACAATGACCT)%7C(nt:AGGTCACATTGACCT)%7C(nt:AGGTCACAGTGACCT)%7C(nt:AGGTCACACTGACCT)%7C(nt:AGGTCACTATGACCT)%7C(nt:AGGTCACTTTGACCT)%7C(nt:AGGTCACTGTGACCT)%7C(nt:AGGTCACTCTGACCT)%7C(nt:AGGTCACGATGACCT)%7C(nt:AGGTCACGTTGACCT)%7C(nt:AGGTCACGGTGACCT)%7C(nt:AGGTCACGCTGACCT)%7C(nt:AGGTCACCATGACCT)%7C(nt:AGGTCACCTTGACCT)%7C(nt:AGGTCACCGTGACCT)%7C(nt:AGGTCACCCTGACCT))?to=0&format=json
0.812 | 0.688 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:AGGTCAAAATGACCT)%7C(nt:AGGTCAAATTGACCT)%7C(nt:AGGTCAAAGTGACCT)%7C(nt:AGGTCAAACTGACCT)%7C(nt:AGGTCAATATGACCT)%7C(nt:AGGTCAATTTGACCT)%7C(nt:AGGTCAATGTGACCT)%7C(nt:AGGTCAATCTGACCT)%7C(nt:AGGTCAAGATGACCT)%7C(nt:AGGTCAAGTTGACCT)%7C(nt:AGGTCAAGGTGACCT)%7C(nt:AGGTCAAGCTGACCT)%7C(nt:AGGTCAACATGACCT)%7C(nt:AGGTCAACTTGACCT)%7C(nt:AGGTCAACGTGACCT)%7C(nt:AGGTCAACCTGACCT)%7C(nt:AGGTCATAATGACCT)%7C(nt:AGGTCATATTGACCT)%7C(nt:AGGTCATAGTGACCT)%7C(nt:AGGTCATACTGACCT)%7C(nt:AGGTCATTATGACCT)%7C(nt:AGGTCATTTTGACCT)%7C(nt:AGGTCATTGTGACCT)%7C(nt:AGGTCATTCTGACCT)%7C(nt:AGGTCATGATGACCT)%7C(nt:AGGTCATGTTGACCT)%7C(nt:AGGTCATGGTGACCT)%7C(nt:AGGTCATGCTGACCT)%7C(nt:AGGTCATCATGACCT)%7C(nt:AGGTCATCTTGACCT)%7C(nt:AGGTCATCGTGACCT)%7C(nt:AGGTCATCCTGACCT)%7C(nt:AGGTCAGAATGACCT)%7C(nt:AGGTCAGATTGACCT)%7C(nt:AGGTCAGAGTGACCT)%7C(nt:AGGTCAGACTGACCT)%7C(nt:AGGTCAGTATGACCT)%7C(nt:AGGTCAGTTTGACCT)%7C(nt:AGGTCAGTGTGACCT)%7C(nt:AGGTCAGTCTGACCT)%7C(nt:AGGTCAGGATGACCT)%7C(nt:AGGTCAGGTTGACCT)%7C(nt:AGGTCAGGGTGACCT)%7C(nt:AGGTCAGGCTGACCT)%7C(nt:AGGTCAGCATGACCT)%7C(nt:AGGTCAGCTTGACCT)%7C(nt:AGGTCAGCGTGACCT)%7C(nt:AGGTCAGCCTGACCT)%7C(nt:AGGTCACAATGACCT)%7C(nt:AGGTCACATTGACCT)%7C(nt:AGGTCACAGTGACCT)%7C(nt:AGGTCACACTGACCT)%7C(nt:AGGTCACTATGACCT)%7C(nt:AGGTCACTTTGACCT)%7C(nt:AGGTCACTGTGACCT)%7C(nt:AGGTCACTCTGACCT)%7C(nt:AGGTCACGATGACCT)%7C(nt:AGGTCACGTTGACCT)%7C(nt:AGGTCACGGTGACCT)%7C(nt:AGGTCACGCTGACCT)%7C(nt:AGGTCACCATGACCT)%7C(nt:AGGTCACCTTGACCT)%7C(nt:AGGTCACCGTGACCT)%7C(nt:AGGTCACCCTGACCT))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.889 | 0.077 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]