ver.2
Help
|
Advanced search
|
Japanese
Previous release (v1)
2024-11-23 01:13:32, GGRNA : RefSeq release 226 (Sep, 2024)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
LOCUS NM_001024889 829 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus reproductive homeobox 4G (Rhox4g), mRNA. ACCESSION NM_001024889 XM_233314 VERSION NM_001024889.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ058652.1. On Jun...
LOCUS NM_001025776 738 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus reproductive homeobox 8 (Rhox8), mRNA. ACCESSION NM_001025776 XM_578961 VERSION NM_001025776.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ058655.1. On Jul 22, 2005...
LOCUS NM_001135607 908 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus reproductive homeobox on X chromosome 3 (Rhox3), mRNA. ACCESSION NM_001135607 VERSION NM_001135607.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ058651.1. ##Evidence-...
LOCUS NM_001433273 718 bp mRNA linear ROD 08-AUG-2024 DEFINITION Rattus norvegicus reproductive homeobox 9 like 1 (Rhox9l1), transcript variant 2, mRNA. ACCESSION NM_001433273 VERSION NM_001433273.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
LOCUS NM_001106303 1497 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus H6 family homeobox 2 (Hmx2), mRNA. ACCESSION NM_001106303 XM_001054069 XM_215056 VERSION NM_001106303.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473953.1. On or before...
LOCUS NM_001106302 1362 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus H6 family homeobox 3 (Hmx3), mRNA. ACCESSION NM_001106302 XM_001054019 XM_219327 VERSION NM_001106302.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from...
LOCUS NM_001433272 850 bp mRNA linear ROD 11-AUG-2024 DEFINITION Rattus norvegicus reproductive homeobox 9 like 1 (Rhox9l1), transcript variant 1, mRNA. ACCESSION NM_001433272 XM_006257483 VERSION NM_001433272.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was...
END## FEATURES Location/Qualifiers source 1..843 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="7" /map="7q36" gene 1..843 /gene="Hoxc12" /note="homeo box C12" /db_xref="GeneID:300262" /db_xref="RGD:1310539" CDS 1..843 /gene="Hoxc12" /codon_start=1 /product="homeobox protein Hox-C12" /protein_id="NP_001100266.1" /db_xref="GeneID:300262" /db_xref="RGD:1310539" /translation="...
LOCUS NM_001108880 1372 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus BARX homeobox 1 (Barx1), mRNA. ACCESSION NM_001108880 XM_001056986 XM_344575 VERSION NM_001108880.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473977.1....
map="7q36" gene 1..1680 /gene="Hoxc6" /note="homeo box C6" /db_xref="GeneID:252885" /db_xref="RGD:620626" exon 1..527 /gene="Hoxc6" /inference="alignment:Splign:2.1.0" misc_feature 47..49 /gene="Hoxc6" /note="upstream in-frame stop codon" CDS 128..835 /gene="Hoxc6" /codon_start=1 /product="homeobox protein Hox-C6" /protein_id="NP_001385447.1" /db_xref="GeneID:252885" /db_xref="RGD:620626" /translation="...
LOCUS NM_001077674 2141 bp mRNA linear ROD 02-JUN-2024 DEFINITION Rattus norvegicus H2.0-like homeobox (Hlx), mRNA. ACCESSION NM_001077674 XM_001064868 XM_344184 VERSION NM_001077674.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC127513.1....
LOCUS NM_001024901 772 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus Rhox homeobox family member 12 (Rhox12), mRNA. ACCESSION NM_001024901 XM_343757 VERSION NM_001024901.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from...
LOCUS NM_001433432 1056 bp mRNA linear ROD 21-AUG-2024 DEFINITION Rattus norvegicus TGFB-induced factor homeobox 2-like, X-linked 2 (Tgif2lx2), mRNA. ACCESSION NM_001433432 XM_056985152 VERSION NM_001433432.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was...
Splign:2.1.0" misc_feature 33..35 /gene="Hoxc5" /note="upstream in-frame stop codon" CDS 75..743 /gene="Hoxc5" /codon_start=1 /product="homeobox protein Hox-C5" /protein_id="NP_001101586.1" /db_xref="GeneID:315341" /db_xref="RGD:1307584" /translation="...inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2734) AUTHORS Moon SM, Ahn MY, Kwon SM, Kim SA, Ahn SG and Yoon JH. TITLE Homeobox C5 expression is associated with the progression of 4-nitroquinoline 1-oxide-induced rat tongue carcinogenesis JOURNAL J Oral Pathol Med...
LOCUS NM_001109244 816 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus ladybird homeobox 2 (Lbx2), mRNA. ACCESSION NM_001109244 XM_001072452 XM_575575 VERSION NM_001109244.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from...
LOCUS NM_001102413 2490 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus iroquois homeobox 6 (Irx6), mRNA. ACCESSION NM_001102413 XM_001064772 XM_226359 VERSION NM_001102413.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata;...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1224..1340 /gene="Irx6" /gene_synonym="RGD1564830" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 786..1034 /gene="Irx6" /gene_synonym="RGD1564830" /inference="alignment:...
LOCUS NM_001432018 1380 bp mRNA linear ROD 24-JUL-2024 DEFINITION Rattus norvegicus developing brain homeobox 2 (Dbx2), transcript variant 2, mRNA. ACCESSION NM_001432018 XM_006242286 VERSION NM_001432018.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
LOCUS NM_001432286 3767 bp mRNA linear ROD 30-JUL-2024 DEFINITION Rattus norvegicus mohawk homeobox (Mkx), transcript variant 2, mRNA. ACCESSION NM_001432286 XM_008771811 VERSION NM_001432286.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ0117.1. On...
LOCUS NM_001432285 3721 bp mRNA linear ROD 31-JUL-2024 DEFINITION Rattus norvegicus mohawk homeobox (Mkx), transcript variant 1, mRNA. ACCESSION NM_001432285 XM_017600733 VERSION NM_001432285.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
LOCUS NM_001109166 2000 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus T-cell leukemia, homeobox 1 (Tlx1), mRNA. ACCESSION NM_001109166 XM_001057997 XM_574674 VERSION NM_001109166.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from...
LOCUS NM_001134983 2908 bp mRNA linear ROD 14-JUL-2024 DEFINITION Rattus norvegicus TGFB-induced factor homeobox 2 (Tgif2), mRNA. ACCESSION NM_001134983 XM_001067005 XM_575274 VERSION NM_001134983.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus...; other site" /db_xref="CDD:238039" misc_feature 327..443 /gene="Tgif2" /gene_synonym="RGD1560115; RGD1564927; Tgif2l1" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 411..2885 /gene="Tgif2" /gene_synonym="RGD1560115; RGD1564927; Tgif2l1" /inference="...
LOCUS NM_001107837 3421 bp mRNA linear ROD 12-JUN-2024 DEFINITION Rattus norvegicus LIM homeobox 6 (Lhx6), mRNA. ACCESSION NM_001107837 XM_001079382 XM_231175 VERSION NM_001107837.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ013.1. On...
LOCUS NM_001432017 1476 bp mRNA linear ROD 27-JUL-2024 DEFINITION Rattus norvegicus developing brain homeobox 2 (Dbx2), transcript variant 1, mRNA. ACCESSION NM_001432017 XM_001053826 VERSION NM_001432017.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was...
LOCUS NM_001271274 1857 bp mRNA linear ROD 30-JUL-2024 DEFINITION Rattus norvegicus motor neuron and pancreas homeobox 1 (Mnx1), mRNA. ACCESSION NM_001271274 XM_001059733 XM_003749670 VERSION NM_001271274.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was...
LOCUS NM_001433002 2012 bp mRNA linear ROD 23-AUG-2024 DEFINITION Rattus norvegicus double homeobox 4 (Dux4), mRNA. ACCESSION NM_001433002 VERSION NM_001433002.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ0116.1. ##Evidence-Data-START...
LOCUS NM_001127653 1468 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus NK2 homeobox 6 (Nkx2-6), mRNA. ACCESSION NM_001127653 XM_001068954 XM_344429 VERSION NM_001127653.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC160896.1....
map="10q26" gene 1..1235 /gene="Hoxb7" /gene_synonym="Hox2r1b; R1b" /note="homeo box B7" /db_xref="GeneID:497985" /db_xref="RGD:1559918" exon 1..419 /gene="Hoxb7" /gene_synonym="Hox2r1b; R1b" /inference="alignment:Splign:2.1.0" CDS 20..679 /gene="Hoxb7" /gene_synonym="Hox2r1b; R1b" /note="homeobox gene B7; homeobox protein R1B" /codon_start=1 /product="homeobox protein Hox-B7" /protein_id="NP_001017480.1" /db_xref="GeneID:497985" /db_xref="RGD:1559918" /translation="...
LOCUS NM_001433385 1292 bp mRNA linear ROD 15-AUG-2024 DEFINITION Rattus norvegicus POU class 2 homeobox associating factor 2 (Pou2af2), mRNA. ACCESSION NM_001433385 XM_008766355 VERSION NM_001433385.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
LOCUS NM_001271279 3228 bp mRNA linear ROD 07-MAY-2024 DEFINITION Rattus norvegicus PBX/knotted 1 homeobox 2 (Pknox2), transcript variant 2, mRNA. ACCESSION NM_001271279 VERSION NM_001271279.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa;...misc_feature 621..878 /gene="Pknox2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1200..1214,1218..1220,1278..1280,1296..1298, 1335..1337,1341..1346,1353..1358,1362..1370) /gene="Pknox2" /note="DNA binding site...
LOCUS NM_001127373 4263 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus ADNP homeobox 2 (Adnp2), mRNA. ACCESSION NM_001127373 XM_001057780 XM_225732 VERSION NM_001127373.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC166606.1. On or before May...
LOCUS NM_001271278 3096 bp mRNA linear ROD 07-MAY-2024 DEFINITION Rattus norvegicus PBX/knotted 1 homeobox 2 (Pknox2), transcript variant 1, mRNA. ACCESSION NM_001271278 XM_003750468 XM_003754405 XM_003754406 XM_003754407 XM_003754408 XM_003754409 VERSION NM_001271278.1 KEYWORDS RefSeq; RefSeq...carrier protein of acetyl-CoA carboxylase; Region: PLN02983" /db_xref="CDD:215533" misc_feature 489..746 /gene="Pknox2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order...
LOCUS NM_001047108 1164 bp mRNA linear ROD 27-JUL-2024 DEFINITION Rattus norvegicus ladybird homeobox 1 (Lbx1), mRNA. ACCESSION NM_001047108 XM_001058110 XM_574675 VERSION NM_001047108.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from...
LOCUS NM_001107594 1472 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus NK2 homeobox 3 (Nkx2-3), mRNA. ACCESSION NM_001107594 XM_001056222 XM_219880 VERSION NM_001107594.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473986.1....
LOCUS NM_001109455 1881 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus NK6 homeobox 3 (Nkx6-3), mRNA. ACCESSION NM_001109455 XM_001062306 VERSION NM_001109455.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473970.2. On Oct...
LOCUS NM_145767 2403 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus dorsal root ganglia homeobox (Drgx), mRNA. ACCESSION NM_145767 VERSION NM_145767.2 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata;...REFERENCE 1 (bases 1 to 2403) AUTHORS Ito,T., Sakai,A., Maruyama,M., Miyagawa,Y., Okada,T., Fukayama,H. and Suzuki,H. TITLE Dorsal Root Ganglia Homeobox downregulation in primary sensory neurons contributes to neuropathic pain in rats JOURNAL Mol Pain 16, 1744806920904462 (2020) PUBMED 32000573...
LOCUS NM_001433158 1530 bp mRNA linear ROD 09-AUG-2024 DEFINITION Rattus norvegicus ESX homeobox 1 (Esx1), mRNA. ACCESSION NM_001433158 XM_039100644 VERSION NM_001433158.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ0121.1. On Aug...
LOCUS NM_001109106 1148 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus HESX homeobox 1 (Hesx1), mRNA. ACCESSION NM_001109106 XM_001057775 XM_573850 VERSION NM_001109106.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474067.2....
map="3q23" gene 1..1830 /gene="Hoxd1" /note="homeo box D1" /db_xref="GeneID:288151" /db_xref="RGD:1309179" exon 1..756 /gene="Hoxd1" /inference="alignment:Splign:2.1.0" misc_feature 60..62 /gene="Hoxd1" /note="upstream in-frame stop codon" CDS 105..1091 /gene="Hoxd1" /codon_start=1 /product="homeobox protein Hox-D1" /protein_id="NP_001099354.1" /db_xref="GeneID:288151" /db_xref="RGD:1309179" /translation="...
LOCUS NM_001109546 2814 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus visual system homeobox 1 (Vsx1), mRNA. ACCESSION NM_001109546 XM_001071714 VERSION NM_001109546.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474050.2. On...
LOCUS NM_001426997 2165 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus LIM homeobox 3 (Lhx3), mRNA. ACCESSION NM_001426997 XM_002729144 VERSION NM_001426997.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ013.1. On Jan...
LOCUS NM_022956 1577 bp mRNA linear ROD 05-JUN-2024 DEFINITION Rattus norvegicus BarH-like homeobox 2 (Barhl2), mRNA. ACCESSION NM_022956 VERSION NM_022956.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB004056.1. On Aug 31, 2012 this...
LOCUS NM_001106732 1078 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus NK2 homeobox 8 (Nkx2-8), mRNA. ACCESSION NM_001106732 XM_001079326 XM_234179 VERSION NM_001106732.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473947.1....
LOCUS NM_001431422 2343 bp mRNA linear ROD 16-JUL-2024 DEFINITION Rattus norvegicus orthodenticle homeobox 2 (Otx2), transcript variant 2, mRNA. ACCESSION NM_001431422 XM_039093285 VERSION NM_001431422.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota;...gene="Otx2" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2343) AUTHORS Rohde,K., Hertz,H. and Rath,M.F. TITLE Homeobox genes in melatonin-producing pinealocytes: Otx2 and Crx act to promote hormone synthesis in the mature rat pineal gland JOURNAL J Pineal Res 66 (4),...
inference="alignment:Splign:2.1.0" exon 510..1008 /gene="Hoxd4" /inference="alignment:Splign:2.1.0" exon 1009..1838 /gene="Hoxd4" /inference="alignment:Splign:2.1.0" misc_feature 1250..1252 /gene="Hoxd4" /note="upstream in-frame stop codon" CDS 1412..2167 /gene="Hoxd4" /codon_start=1 /product="homeobox protein Hox-D4" /protein_id="NP_001099355.1" /db_xref="GeneID:288153" /db_xref="RGD:1309690" /translation="...
LOCUS NM_001129878 2253 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus homeobox A11 (Hoxa11), mRNA. ACCESSION NM_001129878 XM_001059505 VERSION NM_001129878.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474011.2. On Jul...
LOCUS NM_133621 1070 bp mRNA linear ROD 19-AUG-2024 DEFINITION Rattus norvegicus HOP homeobox (Hopx), mRNA. ACCESSION NM_133621 VERSION NM_133621.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ0114.1. On Nov 25, 2020 this sequence...
misc_feature 391..507 /gene="Irx5" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature <667..1233 /gene="Irx5" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" exon 1..246 /gene="Irx5" /inference="alignment:Splign:2.1.0" exon 247..652 /gene="Irx5" /inference="alignment:Splign:2.1.0" exon 653..1455 /gene="Irx5" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1455) AUTHORS Liu D, Pattabiraman V, Bacanamwo M and Anderson LM. TITLE Iroquois homeobox transcription factor (Irx5) promotes G1/S-...
LOCUS NM_001431421 2192 bp mRNA linear ROD 18-JUL-2024 DEFINITION Rattus norvegicus orthodenticle homeobox 2 (Otx2), transcript variant 1, mRNA. ACCESSION NM_001431421 XM_006251838 VERSION NM_001431421.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus...gene="Otx2" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2192) AUTHORS Rohde,K., Hertz,H. and Rath,M.F. TITLE Homeobox genes in melatonin-producing pinealocytes: Otx2 and Crx act to promote hormone synthesis in the mature rat pineal gland JOURNAL J Pineal Res 66 (4),...
LOCUS NM_001100566 2339 bp mRNA linear ROD 16-JUL-2024 DEFINITION Rattus norvegicus orthodenticle homeobox 2 (Otx2), transcript variant 3, mRNA. ACCESSION NM_001100566 XM_001057814 XM_001073859 XM_224009 VERSION NM_001100566.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus...gene="Otx2" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2339) AUTHORS Rohde,K., Hertz,H. and Rath,M.F. TITLE Homeobox genes in melatonin-producing pinealocytes: Otx2 and Crx act to promote hormone synthesis in the mature rat pineal gland JOURNAL J Pineal Res 66 (4),...
LOCUS NM_013109 2839 bp mRNA linear ROD 02-MAY-2024 DEFINITION Rattus norvegicus orthodenticle homeobox 1 (Otx1), mRNA. ACCESSION NM_013109 XM_039091639 VERSION NM_013109.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ0114.1. On or...
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/en/rn/homeobox
lang : en |
div : |
spe : rn |
query_string : homeobox |
format : html |
download :
0.000 | 0.000 | search_start;
0.208 | 0.208 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.373 | 0.165 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.378 | 0.005 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]