GGRNA | Results

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Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), mRNA. (4129 bp)

single sample supports all introns SAMN04111056, SAMN04111070 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..4129 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="2L" /map="2L" gene 1..4129 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog" /db_xref="GeneID:734630" /db_xref="Xenbase:XB-GENE-1006885" exon 1..105 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /inference="alignment:Splign:2.1.0" CDS 21..2675 /gene="ago4.L" /gene_synonym="ago4;...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
NM_001096105.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), transcript variant X2, mRNA. (8762 bp)

source 1..8762 /organism="Xenopus laevis" /mol_type="mRNA" /strain="J_2021" /db_xref="taxon:8355" /chromosome="2L" /sex="female" /tissue_type="Erythrocytes" /dev_stage="adult" /collection_date="06-Jul-2016" /collected_by="Jessica Lyons" gene 1..8762 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
XM_041581103.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), transcript variant X1, mRNA. (8830 bp)

source 1..8830 /organism="Xenopus laevis" /mol_type="mRNA" /strain="J_2021" /db_xref="taxon:8355" /chromosome="2L" /sex="female" /tissue_type="Erythrocytes" /dev_stage="adult" /collection_date="06-Jul-2016" /collected_by="Jessica Lyons" gene 1..8830 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq...

Synonym: ago4; argonaute-4; Argonaute4; eif2c4
XM_041581102.1 - Xenopus laevis (African clawed frog) - NCBI

Xenopus tropicalis argonaute 2, RISC catalytic component (ago2), mRNA. (3687 bp)

single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3687 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="6" /map="6" gene 1..3687 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="argonaute 2, RISC catalytic component" /db_xref="GeneID:448205" /db_xref="Xenbase:XB-GENE-1001916" exon 1..260 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /inference="alignment:Splign:2.1.0" misc_feature 122..124 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="upstream in-frame stop...

Synonym: Argonaute2; eif2c2
NM_001004877.1 - Xenopus tropicalis (tropical clawed frog) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X3, mRNA. (6235 bp)

misc_feature 45..299 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 330..482 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 483..845 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_...

XM_056122744.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X4, mRNA. (6518 bp)

misc_feature 328..582 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 613..765 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 766..1128 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122745.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (6788 bp)

misc_feature 598..852 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 883..1035 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1036..1398 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122743.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 2 (AGO2), mRNA. (3877 bp)

misc_feature 423..647 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 675..827 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 828..1190 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056110923.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Danio rerio argonaute RISC catalytic component 3b (ago3b), transcript variant X1, mRNA. (8295 bp)

Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8295 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" gene 1..8295 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
XM_005159456.3 - Danio rerio (zebrafish) - NCBI - UCSC

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (6685 bp)

misc_feature 360..749 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 780..932 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 933..1295 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122742.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Eurytemora carolleeae protein argonaute-2 (LOC111704341), mRNA. (2876 bp)

misc_feature 568..957 /gene="LOC111704341" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 985..1137 /gene="LOC111704341" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1138..1446 /gene="LOC111704341" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_023476568.1 - Eurytemora carolleeae - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (5217 bp)

misc_feature 333..617 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 645..797 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 798..1160 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122746.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 1 (AGO1), transcript variant X1, mRNA. (7350 bp)

misc_feature 315..707 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 735..887 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 888..1250 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122750.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Globicephala melas argonaute RISC catalytic component 3 (AGO3), mRNA. (5795 bp)

misc_feature 475..759 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 787..939 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 940..1302 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_030869363.2 - Globicephala melas (long-finned pilot whale) - NCBI

PREDICTED: Zootoca vivipara argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (5989 bp)

misc_feature 259..486 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 514..666 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 667..1029 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_035125351.2 - Zootoca vivipara (common lizard) - NCBI

Danio rerio argonaute RISC catalytic component 3b (ago3b), mRNA. (3062 bp)

c 2954-3062 BX005424.10 157442-157550 c FEATURES Location/Qualifiers source 1..3062 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" /map="19" gene 1..3062 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452" exon 1..498 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /inference="alignment:Splign:2.1.0" misc_feature 477..479 /gene="ago3b" /gene_synonym="ago3;...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
NM_001160028.1 - Danio rerio (zebrafish) - NCBI - UCSC

PREDICTED: Globicephala melas protein argonaute-4 (LOC115860046), mRNA. (3635 bp)

misc_feature 125..514 /gene="LOC115860046" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 545..697 /gene="LOC115860046" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 698..1060 /gene="LOC115860046" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_030869431.2 - Globicephala melas (long-finned pilot whale) - NCBI

PREDICTED: Pantherophis guttatus protein argonaute-3 (LOC117663333), mRNA. (6363 bp)

misc_feature 606..890 /gene="LOC117663333" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 918..1070 /gene="LOC117663333" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1071..1433 /gene="LOC117663333" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_034413419.1 - Pantherophis guttatus - NCBI

PREDICTED: Zootoca vivipara argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (7386 bp)

misc_feature 559..948 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 979..1131 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1132..1494 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_035118310.2 - Zootoca vivipara (common lizard) - NCBI

PREDICTED: Pantherophis guttatus argonaute RISC catalytic component 2 (AGO2), mRNA. (3908 bp)

misc_feature 299..556 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 584..736 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 737..1099 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_034436040.1 - Pantherophis guttatus - NCBI

PREDICTED: Eurytemora carolleeae protein argonaute-4 (LOC111715445), transcript variant X2, mRNA. (2604 bp)

misc_feature 394..627 /gene="LOC111715445" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 655..807 /gene="LOC111715445" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 811..1164 /gene="LOC111715445" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_023490768.1 - Eurytemora carolleeae - NCBI

PREDICTED: Zootoca vivipara argonaute RISC catalytic component 2 (AGO2), transcript variant X2, mRNA. (6360 bp)

misc_feature 633..857 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 885..1037 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1038..1400 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_035125350.2 - Zootoca vivipara (common lizard) - NCBI

PREDICTED: Zootoca vivipara argonaute RISC catalytic component 2 (AGO2), transcript variant X1, mRNA. (6363 bp)

misc_feature 633..860 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 888..1040 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1041..1403 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_035125349.2 - Zootoca vivipara (common lizard) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (4538 bp)

misc_feature 140..481 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(275..277,320..322,362..364,374..376,428..430, 449..451,455..457) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 614..1891 /gene="AGO3" /note="PIWI...

XM_056122749.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (4564 bp)

misc_feature 166..507 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(301..303,346..348,388..390,400..402,454..456, 475..477,481..483) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 640..1917 /gene="AGO3" /note="PIWI...

XM_056122748.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (4690 bp)

misc_feature 292..633 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(427..429,472..474,514..516,526..528,580..582, 601..603,607..609) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 766..2043 /gene="AGO3" /note="PIWI...

XM_056122747.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Danio rerio argonaute RISC catalytic component 3b (ago3b), transcript variant X2, mRNA. (2336 bp)

Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2336 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" gene 1..2336 /gene="ago3b" /gene_synonym="ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples...

Synonym: ago3; Argonaute3; eif2c3; eif2c3b; sb:eu332; si:dkey-3n22.3
XM_009294054.3 - Danio rerio (zebrafish) - NCBI - UCSC

PREDICTED: Erinaceus europaeus argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (7478 bp)

misc_feature 351..743 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 771..923 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 924..1286 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_007533088.2 - Erinaceus europaeus (western European hedgehog) - NCBI

PREDICTED: Eurytemora carolleeae protein argonaute-4 (LOC111715445), transcript variant X1, mRNA. (3540 bp)

XM_023490767.1 - Eurytemora carolleeae - NCBI

PREDICTED: Pantherophis guttatus protein argonaute-1 (LOC117663335), transcript variant X2, mRNA. (2761 bp)

misc_feature 210..602 /gene="LOC117663335" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 630..782 /gene="LOC117663335" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 783..1145 /gene="LOC117663335" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_034413422.2 - Pantherophis guttatus - NCBI

PREDICTED: Pantherophis guttatus protein argonaute-1 (LOC117663335), transcript variant X1, mRNA. (2764 bp)

misc_feature 213..605 /gene="LOC117663335" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 633..785 /gene="LOC117663335" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 786..1148 /gene="LOC117663335" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_034413421.2 - Pantherophis guttatus - NCBI

PREDICTED: Zootoca vivipara protein argonaute-1 (LOC118086560), transcript variant X1, mRNA. (6669 bp)

misc_feature 245..637 /gene="LOC118086560" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 665..817 /gene="LOC118086560" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 818..1180 /gene="LOC118086560" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_035118315.2 - Zootoca vivipara (common lizard) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (6624 bp)

misc_feature 183..524 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(318..320,363..365,405..407,417..419,471..473, 492..494,498..500) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 657..1934 /gene="AGO1" /note="PIWI...

XM_056122751.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Eurytemora carolleeae protein argonaute-2 (LOC111711586), transcript variant X1, mRNA. (4448 bp)

misc_feature 374..766 /gene="LOC111711586" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 794..946 /gene="LOC111711586" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 947..1309 /gene="LOC111711586" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_023485971.1 - Eurytemora carolleeae - NCBI

PREDICTED: Pantherophis guttatus protein argonaute-4 (LOC117663334), mRNA. (4763 bp)

misc_feature 92..481 /gene="LOC117663334" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 512..664 /gene="LOC117663334" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 665..1027 /gene="LOC117663334" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_034413420.2 - Pantherophis guttatus - NCBI

PREDICTED: Acipenser ruthenus protein argonaute-1 (LOC117413876), transcript variant X2, mRNA. (3201 bp)

misc_feature 474..866 /gene="LOC117413876" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 894..1046 /gene="LOC117413876" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1047..1409 /gene="LOC117413876" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_058999547.1 - Acipenser ruthenus (sterlet) - NCBI

PREDICTED: Globicephala melas protein argonaute-1 (LOC115860028), transcript variant X2, mRNA. (4054 bp)

misc_feature 303..695 /gene="LOC115860028" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 723..875 /gene="LOC115860028" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 876..1238 /gene="LOC115860028" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_030869406.2 - Globicephala melas (long-finned pilot whale) - NCBI

PREDICTED: Globicephala melas protein argonaute-1 (LOC115860028), transcript variant X1, mRNA. (4063 bp)

XM_030869398.2 - Globicephala melas (long-finned pilot whale) - NCBI

PREDICTED: Acipenser ruthenus protein argonaute-1 (LOC117968115), transcript variant X3, mRNA. (3334 bp)

misc_feature 748..972 /gene="LOC117968115" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 1000..1152 /gene="LOC117968115" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1153..1515 /gene="LOC117968115" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_059020041.1 - Acipenser ruthenus (sterlet) - NCBI

Solanum lycopersicum argonaute 2A (AGO2A), mRNA. (3473 bp)

AGO2A" /gene_synonym="AGO2A2" /note="ARC105 or Med15 subunit of Mediator complex non-fungal; Region: Med15; pfam09606" /db_xref="CDD:312941" misc_feature 840..1073 /gene="AGO2A" /gene_synonym="AGO2A2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 1101..1253 /gene="AGO2A" /gene_synonym="AGO2A2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1254..1604 /gene="AGO2A" /gene_synonym="AGO2A2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex...

Synonym: AGO2A2
NM_001279306.2 - Solanum lycopersicum (Lycopersicon esculentum) - NCBI

PREDICTED: Globicephala melas protein argonaute-1 (LOC115860028), transcript variant X4, mRNA. (3533 bp)

misc_feature 193..345 /gene="LOC115860028" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 346..708 /gene="LOC115860028" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(502..504,547..549,589..591,601..603,655..657, 676..678,682..684) /gene="LOC115860028" /note...

XM_030869425.2 - Globicephala melas (long-finned pilot whale) - NCBI

PREDICTED: Argiope bruennichi protein argonaute-2-like (LOC129969264), transcript variant X3, mRNA. (10349 bp)

misc_feature 395..784 /gene="LOC129969264" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 812..964 /gene="LOC129969264" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 965..1327 /gene="LOC129969264" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_056083762.1 - Argiope bruennichi - NCBI

PREDICTED: Ostrea edulis protein argonaute-2-like (LOC125683714), transcript variant X11, mRNA. (2804 bp)

misc_feature 297..689 /gene="LOC125683714" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 717..869 /gene="LOC125683714" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 870..1232 /gene="LOC125683714" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_056141412.1 - Ostrea edulis - NCBI

PREDICTED: Gavialis gangeticus protein argonaute-1 (LOC109294022), transcript variant X3, mRNA. (2458 bp)

misc_feature 164..556 /gene="LOC109294022" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 584..736 /gene="LOC109294022" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 737..1099 /gene="LOC109294022" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_019512210.1 - Gavialis gangeticus (Gharial) - NCBI

PREDICTED: Meriones unguiculatus argonaute RISC component 1 (Ago1), transcript variant X2, mRNA. (7377 bp)

misc_feature 328..720 /gene="Ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 748..900 /gene="Ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 901..1263 /gene="Ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_021659924.2 - Meriones unguiculatus (Mongolian gerbil) - NCBI

PREDICTED: Argiope bruennichi protein argonaute-2-like (LOC129969264), transcript variant X2, mRNA. (10216 bp)

misc_feature 295..684 /gene="LOC129969264" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 712..864 /gene="LOC129969264" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 865..1227 /gene="LOC129969264" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...

XM_056083753.1 - Argiope bruennichi - NCBI

PREDICTED: Ostrea edulis protein argonaute-2-like (LOC125683714), transcript variant X10, mRNA. (2834 bp)

XM_056141410.1 - Ostrea edulis - NCBI

Xenopus laevis argonaute 2, RISC catalytic component L homeolog (ago2.L), mRNA. (3298 bp)

all introns SAMD00012418, SAMD00012419 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3298 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="6L" /map="6L" gene 1..3298 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="argonaute 2, RISC catalytic component L homeolog" /db_xref="GeneID:446823" /db_xref="Xenbase:XB-GENE-1001922" misc_feature 140..142 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="upstream in-frame stop codon" CDS 263..2851 /gene="ago2.L" /gene_synonym="ago2; ago2....

Synonym: ago2; ago2.S; Argonaute2; eif2c1; eif2c2
NM_001093519.1 - Xenopus laevis (African clawed frog) - NCBI

PREDICTED: Ovis aries argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (15675 bp)

misc_feature 150..434 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 462..614 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 615..977 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...

XM_042245406.2 - Ovis aries (sheep) - NCBI

PREDICTED: Argiope bruennichi protein argonaute-2-like (LOC129969264), transcript variant X1, mRNA. (10249 bp)

XM_056083745.1 - Argiope bruennichi - NCBI

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Debug Info:

0.000 | 0.000 | search_start;
0.089 | 0.089 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.182 | 0.093 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.188 | 0.006 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

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