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Previous release (v1)
2025-11-04 18:46:40, GGRNA : RefSeq release 232 (Sep, 2025)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
	
	
	gatcaaattccctagcttctgggagtaaactcttccccaacttgatctcttgaatttctttcctcaacttcatctcccaaaatgttttccgatcctcactcaaatctgggtgcataagttcgaaattcgatttcttcatagcctcgttttgcttctccagttccgaaatctgattcgccagcccaatctcttcttgcgatgtctccatttgcttttcagatataaatctcttagtcgtagagacaagacagatagcttactcgcttcactacactaatggcctatgtcagcgttggtcctgctgctcaggttagggttgtagtgtagtgcagtgaagtgagtaagctatctgtcttgtctctacgactaggagatttatatctgaaaaacaaatggagatatcgcaagaagagattgggctggcaaatcagatttcagaactggagaagcaaaacgaggctatgaagaaatcgaatttcgaatttatgcgtccagatttgagtgaggattagaaaacattttgggagatgaagttgaggaaggaaattcaagagatgaagttggggaagagtttactcccagaagctagggaatttgatc...
	
	position 920 1141
	
	
	XR_003638702.1 -
	
Camellia sinensis -
	
NCBI
	 
 
	
	
	agtgatttcaagctcatggctccgaagagtttcctgctagcttgtttacttgcttttactctacaattcttcttctcgcctccagtatcatcttcagcttctcttctttccacctccaaggaaagctcctctatgaaggatttgattaaacttggagaaggatgtgtgagccacccagaggatgtttctgttgtggttagaaagggtgcgctgtatacagctactaatgatggttgggtcaagtatttcatcctccataatgaaaccttggttaattggaagcacatagacagtcaatctcttcttggactcacagcaacaaaggaaggtgacgtcattatatgcgacagtaaaaaaggtttgtttaaggttaccgaagaaggcgtaaaggttcttgatccagatgtaagatttgcaaatgatgtgatcgatgcatcagatggcacgttgtattttactgtctcaagcaccaaatatacccccgcagatttctacaaagacatggctgagggaaatccttacggccagttgctcaaatatgatcctaaatcgaaccaaacaacagttttgcaagagggattttactttgctaatggcatt...
	
	position 298
	
	
	XM_006445687.2 -
	
Citrus x clementina -
	
NCBI
	 
 
	
	
	agtgatttcaagctcatggctccgaagagtttcctgctagcttgtttacttgcttttactctacaattcttcttctcgcctccagtatcatcttcagcttctcttctttccacctccaaggaaagctcctctatgaaggatttgattaaacttggagaaggatgtgtgagccacccagaggatgtttctgttgtggttagaaagggtgcgctgtatacagctactaatgatggttgggtcaagtatttcatcctccataatgaaaccttggttaattggaagcacatagacagtcaatctcttcttggactcacagcaacaaaggaaggtgacgtcattatatgcgacagtaaaaaaggtttgtttaaggttaccgaagaaggcgtaaaggttcttgatccagatgtaagatttgcaaatgatgtgatcgatgcatcagatggcacgttgtattttactgtctcaagcaccaaatatacccccgcagatttctacaaagacatggctgagggaaatccttacggccagttgctcaaatatgatcctaaatcgaaccaaacaacagttttgcaagagggattttactttgctaatggcatt...
	
	position 323
	
	
	XM_006485118.4 -
	
Citrus sinensis (sweet orange) -
	
NCBI
	 
 
	
	
	alignments, including 14 samples with support for all annotated introns" /db_xref="GeneID:122670138" ncRNA 1..148 /ncRNA_class="lncRNA" /gene="LOC122670138" /product="uncharacterized LOC122670138" /db_xref="GeneID:122670138" ORIGIN // tttctacaagagatggtgtgcgaaacagtttttaatggaaaggaagaacttagtcaatctcttcttgaaagcaagcgaggaagacaagctgaaggtattggaattgtatatgccagatactgaggacatcaatgaagactgatgaatg
	
	position 55
	
	
	XR_006334132.1 -
	
Telopea speciosissima -
	
NCBI
	 
 
	
	
	tccacggaaaatgaaattaccaatacgagtaatcaaacagcaaacatagtaattgatccaggaagtattgattcagaagaaataaacaaattagccgcaaaattagttgaagaatcaattctcaaagcatcacaggaagcagcatcagataaccacgagaaagaaagatcaagtgcaacatcaaaagctgattatgaaagatcatttgatcaagacgtcacttatgaaagatcttcaccgttgcttgaaccaagtgaagaaccagtgatggaatccaaagaaccagaactgacacaagaagagattgatcacattgcaaggatccagagtcttgcagaacaatcatcattcgaacaagcttcaacgattcctgatcgaccacctcttccagcccggcttccgactgtagacgagccgattgtcatctcagaacaacacgaagaagacagatcaagtgcaacatcgggagctgactatgaaagatccttcgatcaagaagtcacgtatgaaagatcttcaccgttgcttgaaccatgtgaagaaccagtgatggaatccaaagaaccagaactgacacaagaagagattgatcatattgca...
	
	position 1741
	
 
	
	
	tccacggaaaatgaaattaccaatacgagtaatcaaacagcaaacatagtaattgatccaggaagtattgattcagaagaaataaacaaattagccgcaaaattagttgaagaatcaattctcaaagcatcacaggaagcagcatcagataaccacgagaaagaaagatcaagtgcaacatcaaaagctgattatgaaagatcatttgatcaagacgtcacttatgaaagatcttcaccgttgcttgaaccaagtgaagaaccagtgatggaatccaaagaaccagaactgacacaagaagagattgatcacattgcaaggatccagagtcttgcagaacaatcatcattcgaacaagcttcaacgattcctgatcgaccacctcttccagcccggcttccgactgtagacgagccgattgtcatctcagaacaacacgaagaagacagatcaagtgcaacatcgggagctgactatgaaagatccttcgatcaagaagtcacgtatgaaagatcttcaccgttgcttgaaccatgtgaagaaccagtgatggaatccaaagaaccagaactgacacaagaagagattgatcatattgca...
	
	position 1741
	
 
	
	
	samples with support for all annotated introns" /db_xref="GeneID:141848280" misc_RNA 1..333 /gene="LOC141848280" /product="uncharacterized LOC141848280, transcript variant X2" /db_xref="GeneID:141848280" ORIGIN // aatgaaaaaaagagataatgaaattaaaaaattgcaaagacaacaatctcgcatcttgcaacattttcagttgcaatctcttcttggtgacgacgacgacgacgacgacgaccacgatgacgccagtgacgatggtggtgatacttcatgagttttttgcgtggtttttgtaaacaaatcaaaaaaaaaaggcgaataaaagatagtgacgaagaatccagtagagtttctgggggaccacgatgatcttcttcctatcttttattcatatctcatctgatttgtttagactttgtatggattagttggatttttctgatactttgactttgt
	
	position 74
	
	
	XR_012603516.1 -
	
Curcuma longa (turmeric) -
	
NCBI
	 
 
	
	
	GeneID:107512815" ncRNA 1..319 /ncRNA_class="lncRNA" /gene="LOC107512815" /product="uncharacterized LOC107512815, transcript variant X2" /db_xref="GeneID:107512815" ORIGIN // cgtcagccggcgctgaactgtgacggcagcgctcacggacccgcggctcgtgacggcattattgggggcgaccatcgacctggatattttttctgcatatgaaaccccgactgacaatctcttcttgcgacgctcgacggtgaagcgccctgttcttccagcagccacggcctctcatgagaagctgctgtcatttaagtgacaacctgcttacagcaaaacgacgccagacgccgttggtttgtgaacggccctcaccacgcggtggacgacgccccgcagaccggcgcccaaaccctgggagcctgcgaagacctcg
	
	position 115
	
	
	XR_001597394.2 -
	
Rousettus aegyptiacus (Egyptian rousette) -
	
NCBI
	 
 
	
	
	ncRNA 1..363 /ncRNA_class="lncRNA" /gene="LOC141757574" /product="uncharacterized LOC141757574" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:141757574" ORIGIN // agagacacgattatcttttggcagtttaggtttgtattagatcgcaccaagttaagagtgtatgttggttctgaaagccccttttctttctcacaatctcttcttgcagcttcctgaagagccgcagtgtgtgtgtgtgcgtgcaggcaggcactatcatgatctcctctgtttggttctggatgtagaagttccactgcagccaggtttttaaaaagaaatactgcagaattcagtaatttgcatgcaaatatccctctaaactaggaaagttcaattcatatttgtgaacatgtgctattctttttcacaccaaaatgtacaacatgagtttcaactcctgttacaatgttggaaacctga
	
	position 94
	
	
	XR_012591672.1 -
	
Sebastes fasciatus (Acadian redfish) -
	
NCBI
	 
 
	
	
	product="uncharacterized LOC122662367" /db_xref="GeneID:122662367" ORIGIN // acagaacaaactcactcttactgaaaatcaagtttcgggggtgaatgtcttctcgcaaggtttctctggaaatcattttaaggggaaatcttctttccagaaacctgcttatagtttcctagagtccgtgctgccggggaaatcatcttcagcaaaaaccagttatttgcagggaagagagtggaaatgatatacgtggacatcttcaatctcttcttgtactaaatgtttctcaacaagagagacatgtgctgtaagcctgtaactgcgaagaattagatctcgaagggatctatttcgtttt
	
	position 207
	
	
	XR_006333008.1 -
	
Telopea speciosissima -
	
NCBI
	 
 
	
	
	ORIGIN // atgaaagaagctgcaagggtggaaagagaaattgctatccaccccgggaaagaggtgcttattaaattagtggcgcaagctattcccacgtatatgatgagtgtattcagccttcctagcggattgattgatgagattcattcgttgctggctcgattttggtgggggtcctctgacactgataggaagatgcattggcatagttgggatacgttgtgctaccccaaatcgatgggcggtcttggctttagggacctacactgcttcaaccaatctcttcttgcaaagcaagcatggcggttatgtacgggggaccagactcttctttatcggctgctgcaagcacgatactttaagtcttcggaatttctggaggcgtga
	
	position 271
	
	
	XM_057395547.1 -
	
Beta vulgaris subsp. vulgaris (sugar beet) -
	
NCBI
	 
 
	
	
	experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:128424167" ORIGIN // ggtggggagagaaggagactctcctgagggcaacagtgagagaagggaacttgccagtggcccatctagtcctggatcctgttctcacagtggccaacaggcatcaatttacacttatttacattgtttatgttgaattgcacttgccattttattacccattcactcaggttggagagcttgttttcacaatctcttcttgtttgaatgaccctgaacaatttagcatcatcggcaaacttcactgctcacccctaattctcaattgtttttgaacaagttaaatagcagaggtctcagtgttgatctttttaaaataaaaaataaaataaggtgttgttaaagttttttcataatacaataagataaaagaaactaaataaaaacaaaaaca
	
	position 190
	
	
	XR_008332942.1 -
	
Podarcis raffonei (Aeolian wall lizard) -
	
NCBI
	 
 
	
	
	LOC121066939" /db_xref="GeneID:121066939" ORIGIN // agacacacctgatgatttattattttcagtagcttatttgtgaatatgaaaaaatgtctttcttgatattcaccaaatgatataaatgcctttactctccagctcttcattttttctgctcactggtgctttgaatgcagtggaaaggcatttctggtctccatggcttctcttaaatgcacgcagagaagggaacataatagagatgatgagccctagcaaattagccaactgcaatctcttcttgttcagttaacgcgcctgtacagccagataccagccacgggagcaaagggctgtgagaggagatttggagcccaagtataggagtagagaagctctcagctgtttgtagcatgtctagaagca
	
	position 235
	
	
	XR_005818030.1 -
	
Cygnus olor (mute swan) -
	
NCBI
	 
 
	
	
	agaactgtcactttgctggtcgatattctcctaggaaacaaaatacagaagaaattttaaatagtgacttcaaatatgatgaggacaagtctagatgaagaactcagagaaatagcccacattcaaagtggcacagaatggacctcattcaatatttccaaggtatcctggagttgttggacagcaaacaatgtatcaaacatttctcaggcctttctgaagccatcctggatctcaggaagacgaccacttttcagatggacaatggtagcattcttatgaattctcaaaagacaatctcttcttgccatataacctggaatactttagtcaccttttg
	
	position 360
	
	
	XR_012488168.1 -
	
Sminthopsis crassicaudata (fat-tailed dunnart) -
	
NCBI
	 
 
	
	
	gene="LOC116657067" /product="uncharacterized LOC116657067" /db_xref="GeneID:116657067" ORIGIN // accacatcacaaacaaaagtcctaataaaagtcgctgactaggactatcctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacacatgaaagagatgtatttgctcagggtctatcaatcttgttctgcctgttttctcaagtcagcagccttatctttacatttactccactcaatctcttcttgtcattttccctttctgtctgaaaataactacccccaagtctgcaaagcatcatctttgtattccatttcttgttgtaaagagtttgtgacattctgcgagatggacatgctagatcggaagagca
	
	position 193
	
	
	XR_004311999.1 -
	
Camelus ferus (Wild Bactrian camel) -
	
NCBI
	 
 
	
	
	org REFERENCE 4 (bases 1 to 413) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA aaatgcaatctcttcttgtattctgtcttgccacaattattctatcaaacttcacagaggcttctgcagatttggagacagcttcacaaagtctgaagcatccgaggaatttgggatggaaggctcctgaaggacatcgcgaaaaacgatatggtggatggggaggtggatatccctacggcggctacggtggatatggtggaggttacggtggcggatatggaggcggatacggaggagggtatggcggacgatatggcggaaactatggaagcagctcatggggatcatattcgagttatagttctggtggatacag...
	
	position 6
	
 
	
	
	product="uncharacterized lncRNA" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:138908792" ORIGIN // gccttcacatgcattaaaaagagaaaatttaaagttcgaaacctttgaagatctagaaagcaaagttctaaaaaagaaacaaaagaaaaaaggggaaatgttatttcaaggaaaaaatttgaaatcaacttgatggcttgcgagttttgagtaccaatctcttcttgggtttctaaaaattgcggaatttgaaaatctattgttgttgtattcatgtattagcttagctccactctctcttcttcttagccttatttagcctcacagctttgtttttaaaatactaggtatgtacacttccagttctttgattgttgctagttcgaatgaatgaaatattgatttgttttggctcca
	
	position 155
	
	
	XR_011415201.1 -
	
Nicotiana tomentosiformis -
	
NCBI
	 
 
	
	
	Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland 9220, Denmark atgccttatgtagctgctacaattaaagaggctatgggatggagggcagttgttccgttggcttttccgcatgctactactcaagcgtctgtgactgacgttaatctccgtgatcagtacggttatggacccggtcgtcggattcgtcctgggatgcatcttgctgaacgcaatctcttcttggctatcgcgaaaatgagttgggtatttgatgtcggtactggtaatggtgaaaagacaaggttgcctattgaaccggatgttgatcatcagacgggatattgggagggcttgatcttgggtgctcggccattcccttgtcagatgtctgtgaggtctgaggcgagaagagatgccattgtgcgggaatttcagaagatgaattctgatatgttttcgagattcgcattttga
	
	position 171
	
	
	XM_056644879.1 -
	
Penicillium citrinum -
	
NCBI
	 
 
	
	
	GeneID:107512815" ncRNA 1..409 /ncRNA_class="lncRNA" /gene="LOC107512815" /product="uncharacterized LOC107512815, transcript variant X1" /db_xref="GeneID:107512815" ORIGIN // cgtcagccggcgctgaactgtgacggcagcgctcacggacccgcggctcgtgacggcattattgggggcgaccatcgacctggatattttttctgcatatgaaaccccgactgacaatctcttcttgcgacgctcgacggtgaagcgccctgttcttccagcagccacggcctctcatgagaagctgctgtcatttaagtgacaacctgcttacaggaaacctctccatgaaagaagaagaaaacaggtttttatcgaataagcagtaaaccagaacgtgacgtgcatccaggcaatccagtgggacatctcacctggacagagccagactggtgcgacctgtcacacacacgttctcgggatgagcaccagcttgtcttcaggtaagaggacttgacggcaccattta
	
	position 115
	
	
	XR_001597393.2 -
	
Rousettus aegyptiacus (Egyptian rousette) -
	
NCBI
	 
 
	
	
	JOURNAL Submitted (13-DEC-2022) Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland 9220, Denmark atgcgcgccgctttgacgtgcagttgttcccatggattctatatggagaggaaaattgtgtacagcgttggtttgggatttatgattttcagcaaagtcagtctcaaaaagactgataggctcgtccttgacacggagattatcaatctcttcttgatcaatctcatcaccactgccaccatcgaagctctcagggatatggtagacaacgtcctcagagaagttgtaactcgcagaagtgtcattctcgcacgcaaaatcgtcaatgttgccaaaaacaacatcctcgttctcataatcaatgtccgattcagagacccccggggcctgctcaagaacgaattctggatcctcggggacggctgccttcttttgctgtggatgggatttcggttgagcagcagcagcagcagcagcagaagatggagcagactgtaa
	
	position 144
	
	
	XM_056924418.1 -
	
Penicillium angulare -
	
NCBI
	 
 
	
	
	gtgattttagacattgggaaatggtggaatcatatgagcagcatggtgatgaaaatgatgggcatgttccatatgtaccttctggtgacagaattatggaggatatgcgggattctatcactacagagatggctgaaggaacgagacttccatattaacagctcccggtatttcaatgttatgattcttggacctacacaatcaccttatgaaggagttgggtttgaatcgagaagcaaatacttgtttggtaaagtctctatctagattaagcaaatcgaggaacaaaaccaatctcttcttgctctgttttaagacactgctttgattattatgtccctaatcttacattatgaatgtatttcactaaagcagtgacattggttggttt
	
	position 292
	
	
	XM_021033133.1 -
	
Arabidopsis lyrata subsp. lyrata -
	
NCBI
	 
 
	
	
	including 41 samples with support for all annotated introns" /db_xref="GeneID:107337268" ncRNA 1..444 /ncRNA_class="lncRNA" /gene="LOC107337268" /product="uncharacterized LOC107337268" /db_xref="GeneID:107337268" ORIGIN // cagaatgggtgttcctcttgtggttttgcttgaattctgttctgagggtgataacgtcttgatgccgtcaatctcttcttgtctgctaatgagtggctcaaatttgttcccacgaaagaggtggaaaatccgttctttggacaaacaagtaattttgggattccagcatcttggtctttaatgtttggatcaccaatgcattggcatggaaacctattttagtgaggcagactcatgagttatgtacttaccataactttcacgtttgtttgatcactgttttgcgcttagtttagcaaggaacctctccatgttacgggtcattatttgtagtatttgctcaaaacgttaccatgaaacagctaccacgtgtcaaa...
	
	position 69
	
	
	XR_001562778.1 -
	
Acropora digitifera -
	
NCBI
	 
 
	
	
	tatctttgttctcttaagaggagtgattgaatgctaatgaagcaaggagaaaccgtagctgccttcagtcttctatctcagctctgttctgcagcactgccagctgctctgggctgctctcatttccacaatccttagctggttaactgggacatgctgagagcagacagctctgacaaccttgctgctggagcctttctcttcattcaaaatttgtgcagctgggattctgatctggagagtcctttttgtaacctctgtgacagacatgagaggtgttgatctgcttagcttcaatctcttcttgaatggacaacaggtgtatgccttgtgaggagctgtgtgcacagctgggaaggtgcatagacatgaagcactgcatcaggcag
	
	position 310
	
	
	XR_011727899.1 -
	
Heliangelus exortis -
	
NCBI
	 
 
	
	
	misc_feature 144 /gene="LOC110427542" /note="gag-polypeptide of LTR copia-type; Region: Retrotran_gag_2; pfam14223" /db_xref="CDD:464108" ORIGIN // atggcagaatgcagttctattagaccccatgtgctgaagatgattgaactcatcgagagacttggacaattgggattagcaatggatcatgagcttagtatagacttagttctacaatctcttcttgacagctttagtcagttcatgttgaacttccatatgaatcgattggaagccacttttcttgaacttttgaatatgctaaacatggtagagtggtccatcaggaaagataaaggatcattgcttcttgtttcttcttttgaggctcatacgaaacaacagaagaagaaagcccaaaaagggaagaaggtaaaatctcaaaatgagaaggtgctgaagcctaagagaggtgtcaaaaaggacaaagagaaagatattttgccatcattgtggcaaacttgggcattggaatag
	
	position 115
	
	
	XM_021443097.1 -
	
Herrania umbratica -
	
NCBI
	 
 
	
	
	Wuyts,J., Martin,F. and Grigoriev,I.V. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (19-NOV-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA atgtactctcggtctccatggcctgttgcatctcctgctgcaccactctcaagtggtaatcaatctcttcttgtcattcacggcgaacttcctcttgcctctgttctcaagtatttggatgagaattgtgtcgatgagaccaacattgtcgatggtgacacagacgtcgtcaatggtgacgcagacgtcgtcaatggtgacgcagatgtcgtcaatggtgacacagacgtcgacggtgatgtagacgtcgtcggtgttgacacagatggtggcacagacgtcgtcgatgatgacacaaatggtggcacagacgttgttgatggtggcacagacactgttggaggtgacacagacgtcgaggttgagc...
	
	position 61
	
	
	XM_001879458.1 -
	
Laccaria bicolor S238N-H82 -
	
NCBI
	 
 
	
	
	ggcctcttatccacgtctgcagaaaaatcactcacgggatttgacatctgctgcacaccatggagaagacaccttattgatgaaaaagaacacagttcctgaggattgctctgggatggggaaaacttgatcatcttctgccccttgtgctcacagaaactgtttgaggtctgtctcctggggaccccaccctccatttttaggactgaatacctgaagtacagttgtcatcctgttgaatcttatgttacctgcattttatgtcttcaacttctctggttttgtttaagcaaacaatctcttcttgagaagggacagaagggaaataaaattctagatacccaatgtgtccaaaaa
	
	position 422
	
	
	XR_008998512.1 -
	
Manis pentadactyla (Chinese pangolin) -
	
NCBI
	 
 
	
	
	note="uncharacterized LOC139318598; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:139318598" ncRNA 1..447 /ncRNA_class="lncRNA" /gene="LOC139318598" /product="uncharacterized lncRNA" /db_xref="GeneID:139318598" ORIGIN // tgccagtccaatctcttcttgaaaacctccagtgatggagcacccacaacttctgaagctaagtgctcaaaacgccaaatccatgcatctgttagagttgttatcctgtcacaactcatgaaggaaacagaagagcctggtggcgcagcagactaatagcctgttattatcattcagctgcctgcaattactgctagttcgaatctcctcaggctcaaggttgactcagccttccatcctttctaagaatacccaggagaaacagttccggccttctttccatgattttttaaacatctgatgagatgaagccagctagggatcg...
	
	position 9
	
	
	XR_011600520.1 -
	
Pituophis catenifer annectens -
	
NCBI
	 
 
	
	
	ORIGIN // atggggcccaaggtccaaaacaggagctatgaggccttccaggtggcacttgccaaagagaatgaggcagaaaatcaaacttccgactccatcagcgagatgtcctaccagcagaatcagcagcagtgccagtcccctcccaagtgtcccaccccgaagtgccctccaaagtgtcccccaaagtgcccctcaatctcttcttgctgcagtgtcagctctgggggctgctgcagctccagctccgggggtagaagctgctgcagttttggaggtggcagctcctgcctgagccaccacagacgacacaggtcccactgtcacagatgccagagctctggctgctgcagccagccctcagggggctccagctgctgtggagggggcagcagtcagtcctctggaggctgttgctga
	
	position 191
	
	
	XM_032843692.1 -
	
Lontra canadensis (Northern American river otter) -
	
NCBI
	 
 
	
	
	lncRNA" /gene="LOC140647122" /product="uncharacterized lncRNA" /db_xref="GeneID:140647122" ORIGIN // gaccacaggacagtcaggaagaaaaagtgaaatattttattcactcatggggccaaacttgcttaatgcctgccaagccttcaccaagaaaggaattgccaacagcctctagagttagaatggaatatgacagcactttatgcatgtaaaagacccagagttcatgctttactgagcagaaaccagcaatctcttcttgcctctacctctccttctacttttgatgtgttttttccgtgctgtggaaactcgtgcagaattgttatgccagttggacagaattttatagccaaaagttcaaccctgctgtttggctctatggactccacaccgtcgtcattcacgcaggcactgccaatgactcatcaaagatgatgtcccagatgtccctcttcttcccctgccaagcttgccaaatacctctttggcatgccacccaaaggacagaagc
	
	position 187
	
	
	XR_012040677.1 -
	
Ciconia boyciana (Oriental stork) -
	
NCBI
	 
 
	
	
	gtcttaaagctcatcgaatccaccaccatggatttccgcaacctatcattcactctcctcctgctatccactacagtcatgttatatttcagggctctattagcgcatcccatccacattattagcacccctgaatcagtgcagactgcagaaccagcgccaaccgacgccctcgccttcctcgacgagcccgtcttcaaaccactggcatctcacatagcagaccacccatatccatggcgtgataaacgtccattccaggagaccaattatgcgttactcatgggtgcagttcaatctcttcttgaggctgaggttgacgaggaagagggtggtgtgggtttgaacgagggtcatgggcaacaggacgtcgttgagattaactcgtctgagacatacattctctgggttggggataaggatgatgagaagtgttcttgcgcttag
	
	position 301
	
	
	XM_025656494.1 -
	
Aspergillus piperis CBS 112811 -
	
NCBI
	 
 
	
	
	protein LOC134258183" /protein_id="XP_062596710.1" /db_xref="GeneID:134258183" /translation="MMQSLLVFVISVASIKTLHGSNGVMYPSSLSTLNEVPNCPRNQHDWEKAAARKDCNQISKSDNKPFVYHCLINEWANATVEVCAPTWFVSGFCAMYSSSDARVIDNFNYDCTHYTPPCPQRYISSEAYKYGVCYDI" ORIGIN // tccattaacacaaagtcttggtaaaaaagtaaatgatgcaatctcttcttgtatttgtcatatcagttgcatcaataaaaacactgcatggaagcaatggagttatgtatccatcgtcattgtcaacgcttaatgaagttcccaattgtcctagaaatcaacatgattgggaaaaagctgcagccagaaaggattgcaaccaaattagtaaaagtgacaacaagccctttgtttatcactgtttaataaatgaatgggcaaatgctacagttgaagtatgtgctccaacatggtttgtctcaggattctgtgcaatgtacagttcttccgatgcaagagttattgacaactttaactac...
	
	position 39
	
	
	XM_062740726.1 -
	
Saccostrea cuccullata (small rock oyster) -
	
NCBI
	 
 
	
	
	College Green, Dublin 2, IRELAND atgggctggcatgctcaaaccaacaccttgtatgctggtagtgtaaatctttacgggggacaagtgtacctttggcaaggtgacataccttccacatccatgtcaaacaaaagctgtaaccgccgatcgtgtatgtttcccaaaagggcaaatgcctgcatacgtaagctgaaacgggaaatgattctcagacaatcacagcgcgtaaacaaaggcacgctagtgaatagccaatatagtcgcaaaagactagtcaatctcttcttgttctcgaaggatcaggtcagggtttcttgtggcacattctctaaaaagaaacctcttcttcagcgtgccagcaccccccctcaacttttttttcacaattgcgtacatacgtgtagtatttctctaagaagaagaacatactcagtacaatttggacagctcgttaccgatactaccaaaactatgttctctttgggtttatcgcaccctggattctcgcttttacagattatactgtatccttttctttcggcggttagctaa
	
	position 255
	
	
	XM_003676917.1 -
	
Naumovozyma castellii -
	
NCBI
	 
 
	
	
	gcggcggctgctgctgctgctgcttctcccaggggcgctgctgagcttcctcccgcaggcgaccccgcacccgagtgtgacacaccgttacgaaaatgttaaagcagtggagatatctgtgcagccaactgcagttgaagaggttatatcgggagggaaagatgctgttgaagtccagcatcaatctaaaaagaagaaaaatgacattatagagttgaaagagaccttggaggtcttctagtccaaatccctgctcaagcaggagatcctatccattctggacaaattactatccaatctcttcttgaaaagttccaa
	
	position 433
	
	
	XM_058156240.1 -
	
Ahaetulla prasina -
	
NCBI
	 
 
	
	
	JOURNAL Submitted (30-NOV-2022) Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland 9220, Denmark atgcaggatatctacactaagatggatacaatggtagcggtgattctaacagacgtaaactttatgacaaacacaccgataattaccgatcaagcggacgagcaggaggtctatgagggatactcaaattttgtacaatctcttcttgagctcatggacgccgtatcgagcagcgcagcccagctgaaatcgatcaacgaaacaaccaagaataacgttccctttggaattcgcatcttgcaaactgccgttgacgtgagttccctaattaactcttcgctaccacctgaggagatgatcgatgagatgctgacaccttacaaggcctacttctacaacatcatcggtctcttcccagccaacagcgcatacaacgcccaggccaacaaccagaaggctcaggtggatacgcattgcttccaggccgtctgggcatttgatcgcaggtat...
	
	position 136
	
	
	XM_056876776.1 -
	
Penicillium crustosum -
	
NCBI
	 
 
	
	
	ggcaatgaattgagtctgtggttggaggcgagtgggggatgcaaagggggtggaaggattttgggtatgggttctttgagcagaacctataaagttgctggtacctcttccaccacctcccctgttgtcacatcacagattcatagtttgactgaggaggtaacccatttgaaagggttattagaacaaagagatcaagaaatgataagaagagatgaagaaatgaaaaaaagagataatgaaattaaaaaattgcaaagacaacaatctcgcatcttgcaacattttcagttgcaatctcttcttggtgacgacgacgacgacgacgacgaccacgatgacgccagtgacgatggtggtttttgtaaacaaatcaaaaaaaaaaggcgaataaaagatagtgacgaagaatccagtagagtttctgggggaccacgatgatcttcttcctatcttttattcatatctcatctgatttgtttagactttgtatggattagttggatttttctgatactttgactttgt
	
	position 305
	
	
	XM_074736329.1 -
	
Curcuma longa (turmeric) -
	
NCBI
	 
 
	
	
	Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland 9220, Denmark atggcagcctcgttgtcttcgtcggttacatcgctgcagtcatcgctgcagctgctggataattcaataaccaccctcgactcgggcgtgagcgactttcctcgcctttgtaaggtcctttctacaacgcgacattttgagctactaccagagccaacactgcgtgaggcacaacaatctcttcttgatgagatcacccccagcatcgcccatcttctcacactatcatcaaaccacgtcgaaaagctcgcacgccgtgaggaaagcttaaaagcaaaatgcgatcttcaagaaggaagactctcatctaatgcagagagccgcccatctgctcctcgcagtcaaccccagagcagcgcattgcggggtcgcatggcggggtctagcgctggctcatcgggcagcgcagcagccaaagccgcagaatacaagagactcgtacagaagaaagagcgactcaagtttgcggttgaccgattgga...
	
	position 175
	
	
	XM_056959224.1 -
	
Penicillium brevicompactum -
	
NCBI
	 
 
	
	
	note="mannose binding site [chemical binding]; other site" /db_xref="CDD:237995" ORIGIN // atggcggcttggcctcttcctagcaccctctccttgttaacactaatactcctacaatcatcacctattgctgcccaaaataaaggcaatataccagtaggacaatccctatcagctgccaccaataattcttcatggcattccccttcgggcgatttcgcctttggcttttccaaattttcaaacagcagcaatctcttcttgcttgccatctggtatgtcaagattcccaccaccattgtttggtacgcaaatgatggtaatcctgttcctcaaggatcatcagtcaagattacagctaatgagggactagttctcagtgatcctaacggaattgacctatggaacacctctgatacgctaagtgatggaggtgaggtaaagtatggctacctgaatgatactgggaatttcgccctcaaaagtagcagcagtgacaatccagtttggcagagctttaaccatcctacagacaccttgctgccttctcaggttatggagataaatat...
	
	position 192
	
	
	XM_021916304.1 -
	
Chenopodium quinoa (quinoa) -
	
NCBI
	 
 
	
	
	tgcatagagctgaagtgcttctgcatcctgatagccatcgtggaggtgctcatccgcgggttggatcgtttttttgtggatcgcgacagcatcctgggatttttgtccctcgtggtgagcggtatctacgtaatctgctgcatattccttcttcttggagccgtgctgggggtaaggtactttctgttgccctacctctcggtttcctgcctccgcttccttattttggttgccgagggcgtgtttgtggccacggaaggcttcgtcaatgaatatcttgtcttcgatgttctccaatctcttcttggtctatacttttggctggtggtcttctcctactacgatctgttgaaggacacctgagtttatatatttgtgcttacttttatattgtaaaaaatacttgtttagatctgagt
	
	position 389
	
	
	XM_037860603.1 -
	
Drosophila subpulchrella -
	
NCBI
	 
 
	
	
	pfam09402" /db_xref="CDD:430586" ORIGIN // aacagcagcaaacaagggtgccgtaaaaggcggtctgagcatcccgctcggccggacacatcactctgatctcttccaaatgaagcgcgcaaaacccaagtcccattccaaaacttcaaatcattctcacaattcttctccttctttgaaatcgttcatagaaccccctcctgatttctttccctcgaagcacgagttcctcaggctcatcgtcgtccttgcattcgcatcagcagttgcttggacatgcaatctcttcttgacatcttttattaatccctccaccaagcccttttgcgatagcaacgtagactttccggattcattttccgatgattgtgaaccttgtccaagtaatggagcatgttacgatggcaaattggaatgtctccagggctaccgaaagcatgggaagttgtgtgtagaagatggagatattaataaatcagctaaaaaaatttcggacagagtaaaatgtagcctatgtgaagattatgctcagtatttgtgctatggagtcggatcagtttgggttcaagaggatgaaatatggaaaa...
	
	position 250
	
	
	XM_054953827.1 -
	
Prosopis cineraria -
	
NCBI
	 
 
	
	
	Creek, CA 94598-1698, USA atggatttccgcaacctatcattcactctcctcctgctatccgctacagtcatgttatatttcaggactctactagcgcatcccatctacatgattagcacccctgcatcagtgcaaactccagactcagcgccaaccgacgccctcgccttcctcgacgagcccgtcttcagaccactggcatctcacatagcggacaacccatatccgtggcgtgataaacgtccattccaggagaccaattttgcgttactcatgggtgctgtccaatctcttcttgaggctgaggttgacgagggagagggtggtgtgagtttgaatgagagctatgggcaacaggatggcattgagagtaactcgtccgagacatattttctctgggctggggaagatgagaagtggtcttgcgcttagcaaaagcgctcagaggagttgagaaagtgaagatggtccttcgagacctgggattgtgagaagttcatttttggaaagtgggtttaaaacccactat
	
	position 268
	
	
	XM_025687799.1 -
	
Aspergillus costaricaensis CBS 115574 -
	
NCBI
	 
 
	
	
	ggcagtgttagattcccttgtgccgggagacctggtggagttccaaaggtcgtggctcttctcccactgggccgtttatattggtaatgaagaagtggtccattttattgaacgcaattcaggaggtgtcttcagttcctctagtgagcgttctatgacgggggtagttcgaagggattccttttggacagtggcagggaggagtaaggcgttcaaaaacaacagaagggacgccaaatacagctgtgatgtgatagtgacgagggctctgtcaaagctgggagtgagcgagttcaatctcttcttgagaaatagtgaacattttgtagcctggtgtagatatggtgaagagtgcagtgaacaggcacaaaccatctggacaatgtttttggggtctatggctgtaattgtggggggcattgccgcactcactggccttaggcgatag
	
	position 321
	
	
	XM_013559232.1 -
	
Lingula anatina -
	
NCBI
	 
 
	
	
	aatcttcagttccacagtcacctggtgagtctggggagccacgcctacatgtctgctgccaagcacatcaacaacaccacacagcagctgctcaagtcacatgttgctatccaggacgtgtctcacaacatgaggctgatgaccaacgacctgttccgcctggaggacaagatcaacattatctcctcctgtagcctgttacctgacatcaacatagaactgtcgtcatagcaacaccatctcctcctatgacctgttgccaggcatcaagatagaactgttgtcatagcaacacaatctcttcttgtaacctgttgcttgacatcaacgcagaactgttgtcatagcaacaccatctcctcctataacctgttgccaggcatcaagatagaactgttgtcatagcaacaccatctcttcttgtaacctgttgcttgacatcaacgcagaactgtcatcatagcaacaccatctcctcctataacctgttgccaggcatcaagatagaactgttgtcatagcaacacaatctcttcttgtaacctgttgcttgacatcaacgcagaactgttgtcatagcaagaccatctcctcctgtta...
	
	position 649
	
	
	XM_046710202.1 -
	
Haliotis rubra (blacklip abalone) -
	
NCBI
	 
 
	
	
	cagcgagtggcgaacaatctcatgccacccataatactcaaagtcaaaatacgactggtcaatccaattcgaccgatccacctcggagctcacctactctggaacgtaccctctctgaggcgactactgtcgtggatgtaggtgccggtcaatctcatatcgacctacccagcttcacggtccgaacaactggtcaatcctgctgcgaaacccattcaggcgagattgcgaaatgtatgtgttatagcgttacgtgcgtttgtggggcgggtttggcgattggtacagtggcggcaatctcttcttgctgtaatggatgccctcccttctaa
	
	position 410
	
	
	XM_066225539.1 -
	
Kwoniella europaea PYCC6329 -
	
NCBI
	 
 
	
	
	aatcttcagttccacagtcacctggtgagtctggggagccacgcctacatgtctgctgccaagcacatcaacaacaccacacagcagctgctcaagtcacatgttgctatccaggacgtgtctcacaacatgaggctgatgaccaacgacctgttccgcctggaggacaagatcaacattatctcctcctgtagcctgttacctgacatcaacatagaactgtcgtcatagcaacaccatctcctcctatgacctgttgccaggcatcaagatagaactgttgtcatagcaacacaatctcttcttgtaacctgttgcttgacatcaacgcagaactgttgtcatagcaacaccatctcctcctataacctgttgccaggcatcaagatagaactgttgtcatagcaacaccatctcttcttgtaacctgttgcttgacatcaacgcagaactgtcatcatagcaacaccatctcctcctataacctgttgccaggcatcaagatagaactgttgtcatagcaacacaatctcttcttgtaacctgttgcttgacatcaacgcagaactgttgtcatagcaagaccatctcctcctgtta...
	
	position 662
	
	
	XM_046710201.1 -
	
Haliotis rubra (blacklip abalone) -
	
NCBI
	 
 
	
	
	cgtcataaggatgacgatgatcaggcagcatgcgtgatgctaaccagtatgactcctgagctccaaaagcagtatgagcacatggatgtccaatccataattcttcatcttagaaaattgttcgataaggaatggcgcattgagagatatgagatctctaaagaactattccgatgcaagatggtagaaatgagttttcttagaccccatgtgccgaagatgattggactcatcgagagacttagacaattgggattagcaatggatcatgggctaagtatagacttaattctacaatctcttcttgacagcttcagttag
	
	position 481
	
	
	XM_018120908.1 -
	
Theobroma cacao (cacao) -
	
NCBI
	 
 
	
	
	China Agricultural University, Yuanmingyuan Xilu 2, Beijing 100193, China atgcgcttcctggctggtttattgactttggcgactttggcgtcgtccgttgtcgctcatggcattgtaactcaacctccaactcgcacactcgggagtgccatgattgcagcttgcggtgaaggtgctgtctcggctcaaaaatccaatgtcaagggaccgattgaaagccagattgccaagattgattccaactacaagcccgcgcaatgcaatctcttcttgtgccgtggccaacagtttgctgacaacaaggacaaagtccaaacctacaagactggtcaagtcgtgaacattgtactagacattgagaaccaccatcctgttggctatgcaaacgtatctgttatcgatactgccacaaacaagatggttggcaagcctctgattgcatgggatccttactttactggttatccgtaccctaaggatcaagagaacttcaacgtcactattccagagctcagcggcaaatgcaagactgccggagaatgtgttctacaataccactggtactcccgaacgg...
	
	position 213
	
	
	XM_043328844.1 -
	
Rhizoctonia solani -
	
NCBI
	 
 
	
	
	Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:105058002" misc_RNA 1..549 /gene="LOC105058002" /product="uncharacterized protein" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:105058002" ORIGIN // ctgtcaatctcttcttgaaatattcccttggataaatcgtggtgacaatgttcgatgtttgcaagttaaatgatgattcaaaacaaacaacttggtgaaagctctgataaagtaacaaagcattgattctttcatactgatggttttcctttatcctctaccaacagaaaggaagctatggttcttcaaattctgtatggcttatatttgggctttccaattcattgcctctttgcctttcaaatacatgcagtcactgtatcatgactgggacgtcaaattgaatggctatactagtgtcacgtgatcaacaatttcactgc...
	
	position 5
	
	
	XR_012137205.1 -
	
Elaeis guineensis (African oil palm) -
	
NCBI
	 
 
	
	
	AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA tccaatctcactcaaaatctcctccatgttcatctcttctccacctggcaaaagcttctgcaattccttcaatctcttcttgatctctcctccttcttcttcttcgtcgctgtcttggtgtttttctccaccttgtctcttgctcgatctttctagaatctcggaaggagaactactagtgctaattggatcatcataaggggaagataatagcttctgttgcaagaaacggctccacgcgaattcttgagcagacaatgcgaaagccatgtctacttcatgtttcacgggttcttgtttggttggagagaaaagactcgctttctcttgtttataatttgcctctccatgtgaaatttgtttgcttcgtcggaactct...
	
	position 70
	
	Synonym: F19F24.17; F19F24_17
	NM_127454.2 -
	
Arabidopsis thaliana (thale cress) -
	
NCBI -
	
TAIR
	 
 
	
	
	Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA atgaccttcaatccatttgatttattttattctattacagtcatcactcttgattattcttgtaattatatttattcgagaatatctcgagtgttaccgcttaagaaaccagtggaagagaacagagaattaaaggatgaatcagcaagtaaagaatcagatcggatcgtatcacaaaatcgacagcgtcacagttcaatctcttcttgcccagcaaatgacacaccactcattctttcaccttctacttctacctcttccctttggagtttagattcaaatcgttcaagagtagaagaaatgatttatttattcgaaaccggaaatcatctacagaaacgaagatacagtatggatgcttgttatccaacttttattcgagaaagaaaatttgaatatttacccactgtgaatgaatggagaaagagagagaatagcacgacttttcctcctattcgtttgtcgacatccaattccacgtaa
	
	position 197
	
	
	XM_067663713.1 -
	
Rhizopus delemar RA 99-880 -
	
NCBI
	 
 
	
	
	attggcgttgaggaaatggagtccgccctccttacttctaaacaagagataaagcaagatgacacagtattactgtatatggcatacaacgaaagggtctccccggaggacccccgatggcagcatgatttccccggcctagcgccagaatcagtgcattggcttgctgacagaggttgcaaaatctttggcgttgaggctgtttcgcctgcacctgaaggtgaattgaacttcatcgcgcacaatatctgtggggagagaggcattacccatattgagggactcgacaatctacaatctcttcttgggcgtggaagatttcgatttattggtttcccgttaaagctcatgggcgctagtggaagtcctattagggccgtggctgtatttgaaaagtga
	
	position 517
	
	
	XM_057269599.1 -
	
Penicillium waksmanii -
	
NCBI
	 
 
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : https://ggrna.dbcls.jp/both%3acaagaagagattg
lang         : en |
div          :  |
spe          :  |
query_string : both:caagaagagattg |
format       : html |
download     : 
0.000 | 0.000 | search_start;
0.091 | 0.091 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:caagaagagattg)%7C(nt:caatctcttcttg))?to=0&format=json
0.147 | 0.056 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:caagaagagattg)%7C(nt:caatctcttcttg))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.154 | 0.007 | cgi_end;
 
GGRNA ver.2 by
@meso_cacase at 
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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