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2026-10-05 17:46:51, GGRNA : RefSeq release 233 (Jan, 2026)
Summary:
Results:
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gene="Cldn4" /note="upstream in-frame stop codon" CDS 192..824 /gene="Cldn4" /codon_start=1 /product="claudin-4" /protein_id="NP_001012022.1" /db_xref="GeneID:304407" /db_xref="RGD:1307932" /translation="MASMGLQVLGISLAVLGWLGVILSCSLPMWRVTAFIGSNIVTAQTSWEGLWMNCVVQSTGQMQCKMYDSMLALPQDLQAARALMVISIIVGALGMLLSVVGGKCTNCMEDETVKAKVMITAGAVFIVASMLIMVPVSWTAHNVIRDFYNPLVASGQKREMGASLYIGWAASGLLLLGGGLLCCNCPPRRNEKPYSAKYSAARSVPASNYV" misc_feature 201..701 /gene="Cldn4" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN // REFERENCE 1 (bases 1 to 1824) AUTHORS Jie,H...
Cldn8" /note="claudin 8" /db_xref="GeneID:304124" /db_xref="RGD:1308575" exon 1..2250 /gene="Cldn8" /inference="alignment:Splign:2.1.0" CDS 3..680 /gene="Cldn8" /codon_start=1 /product="claudin-8" /protein_id="NP_001032863.1" /db_xref="GeneID:304124" /db_xref="RGD:1308575" /translation="MATYALQMAALVLGGVGMVGTVAVTIMPQWRVSAFIESNIVVFENRWEGLWMNCMRHANIRMQCKVYDSLLALSPDLQASRGLMCAASVLSFLAFMTAILGMKCTRCTGEDENVKSRILLTAGIIFFITGLVVLIPVSWVANAIIRDFYNPLVDVAQKRELGEALYIGWTTALVLIAGGALFCCVFCCTERSNSYKYSVPSHRTTQRSFHAEKRSPSIYSKSQYV" misc_feature 15..548 /gene="Cldn8" /note="PMP-22/EMP/MP20/Claudin family; Region:...
note="upstream in-frame stop codon" CDS 481..1200 /gene="Cldn14" /codon_start=1 /product="claudin-14" /protein_id="NP_001013447.1" /db_xref="GeneID:304073" /db_xref="RGD:1309165" /translation="MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTGIYQCQIYRSLLALPRDLQAARALMVISCLLSGMACACAVVGMKCTRCAKGTPAKTTFAVLGGALFLLAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTLLCLSCQDEGPYRPYQPQSRAGATTTATAPAYRPPAAYKDNRAPSVTSAAHSGYRLNDYV" misc_feature 547..1023 /gene="Cldn14" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN // REFERENCE 1...
Cldn17" /note="upstream in-frame stop codon" CDS 140..814 /gene="Cldn17" /codon_start=1 /product="claudin-17" /protein_id="NP_001100582.1" /db_xref="GeneID:304125" /db_xref="RGD:1307462" /translation="MAFYPVQIAGLVLGFFGLVGTVGTTLLPQWRVSAFIGSNIIIFERIWEGLWMNCIQQAMVTLQCKFYNSILALPPVLEAARALMCVAMALSLVALIIGICGMKQIECTSSSERVKAYLLGTSGVLFIVTGIFVLIPVSWTANIIIRDFYDPTIHAGQKRELGGALFLGWATAAVLFIAGGLLCGYCCCNRKEQWHGYPVSAYRVPPKDSQRKVTVPRKTSTSYV" misc_feature 155..685 /gene="Cldn17" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN // REFERENCE 1 (bases 1 to 1177)...
LOCUS NM_001109402 1008 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus claudin 34D (Cldn34d), mRNA. ACCESSION NM_001109402 XM_001056879 VERSION NM_001109402.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473966.2. On Oct 4, 2007 this sequence...
stop codon" CDS 103..990 /gene="Cldn23" /codon_start=1 /product="claudin-23" /protein_id="NP_001028234.1" /db_xref="GeneID:290789" /db_xref="RGD:1309001" /translation="MRTPVVMTLGMVLTPCGLLLNLVSTLAPGWRLLKGFRDQPVDVVLYQGLWDICREQSSRERECGQPDQWNYFGTQPVQVARGLMITSLATTALGLLLASLGVRCWQEEPHFGLAGLSGVVLFAAGLFSLIPVSWYNHFLADPDVLAAPAQPVTVQVSYSLVLGYLGSCLLLLGGFSLALSFAPWCEERCCRCRKAPPAGPRRSSISTVYVDWPEPALTPAIKYYSEGQHRPPPAQQRDTGKLKVGFPMPRPPPKAYTNPMDVLEGEEKKTASSQDGSSSRSTRPCQNSLPCDSDL" misc_feature 115..>513 /gene="Cldn23" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919"...
alignment:Splign:2.1.0" CDS 119..622 /gene="Cldnd2" /gene_synonym="RGD1566413" /codon_start=1 /product="claudin domain-containing protein 2" /protein_id="NP_001102613.1" /db_xref="GeneID:499140" /db_xref="RGD:1566413" /translation="MGVKKSLQTGGNLLNLLSSVLTVLSTTTSYWIRQQGGHSGLWQECTHGVCSNMPCQNTLAVTTACMVLAAAFSIVALGMGIRIQCQEAESLRSQNTIVLLFLSGLLLLIALTVYTAKNAWKPEVFFSWSYFFGWLALPFSFIAGFCFLLADMIMQSTEAISGFPVCL" misc_feature 185..550 /gene="Cldnd2" /gene_synonym="RGD1566413" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon 288..428 /gene="Cldnd2" /gene_synonym...
product="claudin-12" /protein_id="NP_001094283.1" /db_xref="GeneID:5" /db_xref="RGD:1561053" /translation="MGCRDVHAATVLSFLCGIASVAGLFAGTLLPNWRKLRLITFNRNEKNLTIYTGLWVKCARYDGSSDCLMYDRTWYLSVDQLDLRVLQFALPLSILIAMGALLLCLIGMCNTAFKSSVPNIKLAKCLVNSAGCHLVAGLLFFLAGTVSLSPSIWAIFYNSHLNKKFEPVFTFDYAVFVTIASSGGLFMTALLLFVWYCACKSLSSPFWQPLYSHPPGMHTYSQPYSSRSRLSAIEIDIPVVSHST" ORIGIN // REFERENCE 1 (bases 1 to 3480) AUTHORS Castro Dias M, Coisne C, Baden P, Enzmann G, Garrett L, Becker L, Holter SM, Hrabe de Angelis M, Deutsch U and Engelhardt B. CONSRTM German Mouse Clinic Consortium TITLE Claudin-12 is not required...
LOCUS NM_001109366 3973 bp mRNA linear ROD 24-JUN-2024 DEFINITION Rattus norvegicus claudin 34A (Cldn34a), mRNA. ACCESSION NM_001109366 XM_001064790 XM_001068935 XM_039099990 VERSION NM_001109366.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
product="claudin-16" /protein_id="NP_571980.2" /db_xref="GeneID:155268" /db_xref="RGD:620322" /translation="MKELLQYAACFLAIFSTGFLIVATWTDCWMVNADDSLEVSTKCRGLWWECVTNAFDGIRTCDEYDSIYAEHPLKLVVTRALMITADILAGFGFITLLLGLDCVKFLPDEPHIKVRLCFVAGTVLLIAGTPGIIGSVWYAVDVYVERSSLVLHNIFLGIQYKFGWSCWLGMAGSLGCFLAGALLTCCLYLFKDVGPERNYPYAMRKPYSTAGVSMAKSYKAPRTETAKMYAVDTRV" misc_feature 334..396 /gene="Cldn16" /gene_synonym="Pcln1; PLCN-1" /note="propagated from UniProtKB/Swiss-Prot (Q91Y55.1); transmembrane region" misc_feature 355..873 /gene="Cldn16" /gene_synonym="Pcln1; PLCN-1" /note="PMP-22/EMP/MP20/Claudin family;...
xref="RGD:1305000" CDS 426..1100 /gene="Cldn19" /gene_synonym="claudin-19" /codon_start=1 /product="claudin-19 isoform X1" /protein_id="XP_006238818.1" /db_xref="GeneID:298487" /db_xref="RGD:1305000" /translation="MANSGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTGQVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPTAKGRVAISGGALFLLAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAILGGSFLCCTCPEPERANSIPQPYRSGPSTAAREPVVKLSTSVKGPLGV" misc_feature 435..971 /gene="Cldn19" /gene_synonym="claudin-19" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919"...
Cldn22" /note="claudin 22" /db_xref="GeneID:306454" /db_xref="RGD:1305271" exon 1..1027 /gene="Cldn22" /inference="alignment:Splign:2.1.0" CDS 64..726 /gene="Cldn22" /codon_start=1 /product="claudin-22" /protein_id="NP_001103613.1" /db_xref="GeneID:306454" /db_xref="RGD:1305271" /translation="MGLVFRTATQSAALLLSLLGWVLSCLTNYLPHWKNLNLELNEMENWTMGLWKSCVIQEEVGRQCKDFDSFLALPAELQISRILMSLSNGLGLLGLLASGCGLDCLRLGETRKGLKRRLLILGGTLLWTSGVMVLVPVSWVAHMTVQEFWDETVPEIVPRWEFGEALFLGWFAGFCLVLGGCVLHCAACWRPAPPASGHYAVAGLGDHQQHLELKQANPEV" misc_feature <208..612 /gene="Cldn22" /note="PMP-22/EMP/MP20/Claudin family; Region...
gene="Cldn9" /note="upstream in-frame stop codon" CDS 364..1017 /gene="Cldn9" /codon_start=1 /product="claudin-9" /protein_id="NP_001011889.1" /db_xref="GeneID:287099" /db_xref="RGD:1308999" /translation="MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVVALLLALLGLLVAITGAQCTTCVEDEGAKARIVLTAGVLLLLSGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGGLLCCTCPPSHFERPRGPRLGYSIPSRSGASGLDKRDYV" misc_feature 373..852 /gene="Cldn9" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN // REFERENCE 1 (bases 1 to 1432) AUTHORS...
Cldn34b" /inference="alignment:Splign:2.1.0" CDS 260..886 /gene="Cldn34b" /note="claudin-34; rCG36429-like" /codon_start=1 /product="claudin 34B" /protein_id="NP_001395800.1" /db_xref="GeneID:680342" /db_xref="RGD:1592987" /translation="MLMKNCHHQMGGFALTTVAWLLCCISIGLPQWQVWHYEDPVILKPTVAFVGIWRTCIFHTDSNSSNNRLCHQYSYRDSFVPLYIRINQHLLLVSSFLGLFGKITTIIALSNVSMGRVRRNATCNPFSLSGILNIIASSFLYLAVLFNYIAIVRKWRVSFPPSFHMPSHPHTQKMGSAMALAIIAAVFFLLSGTICLSSNLGKSPHSKI" misc_feature 311..850 /gene="Cldn34b" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN // REFERENCE...
CDS 349..1041 /gene="Cldn2" /gene_synonym="RGD1560247" /codon_start=1 /product="claudin-2" /protein_id="NP_001100316.1" /db_xref="GeneID:300920" /db_xref="RGD:1560247" /translation="MASLGVQLVGYILGLLGLLGTSIAMLLPNWRTSSYVGASIVTAVGFSKGLWMECATHSTGITQCDIYSTLLGLPADIQAAQAMMVTSSAMSSLACIISVVGMRCTVFCQESRAKDRVAVVGGVFFILGGILGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISALFSLVAGVILCFSCSPQGNRTNYYDGYQAQPLATRSSPRSAQQPKAKSEFNSYSLTGYV" misc_feature 361..891 /gene="Cldn2" /gene_synonym="RGD1560247" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN // REFERENCE 1...
db_xref="GeneID:103691506" /db_xref="RGD:9242288" CDS 1..588 /gene="LOC103691506" /codon_start=1 /product="claudin-4-like" /protein_id="XP_008767408.1" /db_xref="GeneID:103691506" /db_xref="RGD:9242288" /translation="MASLGQQAVIEFSGSDIIRQSTIWKGLWKSCVAQEGHQTQCKAYDSLLGRPESWQKSRVLMVTCIITAGLGLLLCVVRSKCLKCVEEENTKAKIRMGAGALCLLAGLLVTVSVSWVTHDIMQGFSSRLIPSVQKGKMGAVLYIGWASSGLLLLGGPLLSCNCSPLTDRRHSVRYQAASSSIVCNSGLNPPNAATL" misc_feature <64..438 /gene="LOC103691506" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN //...
db_xref="GeneID:680190" /db_xref="RGD:1595434" CDS 183..809 /gene="Cldn34b3" /codon_start=1 /product="claudin-34-like" /protein_id="XP_001056075.1" /db_xref="GeneID:680190" /db_xref="RGD:1595434" /translation="MLMKNCHYQMGGFALTTVAWLLCCISIGLPQWQVWHYEDPVILKPTVAFVGIWRACIFHTDSNSSNNRLCHQYNYRDSFVPLYIRINQHLLLVSSFLGLFGKITTIIALSNVSMGRVRRNATCNPFSLSGILNIIASSFLYLAVLFNYIAIVRKWGVAFPPSFHMPSHPDIQKMGSAMALAIIAAVFFLLSGTICLSSNLGKSPHSKI" misc_feature 234..773 /gene="Cldn34b3" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 1036 /gene="Cldn34b3" /experiment="...
xref="GeneID:287098" /db_xref="RGD:1308837" CDS 2807..3466 /gene="Cldn6" /codon_start=1 /product="claudin-6 isoform X1" /protein_id="XP_063124616.1" /db_xref="GeneID:287098" /db_xref="RGD:1308837" /translation="MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV" misc_feature 2816..3316 /gene="Cldn6" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 4221 /gene="Cldn6" /...
db_xref="GeneID:315953" /db_xref="RGD:1359696" CDS 109..705 /gene="Cldn18" /codon_start=1 /product="claudin-18 isoform X1" /protein_id="XP_038937476.1" /db_xref="GeneID:315953" /db_xref="RGD:1359696" /translation="MCASRGRFVIAMLQAVRALMIVGIVLGVIGILVSIFALKCIRIGSMDDSAKAKMTLTSGIMFIISGVCAIIGVSVFANMLVTNFWMSTANMYSGMGGMVQTVQTRYTFGAALFVGWIAGGLTLIGGVMMCIACRGLTPDDRNFKAVSYHASGQNVAYKPGGFKASTGFGSNARNKKIYDGGARTEDDEQSHPTKYDYV" misc_feature <145..492 /gene="Cldn18" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 2554 /gene="Cldn18" /experiment="COORDINATES...
db_xref="RGD:1308027" CDS 1052..1747 /gene="Cldn10" /codon_start=1 /product="claudin-10 isoform X1" /protein_id="XP_063130244.1" /db_xref="GeneID:290485" /db_xref="RGD:1308027" /translation="MASTALEIIAFVVSISGWVLVSSTLPTDYWKVSTIDGTVITTATYFANLWKMCVTDSTGVANCKDFPSMLALDGYIQACRGLMIAAVSLGFFGSIFALFGMKCTKVGGSDKAKAKIACLAGVVFILSGLCSMTGCSLYANKITTEFFDPLFMEQKYELGAALFIGWAGASLCIIGGVIFCFSISDNNKTPRMGYTYNGPTSVMSSRTKYQGGEGDFKTTGPSKQFDKNAYV" misc_feature 1061..1588 /gene="Cldn10" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; pfam00822" /db_xref="CDD:395662" polyA_site 1965 /gene="Cldn10" /experiment...
xref="GeneID:100362173" /db_xref="RGD:2318711" CDS 206..841 /gene="Cldn34b4" /codon_start=1 /product="claudin-34-like" /protein_id="XP_006257019.1" /db_xref="GeneID:100362173" /db_xref="RGD:2318711" /translation="MLIKKRYNSQMGGFALTTLAWIICCISIGLPQWRVWHFQDPEVFKPTTAFVGMWRVCTFQHNDNFSNIRICHRYNYHDTFIPLDIRVTQQLLLVASFLGLVGKATTIISLWNVCGGRVRTNTTYNPFGLSGILNIIASSFLCLAVLFNYISIILQEGIVFPPSFNVPSQPDTQEIGSAMALAIIAAVFFLLSGTILLTSTFPREKPMHSKY" misc_feature 260..799 /gene="Cldn34b4" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 1047 /gene="Cldn34b4" /...
xref="GeneID:100362173" /db_xref="RGD:2318711" CDS 282..917 /gene="Cldn34b4" /codon_start=1 /product="claudin-34-like" /protein_id="XP_002730287.1" /db_xref="GeneID:100362173" /db_xref="RGD:2318711" /translation="MLIKKRYNSQMGGFALTTLAWIICCISIGLPQWRVWHFQDPEVFKPTTAFVGMWRVCTFQHNDNFSNIRICHRYNYHDTFIPLDIRVTQQLLLVASFLGLVGKATTIISLWNVCGGRVRTNTTYNPFGLSGILNIIASSFLCLAVLFNYISIILQEGIVFPPSFNVPSQPDTQEIGSAMALAIIAAVFFLLSGTILLTSTFPREKPMHSKY" misc_feature 336..875 /gene="Cldn34b4" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 1123 /gene="Cldn34b4" /...
db_xref="RGD:1309165" CDS 426..1145 /gene="Cldn14" /codon_start=1 /product="claudin-14 isoform X1" /protein_id="XP_006248120.1" /db_xref="GeneID:304073" /db_xref="RGD:1309165" /translation="MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTGIYQCQIYRSLLALPRDLQAARALMVISCLLSGMACACAVVGMKCTRCAKGTPAKTTFAVLGGALFLLAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTLLCLSCQDEGPYRPYQPQSRAGATTTATAPAYRPPAAYKDNRAPSVTSAAHSGYRLNDYV" misc_feature 492..968 /gene="Cldn14" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 1361 /gene="Cldn14" /...
db_xref="RGD:1309165" CDS 286..1005 /gene="Cldn14" /codon_start=1 /product="claudin-14 isoform X1" /protein_id="XP_006248121.1" /db_xref="GeneID:304073" /db_xref="RGD:1309165" /translation="MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTGIYQCQIYRSLLALPRDLQAARALMVISCLLSGMACACAVVGMKCTRCAKGTPAKTTFAVLGGALFLLAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTLLCLSCQDEGPYRPYQPQSRAGATTTATAPAYRPPAAYKDNRAPSVTSAAHSGYRLNDYV" misc_feature 352..828 /gene="Cldn14" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 1221 /gene="Cldn14" /...
db_xref="RGD:1309165" CDS 503..1222 /gene="Cldn14" /codon_start=1 /product="claudin-14 isoform X1" /protein_id="XP_038944338.1" /db_xref="GeneID:304073" /db_xref="RGD:1309165" /translation="MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTGIYQCQIYRSLLALPRDLQAARALMVISCLLSGMACACAVVGMKCTRCAKGTPAKTTFAVLGGALFLLAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTLLCLSCQDEGPYRPYQPQSRAGATTTATAPAYRPPAAYKDNRAPSVTSAAHSGYRLNDYV" misc_feature 569..1045 /gene="Cldn14" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 1438 /gene="Cldn14" /...
GeneID:304388" /db_xref="RGD:1310678" CDS 1591..2274 /gene="Cldn15" /codon_start=1 /product="claudin-15 isoform X1" /protein_id="XP_006249217.1" /db_xref="GeneID:304388" /db_xref="RGD:1310678" /translation="MSIAVETFGFFMSALGLLMLGVTLPNSYWRVSTVHGNVITTNTIFENLWYSCATDSLGVSNCWDFPSMLALSGYVQGCRALMITAILLGFLGLFLGMVGLRCTNVGNIDLSRKAKLLAIAGAFHILAGACGMVAISWYAVNITTDFFNPLYVGTKYELGSALYLGWSASLLSILGGICVFSTCCCDSKEDPATRVGLPYKPSTVVTARATSDESDVSFGKYGKNAYV" misc_feature 1600..2121 /gene="Cldn15" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 3402 /gene="Cldn15" /...
RGD:1359273" CDS 106..867 /gene="Cldnd1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X3" /protein_id="XP_063126481.1" /db_xref="GeneID:288182" /db_xref="RGD:1359273" /translation="MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYQSPAQENSSDANRIAWEDFMGDEADEKTYNDALFRYNGNLGLWRRCITIPKNTHWYAPPERTESFEVVTKCMSFTLNEQFMEKYVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACVCRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLGLPKNVSGEFGWSFCLACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA" misc_feature 154..807 /gene="Cldnd1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site...
CDS 286..978 /gene="Cldn2" /gene_synonym="RGD1560247" /codon_start=1 /product="claudin-2 isoform X1" /protein_id="XP_063135957.1" /db_xref="GeneID:300920" /db_xref="RGD:1560247" /translation="MASLGVQLVGYILGLLGLLGTSIAMLLPNWRTSSYVGASIVTAVGFSKGLWMECATHSTGITQCDIYSTLLGLPADIQAAQAMMVTSSAMSSLACIISVVGMRCTVFCQESRAKDRVAVVGGVFFILGGILGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISALFSLVAGVILCFSCSPQGNRTNYYDGYQAQPLATRSSPRSAQQPKAKSEFNSYSLTGYV" misc_feature 298..828 /gene="Cldn2" /gene_synonym="RGD1560247" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 2972 /...
LOCUS NM_001398571 735 bp mRNA linear ROD 31-MAR-2024 DEFINITION Rattus norvegicus claudin 25 (Cldn25), mRNA. ACCESSION NM_001398571 XM_002729920 VERSION NM_001398571.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was...
CDS 159..989 /gene="Cldnd1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X2" /protein_id="XP_006248268.1" /db_xref="GeneID:288182" /db_xref="RGD:1359273" /translation="MGGDRLENKTSVSVASWSSLNARMDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYQSPAQENSSDANRIAWEDFMGDEADEKTYNDALFRYNGNLGLWRRCITIPKNTHWYAPPERTESFEVVTKCMSFTLNEQFMEKYVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACVCRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLGLPKNVSGEFGWSFCLACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA" misc_feature 276..929 /gene="Cldnd1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919"...
CDS 494..1186 /gene="Cldn2" /gene_synonym="RGD1560247" /codon_start=1 /product="claudin-2 isoform X1" /protein_id="XP_006234324.1" /db_xref="GeneID:300920" /db_xref="RGD:1560247" /translation="MASLGVQLVGYILGLLGLLGTSIAMLLPNWRTSSYVGASIVTAVGFSKGLWMECATHSTGITQCDIYSTLLGLPADIQAAQAMMVTSSAMSSLACIISVVGMRCTVFCQESRAKDRVAVVGGVFFILGGILGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISALFSLVAGVILCFSCSPQGNRTNYYDGYQAQPLATRSSPRSAQQPKAKSEFNSYSLTGYV" misc_feature 506..1036 /gene="Cldn2" /gene_synonym="RGD1560247" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" polyA_site 3180 /...
start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_006248266.3" /db_xref="GeneID:288182" /db_xref="RGD:1359273" /translation="MLSSGSSSFFTGVPTSPTRPLGSGPLWPGLGWGSYGGGGLCREVRQRRRGESRLLWSELEGEAGGVRGWAYAGDRLENKTSVSVASWSSLNARMDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYQSPAQENSSDANRIAWEDFMGDEADEKTYNDALFRYNGNLGLWRRCITIPKNTHWYAPPERTESFEVVTKCMSFTLNEQFMEKYVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACVCRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLGLPKNVSGEFGWSFCLACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA" misc_feature 417..1070 /gene="Cldnd1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_...
LOCUS NM_001408916 858 bp mRNA linear ROD 31-MAR-2024 DEFINITION Rattus norvegicus claudin 34C4 (Cldn34c4), mRNA. ACCESSION NM_001408916 XM_006257208 VERSION NM_001408916.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ0121.1. On Jul...
stop codon" CDS 250..1110 /gene="Cldn10" /codon_start=1 /product="claudin-10" /protein_id="NP_001099528.1" /db_xref="GeneID:290485" /db_xref="RGD:1308027" /translation="MSRAQISALVCGVGGFGALVAATTSNEWKVTTRASSVITATWVYQGLWMNCAAGSMASTALEIIAFVVSISGWVLVSSTLPTDYWKVSTIDGTVITTATYFANLWKMCVTDSTGVANCKDFPSMLALDGYIQACRGLMIAAVSLGFFGSIFALFGMKCTKVGGSDKAKAKIACLAGVVFILSGLCSMTGCSLYANKITTEFFDPLFMEQKYELGAALFIGWAGASLCIIGGVIFCFSISDNNKTPRMGYTYNGPTSVMSSRTKYQGGEGDFKTTGPSKQFDKNAYV" misc_feature 424..951 /gene="Cldn10" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon...
LOCUS XM_063280263 1206 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin 34A (Cldn34a), transcript variant X2, mRNA. ACCESSION XM_063280263 VERSION XM_063280263.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic...
LOCUS XM_063280262 1104 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin 34A (Cldn34a), transcript variant X1, mRNA. ACCESSION XM_063280262 VERSION XM_063280262.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic...
LOCUS XM_039087376 800 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin domain containing 2 (Cldnd2), transcript variant X1, mRNA. ACCESSION XM_039087376 VERSION XM_039087376.2 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived...
Splign:2.1.0" CDS 211..972 /gene="Cldnd1" /codon_start=1 /product="claudin domain-containing protein 1" /protein_id="NP_001006956.2" /db_xref="GeneID:288182" /db_xref="RGD:1359273" /translation="MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYQSPAQENSSDANRIAWEDFMGDEADEKTYNDALFRYNGNLGLWRRCITIPKNTHWYAPPERTESFEVVTKCMSFTLNEQFMEKYVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACVCRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLGLPKNVSGEFGWSFCLACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA" misc_feature 259..912 /gene="Cldnd1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon 503..613 /gene...
LOCUS XM_008773232 1258 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin 34D (Cldn34d), transcript variant X1, mRNA. ACCESSION XM_008773232 VERSION XM_008773232.4 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic...
LOCUS XM_039100424 889 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin 34C4 (Cldn34c4), transcript variant X1, mRNA. ACCESSION XM_039100424 VERSION XM_039100424.2 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic...
LOCUS XM_006236052 3722 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin 12 (Cldn12), transcript variant X2, mRNA. ACCESSION XM_006236052 VERSION XM_006236052.5 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic...
LOCUS XM_006236053 3815 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus claudin 12 (Cldn12), transcript variant X1, mRNA. ACCESSION XM_006236053 VERSION XM_006236053.5 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic...
LOCUS NM_001109415 1088 bp mRNA linear ROD 01-APR-2024 DEFINITION Rattus norvegicus claudin 34E (Cldn34e), mRNA. ACCESSION NM_001109415 XM_001057406 XM_006256958 VERSION NM_001109415.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
misc_feature 257..646 /gene="Tmem235" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon 351..488 /gene="Tmem235" /inference="alignment:Splign:2.1.0" exon 489..1789 /gene="Tmem235" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1789) AUTHORS Maher,G.J., Hilton,E.N., Urquhart,J.E., Davidson,A.E., Spencer,H.L., Black,G.C. and Manson,F.D. TITLE The cataract-associated protein TMEM114, and TMEM235, are glycosylated transmembrane proteins that are distinct from claudin family members JOURNAL FEBS Lett 585 (14), 2187-2192 (2011)...
note="PMP-22/EMP/MP20/Claudin tight junction; Region: Claudin_2; pfam13903" /db_xref="CDD:372799" exon 351..431 /gene="Tmem235" /inference="alignment:Splign:2.1.0" exon 432..569 /gene="Tmem235" /inference="alignment:Splign:2.1.0" exon 570..1870 /gene="Tmem235" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1870) AUTHORS Maher,G.J., Hilton,E.N., Urquhart,J.E., Davidson,A.E., Spencer,H.L., Black,G.C. and Manson,F.D. TITLE The cataract-associated protein TMEM114, and TMEM235, are glycosylated transmembrane proteins that are distinct from claudin family members JOURNAL FEBS...
translation="MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRKPANLDSWHCESTLGSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLFAAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDYY" misc_feature 291..740 /gene="Tmem47" /gene_synonym="RGD1564799" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon 457..597 /gene="Tmem47" /gene_synonym="RGD1564799" /inference="alignment:Splign:2.1.0" exon 598..4130 /gene="Tmem47" /gene_synonym="RGD1564799" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 4130) AUTHORS Bruggeman LA,...
PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon 757..837 /gene="Tmem114" /gene_synonym="RGD1560593" /inference="alignment:Splign:2.1.0" exon 838..975 /gene="Tmem114" /gene_synonym="RGD1560593" /inference="alignment:Splign:2.1.0" exon 976..1449 /gene="Tmem114" /gene_synonym="RGD1560593" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1449) AUTHORS Maher GJ, Hilton EN, Urquhart JE, Davidson AE, Spencer HL, Black GC and Manson FD. TITLE The cataract-associated protein TMEM114, and TMEM235, are glycosylated transmembrane proteins that are distinct from claudin family...
misc_feature 195..812 /gene="Tmem182" /gene_synonym="RGD1563696" /note="PMP-22/EMP/MP20/Claudin tight junction; Region: Claudin_2; pfam13903" /db_xref="CDD:372799" exon 285..384 /gene="Tmem182" /gene_synonym="RGD1563696" /inference="alignment:Splign:2.1.0" exon 385..483 /gene="Tmem182" /gene_synonym="RGD1563696" /inference="alignment:Splign:2.1.0" exon 484..621 /gene="Tmem182" /gene_synonym="RGD1563696" /inference="alignment:Splign:2.1.0" exon 622..2708 /gene="Tmem182" /gene_synonym="RGD1563696" /inference="alignment:Splign:2.1.0" ORIGIN //...
db_xref="RGD:1310294" /translation="MLRCGLACERCRWILPLLLLSAIAFDIIALSGRGWLQSSNHIQTSSLWWRCFDEGGGSGSYDDGCQSLMEYAWGRAAAATLFCGFIILVICFILSFFALCGPQMLVFLRVIGGLLALAAVFQIISLVIYPVKYTQTFRLHDNPAVNYIYNWAYGFGWAATIILIGCSFFFCCLPNYEDDLLGNAKPRYFYTSA" misc_feature 207..596 /gene="Perp" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" exon 319..459 /gene="Perp" /inference="alignment:Splign:2.1.0" exon 460..1872 /gene="Perp" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1890) AUTHORS Fouillade C, Baron-Menguy C, Domenga-Denier V, Thibault C,...
misc_feature 137..802 /gene="LOC102554937" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN //...
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0.000 | 0.000 | search_start;
0.103 | 0.103 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:claudin)%7C(nt:claudin)%7C(aa:claudin))?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.187 | 0.084 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:claudin)%7C(nt:claudin)%7C(aa:claudin))?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.192 | 0.005 | cgi_end;
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GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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