2024-04-27 00:22:06, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001109402 1008 bp mRNA linear ROD 22-MAR-2023 DEFINITION Rattus norvegicus claudin 34D (Cldn34d), mRNA. ACCESSION NM_001109402 XM_001056879 VERSION NM_001109402.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1008) AUTHORS Gaudet P, Livstone MS, Lewis SE and Thomas PD. TITLE Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium JOURNAL Brief Bioinform 12 (5), 449-462 (2011) PUBMED 21873635 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473966.2. On Oct 4, 2007 this sequence version replaced XM_001056879.1. ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, longest protein ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1008 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="X" /map="Xq21" gene 1..1008 /gene="Cldn34d" /note="claudin 34D" /db_xref="GeneID:680370" /db_xref="RGD:1592959" exon 1..145 /gene="Cldn34d" /inference="alignment:Splign:2.1.0" exon 146..1008 /gene="Cldn34d" /inference="alignment:Splign:2.1.0" misc_feature 147..149 /gene="Cldn34d" /note="upstream in-frame stop codon" CDS 174..806 /gene="Cldn34d" /codon_start=1 /product="claudin 34D" /protein_id="NP_001102872.1" /db_xref="GeneID:680370" /db_xref="RGD:1592959" /translation="
MARKHAKRQLGGFAASTIAWFLCSVSMGLPQWRVWFFQDPMESKPGMTLVGMWRTCVYHQKSNSTFNRVCYKYTYQDTFIPLDIRVAQHLLLIASLLGIISIISVIIALWKLYSGRLRKKVAFNPFRLPGILNVIASSFVLLSILYNYLSIIRKDGIAFPPSFHTPSFPDSQKVGTALAMATLSCFLFLLGGIIPLSFTLPPRCRVRYNT"
ORIGIN
taccacacacctgactatgaagtcaccatccattcttgaaggacactaggggagccatattctctttagcactactggtccatctatcttcacattctgccacataaggggttacaaattcatttggagacagcattataggcaattgacgagagataactgtcaccgtgataatggccagaaaacatgccaagcggcaactaggaggttttgctgcaagtaccatagcatggttcctttgcagtgtctctatgggcctccctcaatggcgagtgtggttctttcaagatcccatggagtccaagcctggcatgaccttagtaggcatgtggagaacctgtgtttaccaccagaaaagtaattccacctttaacagagtgtgttacaaatacacctaccaggataccttcatccctctggatattcgagttgcccaacatctgctactcatcgcaagcctacttggcattatttccataatttccgttatcattgctctttggaaattatactcagggagactccggaagaaagtcgccttcaatccattccgccttccagggattctgaacgtcattgctagcagctttgtcttactttccatcttgtacaattatttatcgatcattcgcaaggatgggattgccttccctccatctttccacacaccctccttcccagatagtcaaaaagttggcactgcactggcaatggcaactctttcctgtttcttatttcttctaggtggtataatcccactttctttcactcttcccccacgttgccgagtgcgctataatacttaaaagtaaatttccaacttatatagacttgaaaatctaaaattaccattagaaattgcaagcactcttcaaatacctacttaaaatttccagatgaaaaaccatgcccaatgatgacaagtaggcctcctgatatttcctgtctcagttgctccatcagtttcattggcttattgattttcattaaataaaatctttcccaatt
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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