GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2025-07-15 10:44:24, GGRNA : RefSeq release 229 (Mar, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens colipase (CLPS), transcript variant 1, mRNA. (538 bp)
colipase preproprotein" /codon_start=1 /product="colipase isoform 1 preproprotein" /protein_id="NP_001823.1" /db_xref="CCDS:CCDS4811.1" /db_xref="GeneID:1208" /db_xref="HGNC:HGNC:2085" /db_xref="MIM:120105" /translation="MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMASENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ" sig_peptide 36..86 /gene="CLPS" /inference="COORDINATES: ab initio prediction:SignalP:4.0" proprotein 87..371 /gene="CLPS" /product="colipase isoform 1 proprotein" misc_feature 87..371 /gene="CLPS" /note="Colipase; Region: COLIPASE; smart00023" /db_xref="CDD...
AA_position 78
NM_001832.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens metallothionein 4 (MT4), mRNA. (270 bp)
gene="MT4" /gene_synonym="MT-4; MT-IV; MTIV" /note="metallothionein-IV" /codon_start=1 /product="metallothionein-4" /protein_id="NP_116324.2" /db_xref="CCDS:CCDS42165.1" /db_xref="GeneID:84560" /db_xref="HGNC:HGNC:18705" /db_xref="MIM:606206" /translation="MDPRECVCMSGGICMCGDNCKCTTCNCKTYWKSCCPCCPPGCAKCARGCICKGGSDKCSCCP" misc_feature 57..239 /gene="MT4" /gene_synonym="MT-4; MT-IV; MTIV" /note="Metallothionein; Region: Metallothio; pfam00131" /db_xref="CDD:395080" variation 57 /gene="MT4" /gene_synonym="MT-4; MT-IV; MTIV" /replace="a" /replace="g" /db_xref="dbSNP:768016689" variation 58 /gene="...
AA_position 35
Synonym: MT-4; MT-IV; MTIV
NM_032935.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens zinc finger protein 28 (ZNF28), transcript variant 9, mRNA. (397 bp)
is encoded by transcript variant 9; zinc finger protein KOX24" /codon_start=1 /product="zinc finger protein 28 isoform 9" /protein_id="NP_001356697.1" /db_xref="GeneID:7576" /db_xref="HGNC:HGNC:13073" /db_xref="MIM:620466" /translation="MALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLGEDNLLGMCPCVSLYFLLLPLGSHILT" misc_feature 143..>265 /gene="ZNF28" /gene_synonym="KOX24" /note="krueppel associated box; Region: KRAB; smart00349" /db_xref="CDD:214630" variation 125 /gene="ZNF28" /gene_synonym="KOX24" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:2063148297" variation 129 /gene="ZNF28" /...
AA_position 56
Synonym: KOX24
NM_001369768.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens double homeobox protein 1-like (LOC124907508), mRNA. (594 bp)
map="15" gene 1..594 /gene="LOC124907508" /note="double homeobox protein 1-like" /db_xref="GeneID:124907508" CDS 1..594 /gene="LOC124907508" /codon_start=1 /product="double homeobox protein 1-like" /protein_id="NP_001408938.1" /db_xref="GeneID:124907508" /translation="MPAEVHGSPRASLCPCPSVKFRPGLPAMALLTALDDTLPEEAQGPGRRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGFPESRIQIWFQNRRARHRGQSGRAPTQASIRCNAAPIG" misc_feature 160..294 /gene="LOC124907508" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 364..531 /gene...
AA_position 14
NM_001422009.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens transmembrane protein 138 (TMEM138), transcript variant 6, mRNA. (1775 bp)
db_xref="CCDS:CCDS91484.1" /db_xref="GeneID:51524" /db_xref="HGNC:HGNC:26944" /db_xref="MIM:614459" /translation="MLQTSNYSLVLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMFFNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNSFIWTDGLQMLFVFQRLGKDQSKVRPLSGPTCVSFSEGLDAGFPDLSQLAWDGCDSHTRNRRDYCPCPC" misc_feature 202..204 /gene="TMEM138" /gene_synonym="HSPC196" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9NPI0.1); glycosylation site" misc_feature 205..267 /gene="TMEM138" /gene_synonym="HSPC196" /note="propagated from UniProtKB/Swiss-Prot...
AA_position 173
Synonym: HSPC196
NM_001410999.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens uncharacterized protein (LOC124906621), mRNA. (918 bp)
and 100% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:124906621" CDS 1..918 /gene="LOC124906621" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_047300967.1" /db_xref="GeneID:124906621" /translation="MLKSWTSAAQNGTFRGHRTVADTVRLVKEAPCCSRSLMRPCPCDRKDKLQHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKHPCPCDGEDRLRHAEGSRLRGSEAGGKRCVCGPRAAGNAEAGSQEGSVSPSRPCRHLQARSPNPACETAGIHCFKPIRLESFVLAAPKASHSSALSTGSVSAGKVGRPHRGTAAGPCKTQGGRASMSEGRRQMPQGITSCMLHLDGKTQKPLPTAGSAD" ORIGIN //...
AA_position 41
XM_047445011.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens CD320 molecule (CD320), transcript variant 2, mRNA. (1127 bp)
receptor; soluble CD320" /codon_start=1 /product="CD320 antigen isoform 2 precursor" /protein_id="NP_001159367.1" /db_xref="CCDS:CCDS54210.1" /db_xref="GeneID:51293" /db_xref="HGNC:HGNC:16692" /db_xref="MIM:606475" /translation="MSGGWMAQVGAWRTGALGLAGLGLGLEAAASPLSTPTSAQAAGIEPCTQKGQCPPPPGLPCPCTGVSDCSGGTDKKLRNCSRLACLAGELRCTLSDDCIPLTWRCDGHPDCPDSSDELGCGTNEILPEGDATTMGPPVTLESVTSLRNATTMGPPVTLESVPSVGNATSSSAGDQSGSPTAYGVIAAAAVLSASLVTATLLLLSWLRAQERLRPLGLLVAMKESLLLSEQKTSLP" sig_peptide 69..158 /gene="CD320" /gene_synonym="8D6; 8D6A; sCD320; TCBLR; TCII-R; TCN2R" /inference="COORDINATES: ab initio...
AA_position 66
Synonym: 8D6; 8D6A; sCD320; TCBLR; TCII-R; TCN2R
NM_001165895.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens SLX1A-like (LOC130134321), transcript variant 2, mRNA. (843 bp)
note="isoform 2 is encoded by transcript variant 2" /codon_start=1 /product="SLX1A-like isoform 2" /protein_id="NP_001408593.1" /db_xref="GeneID:130134321" /translation="MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET" misc_feature 299..508 /gene="LOC130134321" /note="Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its eukaryotic homologs; Region: GIY-YIG_SLX1; cd10455" /db_xref="CDD:198402" misc_feature order(305..313,353..361) /gene="...
AA_position 121
NM_001421664.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens CD320 molecule (CD320), transcript variant 1, mRNA. (1253 bp)
start=1 /product="CD320 antigen isoform 1 precursor" /protein_id="NP_057663.1" /db_xref="CCDS:CCDS12198.1" /db_xref="GeneID:51293" /db_xref="HGNC:HGNC:16692" /db_xref="MIM:606475" /translation="MSGGWMAQVGAWRTGALGLAGLGLGLEAAASPLSTPTSAQAAGPSSGSCPPTKFQCRTSGLCVPLTWRCDRDLDCSDGSDEEECRIEPCTQKGQCPPPPGLPCPCTGVSDCSGGTDKKLRNCSRLACLAGELRCTLSDDCIPLTWRCDGHPDCPDSSDELGCGTNEILPEGDATTMGPPVTLESVTSLRNATTMGPPVTLESVPSVGNATSSSAGDQSGSPTAYGVIAAAAVLSASLVTATLLLLSWLRAQERLRPLGLLVAMKESLLLSEQKTSLP" sig_peptide 69..158 /gene="CD320" /gene_synonym="8D6; 8D6A; sCD320; TCBLR; TCII-R; TCN2R" /inference="COORDINATES: ab initio...
AA_position 108
Synonym: 8D6; 8D6A; sCD320; TCBLR; TCII-R; TCN2R
NM_016579.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens metallothionein 3 (MT3), mRNA. (406 bp)
GIFB; GRIF; ZnMT3" /note="metallothionein 3 (growth inhibitory factor (neurotrophic)); metallothionein-III" /codon_start=1 /product="metallothionein-3" /protein_id="NP_005945.1" /db_xref="CCDS:CCDS10762.1" /db_xref="GeneID:4504" /db_xref="HGNC:HGNC:7408" /db_xref="MIM:139255" /translation="MDPETCPCPSGGSCTCADSCKCEGCKCTSCKKSCCSCCPAECEKCAKDCVCKGGEAAEAEAEKCSCCQ" misc_feature 64..267 /gene="MT3" /gene_synonym="GIF; GIFB; GRIF; ZnMT3" /note="Metallothionein; Region: Metallothio; pfam00131" /db_xref="CDD:395080" misc_feature 64..153 /gene="MT3" /gene_synonym="GIF; GIFB; GRIF; ZnMT3" /note="propagated...
AA_position 6
Synonym: GIF; GIFB; GRIF; ZnMT3
NM_005954.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens solute carrier family 22 member 31 (SLC22A31), transcript variant 4, mRNA. (2153 bp)
LLFWGFPALFPESPCWLLATGQVARARKILWRFAEASGVGPGDSSLEENSLATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAPQVPTFYLPYFLEAGLEAAALVFLLLTADCCGRRPVLLLGTMVTGLASLLLLAGAQCELGAPQAIQEPLCLGRRSATPGGHSADRGAAWGGSPRPAAVCFPLILVEGPKGSFVTGLKSARLDCAVPLCPGAPGLPGCVRTQQPLRGRGLPHGDQGGRAGPGAGGRVPGPGSRPPGHPARPAGLLPATSRLRLPCCPCPAVCPAAA" misc_feature 1278 /gene="SLC22A31" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature 1062 /gene="SLC22A31" /note="cation transport protein; Region: 2A0119; TIGR00898" /db_xref="CDD:273328" variation 718 /gene="SLC22A31" /replace="a" /replace="...
AA_position 338
NM_001384765.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens keratin associated protein 4-16 (KRTAP4-16), mRNA. (708 bp)
product="putative keratin-associated protein 4-16" /protein_id="NP_001382996.1" /db_xref="CCDS:CCDS92304.1" /db_xref="GeneID:85354" /db_xref="HGNC:HGNC:18921" /translation="MCSSKMPCSPSASSLCAASPPNCCHPSCCQTTCCRTTSCSHSCSVSSCCRPQCCHSVCCQPTCCRPSCCQTTCCRTTCCHPSCCVSSCCRPQCCHSVCFQPTCCHPSCCISSSCCPSCCESSCCCPCCCLRPVCGRVSCHVTCYHPTCVISTCPHPLCCASPPLPLPFPSPPVPLPFFLSLALPSPPRPSPPLLSPVLIPSPSPSPSLPSLSPPLPSPPLPSPHFPSVNPKSMLQ" misc_feature 1..396 /gene="KRTAP4-16" /gene_synonym="KAP4A; KRTAP4-16P; KRTAP4P1" /note="propagated from UniProtKB/Swiss-Prot (G5E9R7.1); Region: 16 X 5 AA repeats of C-C-[GIKRQVHEML]-...
AA_position 125
Synonym: KAP4A; KRTAP4-16P; KRTAP4P1
NM_001396067.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 5 (SCYGR5), mRNA. (258 bp)
KRTAP28-5" /note="keratin associated protein 28-5" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 5" /protein_id="NP_001382335.1" /db_xref="CCDS:CCDS92956.1" /db_xref="GeneID:112441437" /db_xref="HGNC:HGNC:34224" /translation="MGCCGCGGCGGCGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCCSCGCGCGKGCCQQKGCCQKQCCC" misc_feature 10..207 /gene="SCYGR5" /gene_synonym="KRTAP28-5" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF46.1); Region: 10 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..258 /gene="SCYGR5" /gene_synonym="KRTAP28-5" /inference="alignment:...
AA_position 38
Synonym: KRTAP28-5
NM_001395406.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens WD repeat domain 72 (WDR72), transcript variant 2, mRNA. (4248 bp)
codon_start=1 /product="WD repeat-containing protein 72 isoform b" /protein_id="NP_001264105.1" /db_xref="CCDS:CCDS73730.1" /db_xref="GeneID:256764" /db_xref="HGNC:HGNC:26790" /db_xref="MIM:613214" /translation="MAGVPPPAWLPPCSLISDCCASNQRDSVGVGPSEPAPVSPVKHDSNSNSANFQDVEDMPDRCALEESESPGEPRHHSWIAKVCPCKVS" variation 24..25 /gene="WDR72" /gene_synonym="AI2A3" /replace="" /replace="at" /db_xref="dbSNP:1893095803" variation 24 /gene="WDR72" /gene_synonym="AI2A3" /replace="a" /replace="g" /db_xref="dbSNP:1394115002" variation 26 /gene="WDR72" /gene_synonym="AI2A3" /replace="c" /replace="g" /db_xref="...
AA_position 83
Synonym: AI2A3
NM_001277176.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 1, mRNA. (1928 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform alpha precursor" /protein_id="NP_954637.1" /db_xref="CCDS:CCDS7207.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNK" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 156..359 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /product...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_199168.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 2, mRNA. (3537 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform beta precursor" /protein_id="NP_000600.1" /db_xref="CCDS:CCDS44373.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKRFKM" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 156..371 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_000609.7 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 7 (SCYGR7), mRNA. (291 bp)
note="keratin associated protein 28-7" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 7" /protein_id="NP_001382337.1" /db_xref="CCDS:CCDS92959.1" /db_xref="GeneID:112441438" /db_xref="HGNC:HGNC:34226" /translation="MGCCGCGSCGGCGGGCGGCGGGCGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCGSCGCGCGKGCCQQKGCCQKQCCC" misc_feature 10..240 /gene="SCYGR7" /gene_synonym="KRTAP28-7" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF01.1); Region: 14 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..291 /gene="SCYGR7" /gene_synonym="KRTAP28-7" /inference="alignment:...
AA_position 49
Synonym: KRTAP28-7
NM_001395408.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 3 (SCYGR3), mRNA. (303 bp)
note="keratin associated protein 28-3" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 3" /protein_id="NP_001382333.1" /db_xref="CCDS:CCDS92954.1" /db_xref="GeneID:112441429" /db_xref="HGNC:HGNC:34222" /translation="MGCCGCGSCGGCGGGCGGCGGGCGGGCGGGCGGVCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCRSCGCGCRKGCCQQKCCCQKQCCC" misc_feature 10..246 /gene="SCYGR3" /gene_synonym="KRTAP28-3" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF60.1); Region: 13 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..303 /gene="SCYGR3" /gene_synonym="KRTAP28-3" /inference="alignment...
AA_position 53
Synonym: KRTAP28-3
NM_001395404.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens colipase like 2 (CLPSL2), transcript variant 2, mRNA. (426 bp)
colipase-like protein 2" /codon_start=1 /product="colipase-like protein 2 isoform b precursor" /protein_id="NP_997292.2" /db_xref="CCDS:CCDS4810.2" /db_xref="GeneID:389383" /db_xref="HGNC:HGNC:21250" /translation="MAAALALVAGVLSGAVLPLWSALPQYKKKITDRCFHHSECYSGCCLMDLDSGGAFCAPRARITMICLPQTKGATNIICPCRMGLTCISKDLMCSRRCHMI" sig_peptide 22..84 /gene="CLPSL2" /gene_synonym="AAAL3045; C6orf126; dJ510O8.5; UNQ3045" /note="/evidence=ECO:0000269|PubMed:15340161; propagated from UniProtKB/Swiss-Prot (Q6UWE3.3)" mat_peptide 85..321 /gene="CLPSL2" /gene_synonym="AAAL3045; C6orf126; dJ510O8.5; UNQ3045" /product="...
AA_position 78
Synonym: AAAL3045; C6orf126; dJ510O8.5; UNQ3045
NM_207409.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 5, mRNA. (3127 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform 5 precursor" /protein_id="NP_001264919.1" /db_xref="CCDS:CCDS60518.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHYCTCLIRVSFHGATPLTQGSWVLYSLSCAGGETGLREPGPMVSPRVESHQEGRLGVPGPVNLGKA" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 156..401 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF;...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_001277990.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 8 (SCYGR8), mRNA. (327 bp)
keratin associated protein 28-8" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 8" /protein_id="NP_001382338.1" /db_xref="CCDS:CCDS92960.1" /db_xref="GeneID:112441432" /db_xref="HGNC:HGNC:34227" /translation="MGCCGCGGCGGGCGGCSGGCGGGCGGGCGGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCSSCGCGYGKGCCQQKGCCQQKCCCQKQCCC" misc_feature 10..252 /gene="SCYGR8" /gene_synonym="KRTAP28-8" /note="propagated from UniProtKB/Swiss-Prot (A0A286YFG1.1); Region: 12 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..327 /gene="SCYGR8" /gene_synonym="KRTAP28-8" /inference="...
AA_position 55
Synonym: KRTAP28-8
NM_001395409.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens prokineticin 2 (PROK2), transcript variant 2, mRNA. (1492 bp)
Bv8 homolog" /codon_start=1 /product="prokineticin-2 isoform b precursor" /protein_id="NP_068754.1" /db_xref="CCDS:CCDS2916.1" /db_xref="GeneID:60675" /db_xref="HGNC:HGNC:18455" /db_xref="MIM:607002" /translation="MRSLCCAPPPLLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKVPFFGRRMHHTCPCLPGLACLRTSFNRFICLAQK" sig_peptide 97..177 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 163..411 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /note="Region: Prokineticin; pfam06607" /db_xref="CDD:148298" mat_...
AA_position 86
Synonym: BV8; HH4; KAL4; MIT1; PK2
NM_021935.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens uncharacterized protein (LOC124904103), mRNA. (4439 bp)
variation 3113 /gene="LOC124904103" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:7222517" CDS 3114..4439 /gene="LOC124904103" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_047293220.1" /db_xref="GeneID:124904103" /translation="MSPAGGWVSMSSDLRRGRCHRQQVWCPCPQISEGDDVTGRWFGVHVLRSQKGTMSPAAGWVSMSSDLRRRRCHRQVVGYPCPQISEGDDVTGRWLGVHVLRSQKETMSPAGGLVSISSDLRRRRCHRQVAGYQCPQISEGDDVTGRWLGVHVLRSQKETMSPAGGLVSMSSDLRRRRCHRQVVGCPCPQISEEDDVTGRWLGIHVLRSQKGTMSLAGGLVFMSSDLRRRQCHQQVVWCPCPQISEGDNVTGRWLDIHVLRSQKGTISPAGGWVFMSSDLRRRRCHRQVVWCPCPQISEGDDVTGRWLGIHVLRSQKGTMSLAGGLVFMSSDLRRRQCHRQISE...
AA_position 26
XM_047437264.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens SLX1A-like (LOC130134321), transcript variant 1, mRNA. (1185 bp)
id="NP_001408589.1" /db_xref="GeneID:130134321" /translation="MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQDLCLPPPPHVPLAFGPPPPQAPAPRRRAGPFDDAEPEPDQGDPGACCSLCAQTIQDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET" misc_feature 299..529 /gene="LOC130134321" /note="Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its eukaryotic homologs; Region: GIY-YIG_SLX1; cd10455" /db_xref="CDD:198402" misc_feature order(305..313,353..361) /gene="...
AA_position 235
NM_001421660.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens coiled-coil domain containing 188 (CCDC188), mRNA. (1476 bp)
coiled-coil domain-containing protein 188" /protein_id="NP_001352821.1" /db_xref="CCDS:CCDS93123.1" /db_xref="GeneID:388849" /db_xref="HGNC:HGNC:51899" /translation="MEGLKTLGPCGHPHPQCPPTPASSSHGGGLDQPCQGFVGWPCLGPISSAHSVQSQRPFPVPGAGGSGPTVEGEAPGLFLSSQEQRARDTEGPRQGDLEAGLGWGWPLHPGSNQGAPRQGGSIGSGTRPCPCPPLSREGGALASPRVALSQLQCGLLGSAEQSFLQLEQENHSLKRQNQELREQLGALLGPGQQFLPLCPEHSSCTALAWPPDPAGTQPLGNRAPLQLLRRELCQGQEAFVQQSQNELQQIRLCFERKKMVITEVWDNVAEMHMALNNQATGLLNLKKDIRGVLDQMEDIQLEILRERAQCRTRARKEKQMASMSKGRPKLGSSKGLAGQLWLLTLRLLLGALLVWTAAYVYVVNPTPFEGLVPPLLSRATVWKLRALLDPFLRLKVDGFLPF" misc_feature 70..159 /gene="...
AA_position 129
NM_001365892.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 3, mRNA. (524 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform gamma precursor" /protein_id="NP_001029058.1" /db_xref="CCDS:CCDS31186.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKEKIGKKKRQKKRKAAQKRKN" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 156..449 /gene="CXCL12" /gene_synonym="IRH; PBSF;...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_001033886.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens laminin subunit alpha 4 (LAMA4), transcript variant 5, mRNA. (630 bp)
laminin, alpha 4" /codon_start=1 /product="laminin subunit alpha-4 isoform 3 precursor" /protein_id="NP_001098679.1" /db_xref="CCDS:CCDS43492.1" /db_xref="GeneID:3910" /db_xref="HGNC:HGNC:6484" /db_xref="MIM:600133" /translation="MALSSAWRSVLPLWLLWSAACSRAASGDDNAFPFDIEGSSAVGRQDPPETSEPRVALGRLPPAAEVQCPCHCHPAGAPAPPRAVPHSSFSLSPPLSSPQCLESFTWARSVRKLEIKSFPL" sig_peptide 268..339 /gene="LAMA4" /gene_synonym="CMD1JJ; LAMA3; LAMA4*-1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 349..627 /gene="LAMA4" /gene_synonym="CMD1JJ; LAMA3; LAMA4*-1" /product="laminin subunit alpha-4...
AA_position 68
Synonym: CMD1JJ; LAMA3; LAMA4*-1
NM_001105209.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens laminin subunit alpha 4 (LAMA4), transcript variant 4, mRNA. (613 bp)
laminin, alpha 4" /codon_start=1 /product="laminin subunit alpha-4 isoform 3 precursor" /protein_id="NP_001098678.1" /db_xref="CCDS:CCDS43492.1" /db_xref="GeneID:3910" /db_xref="HGNC:HGNC:6484" /db_xref="MIM:600133" /translation="MALSSAWRSVLPLWLLWSAACSRAASGDDNAFPFDIEGSSAVGRQDPPETSEPRVALGRLPPAAEVQCPCHCHPAGAPAPPRAVPHSSFSLSPPLSSPQCLESFTWARSVRKLEIKSFPL" sig_peptide 251..322 /gene="LAMA4" /gene_synonym="CMD1JJ; LAMA3; LAMA4*-1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 332..610 /gene="LAMA4" /gene_synonym="CMD1JJ; LAMA3; LAMA4*-1" /product="laminin subunit alpha-4...
AA_position 68
Synonym: CMD1JJ; LAMA3; LAMA4*-1
NM_001105208.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens prokineticin 2 (PROK2), transcript variant 1, mRNA. (1555 bp)
start=1 /product="prokineticin-2 isoform a precursor" /protein_id="NP_001119600.1" /db_xref="CCDS:CCDS46868.1" /db_xref="GeneID:60675" /db_xref="HGNC:HGNC:18455" /db_xref="MIM:607002" /translation="MRSLCCAPPPLLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKNNFGNGRQERRKRKRSKRKKEVPFFGRRMHHTCPCLPGLACLRTSFNRFICLAQK" sig_peptide 97..177 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 163..474 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /note="Region: Prokineticin; pfam06607" /db_xref="CDD:148298" mat...
AA_position 107
Synonym: BV8; HH4; KAL4; MIT1; PK2
NM_001126128.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cornichon family member 4 (CNIH4), transcript variant 5, mRNA. (822 bp)
isoform 5" /protein_id="NP_001264129.1" /db_xref="CCDS:CCDS60429.1" /db_xref="GeneID:29097" /db_xref="HGNC:HGNC:25013" /db_xref="MIM:617483" /translation="MEAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSGSNCPC" misc_feature 53..436 /gene="CNIH4" /gene_synonym="CNIH-4; HSPC163" /note="Cornichon protein; Region: Cornichon; pfam03311" /db_xref="CDD:460883" misc_feature 59..121 /gene="CNIH4" /gene_synonym="CNIH-4; HSPC163" /note="propagated from UniProtKB/Swiss-Prot (Q9P003.1); transmembrane region" misc_feature...
AA_position 135
Synonym: CNIH-4; HSPC163
NM_001277200.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 4, mRNA. (1197 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform delta precursor" /protein_id="NP_001171605.1" /db_xref="CCDS:CCDS53527.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNNLISAAPAGKRVIAGARALHPSPPRACPTARALCEIRLWPPPEWSWPSPGDV" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 156..512 /gene="CXCL12" /gene_...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_001178134.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens natural killer cell granule protein 7 (NKG7), transcript variant 2, mRNA. (755 bp)
sequence" /codon_start=1 /product="protein NKG7 isoform 2" /protein_id="NP_001350622.1" /db_xref="CCDS:CCDS86796.1" /db_xref="GeneID:4818" /db_xref="HGNC:HGNC:7830" /db_xref="MIM:606008" /translation="MELCRSLALLGGSLGLMFCLIALSTDFWFEAVGPTHSAHSGLWPTGHGDIISGHGPLVSTTAAFAAGKDSGLDWGIASQRIPAEELSHLSCPCPQPSPWWWPWRCTPASGGTSLHTPRSRPSSPGPSTWAGSQLSSCSVQVP" variation 120 /gene="NKG7" /gene_synonym="GIG1; GMP-17; p15-TIA-1" /replace="a" /replace="c" /db_xref="dbSNP:2514190625" variation 121 /gene="NKG7" /gene_synonym="GIG1; GMP-17; p15-TIA-1" /replace="g" /replace="t" /db_xref="dbSNP:767254406" variation...
AA_position 91
Synonym: GIG1; GMP-17; p15-TIA-1
NM_001363693.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens kinesin family member 12 (KIF12), transcript variant 1, mRNA. (2012 bp)
WNKTRGFYVEQLRVVEFGSLEALMELLQTGLSRRRNSAHTLNQASSRSHALLTLYISRQTAQQMPSVDPGEPPVGGKLCFVDLAGSEKVAATGSRGELMLEANSINRSLLALGHCISLLLDPQRKQSHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRVTTRPQAPKSPVAKQPQRLETEMLQLQEENRRLQFQLDQMDCKASGLSGARVAWAQRNLYGMLQEFMLENERLRKEKSQLQNSRDLAQNEQRILAQQVHALERRLLSACYHHQQGPGLTPPCPCLMAPAPPCHALPPLYSCPCCHICPLCRVPLAHWACLPGEHHLPQVLDPEASGGRPPSARPPPWAPPCSPGSAKCPRERSHSDWTQTRVLAEMLTEEEVVPSAPPLPVRPPKTSPGLRGGAGVPNLAQRLEALRDQIGSSLRRGRSQPPCSEGARSPGQVLPPH" misc_feature 1249 /gene="KIF12" /gene_synonym="PFIC8" /note="Uncharacterized conserved protein YhaN, contains AAA domain...
AA_position 348
Synonym: PFIC8
NM_138424.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens SLAM family member 8 (SLAMF8), transcript variant 2, mRNA. (2789 bp)
protein_id="NP_001317670.1" /db_xref="CCDS:CCDS81387.1" /db_xref="GeneID:56833" /db_xref="HGNC:HGNC:21391" /db_xref="MIM:606620" /translation="MVMRPLWSLLLWEDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP" variation 27 /gene="SLAMF8" /gene_synonym="BLAME; CD353; SBBI42" /replace="a" /replace="t" /db_xref="dbSNP:149191301" variation 30 /gene="SLAMF8" /gene_synonym="BLAME; CD353; SBBI42" /replace="a" /replace="g" /db_xref="dbSNP:1663654632" variation 31 /gene="SLAMF8" /gene_synonym...
AA_position 148
Synonym: BLAME; CD353; SBBI42
NM_001330741.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens nuclear pore complex interacting protein family member A3 (NPIPA3), transcript variant 1, mRNA. (1747 bp)
isoform 1 is encoded by transcript variant 1" /codon_start=1 /product="nuclear pore complex-interacting protein family member A3 isoform 1" /protein_id="NP_001382416.1" /db_xref="CCDS:CCDS92114.1" /db_xref="GeneID:642778" /db_xref="HGNC:HGNC:41978" /translation="MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPPECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPP...
AA_position 33
NM_001395487.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens nuclear pore complex interacting protein family member A2 (NPIPA2), transcript variant 1, mRNA. (1509 bp)
complex-interacting protein family member A1" /codon_start=1 /product="nuclear pore complex-interacting protein family member A2 isoform 1" /protein_id="NP_001382414.1" /db_xref="CCDS:CCDS92115.1" /db_xref="GeneID:642799" /db_xref="HGNC:HGNC:41979" /translation="MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPPECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPP...
AA_position 33
Synonym: NPIP; NPIPA1
NM_001395485.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens nuclear pore complex interacting protein family member A2 (NPIPA2), transcript variant 3, mRNA. (1877 bp)
complex-interacting protein family member A1" /codon_start=1 /product="nuclear pore complex-interacting protein family member A2 isoform 1" /protein_id="NP_001382415.1" /db_xref="CCDS:CCDS92115.1" /db_xref="GeneID:642799" /db_xref="HGNC:HGNC:41979" /translation="MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPPECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPP...
AA_position 33
Synonym: NPIP; NPIPA1
NM_001395486.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chromosome 19 open reading frame 84 (C19orf84), transcript variant 1, mRNA. (1335 bp)
protein C19orf84" /codon_start=1 /product="piRNA-mediated silencing protein C19orf84" /protein_id="NP_001180552.1" /db_xref="CCDS:CCDS58676.1" /db_xref="GeneID:147646" /db_xref="HGNC:HGNC:27112" /translation="MEQPKDGAGPEGNNLSLPSSGTEPWPPAPLPAPPPLLLNSTDPTHLGLPESVASVTVPIRLDTLSCLLHSALLGAYTFQQALPSCPCCSQAGHSQPGAVRRPPRGRGGWEVRHRPGWGRGLHRRGLGRAEQPERGRAGGPGAGPRTPPMTLPSPPTLPAQDGKKEARGPEPPLETPLAAEDWETEY" misc_feature 80..637 /gene="C19orf84" /note="Family of unknown function (DUF5549); Region: DUF5549; pfam17703" /db_xref="CDD:407588" misc_feature 80..205 /gene="C19orf84" /note="propagated from UniProtKB...
AA_position 85
NM_001193623.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens spermatogenesis associated 3 (SPATA3), mRNA. (1629 bp)
spermatogenesis-associated protein 3" /protein_id="NP_620712.2" /db_xref="CCDS:CCDS2481.1" /db_xref="GeneID:130560" /db_xref="HGNC:HGNC:17884" /db_xref="MIM:619857" /translation="MKKVKKKRSEARRHRDSTSQHASSNSTSQQPSPESTPQQPSPESTPQQPSPESTPQHSSLETTSRQPAFQALPAPEIRRSSCCLLSPDANVKAAPQSRKAGPLIRAGPHSCSCATCPCSSACWRRLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRKSSRKPSSHRNACPPSPRNCGCGSGGSRSCLLHH" misc_feature 114..686 /gene="SPATA3" /gene_synonym="TSARG1" /note="Spermatogenesis-associated protein 3 family; Region: SPATA3; pfam15662" /db_xref="CDD:434837" misc_feature 114..308 /gene="SPATA3" /gene_synonym="TSARG1" /note...
AA_position 116
Synonym: TSARG1
NM_139073.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens immunoglobulin like domain containing receptor 1 (ILDR1), transcript variant 2, mRNA. (2723 bp)
CCDS3008.1" /db_xref="GeneID:286676" /db_xref="HGNC:HGNC:28741" /db_xref="MIM:609739" /translation="MAWPKLPAPWLLLCTWLPAGCLSLLVTVQHTERYVTLFASIILKCDYTTSAQLQDVVVTWRFKSFCKDPIFDYYSASYQAALSLGQDPSNDCNDNQREVRIVAQRRGQNEPVLGVDYRQRKITIQNRADLVINEVMWWDHGVYYCTIEAPGDTSGDPDKEVKLIVLHWLTVIFIILGAIGVCWCQCCPQYCCCYIRCPCCPAHCCCPEEDLSLPSSLPQMPMTQTTNQPPIANGVLEYLEKELRNLNLAQPLPPDLKGRFGHPCSMLSSLGSEVVERRIIHLPPLIRDLSSSRRTSDSLHQQWLTPIPSRPWDLREGRSHHHYPDFHQELQDRGPKSWALERRELDPSWSGRHRSSRLNGSPIHWSDRDSLSDVPSSSEARWRPSHPPFRSRCQERPRRPSPRESTQRHGRRRRHRSYSPPLPSGLSSWSSEEDKERQPQSWRAHRRGSHSPHWPEEKPPSYRSLDITPGKNSRKKGSVERRSEKDSSHSGRSVVI"...
AA_position 203
Synonym: DFNB42; ILDR1alpha; ILDR1alpha'; ILDR1beta
NM_175924.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 7, mRNA. (2107 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309835.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 266..490 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322906.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 9, mRNA. (2231 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309837.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 390..614 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322908.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 11, mRNA. (2205 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309839.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 364..588 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322910.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 2, mRNA. (2053 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_570824.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 212..436 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_130811.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 6, mRNA. (2113 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309834.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 272..496 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322905.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 5, mRNA. (2150 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309833.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 309..533 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322904.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 8, mRNA. (2308 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309836.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 467..691 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322907.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 3, mRNA. (2163 bp)
product="synaptosomal-associated protein 25 isoform SNAP25A" /protein_id="NP_001309831.1" /db_xref="CCDS:CCDS13109.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 349..567 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="N-terminal SNARE motif of SNAP25; Region: SNARE_SNAP25N;...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322902.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 4, mRNA. (2180 bp)
product="synaptosomal-associated protein 25 isoform SNAP25B" /protein_id="NP_001309832.1" /db_xref="CCDS:CCDS13110.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 339..563 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="propagated from UniProtKB/Swiss-Prot (P60880.1); Region:...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_001322903.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens synaptosome associated protein 25 (SNAP25), transcript variant 1, mRNA. (2053 bp)
product="synaptosomal-associated protein 25 isoform SNAP25A" /protein_id="NP_003072.2" /db_xref="CCDS:CCDS13109.1" /db_xref="GeneID:6616" /db_xref="HGNC:HGNC:11132" /db_xref="MIM:600322" /translation="MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG" misc_feature 239..457 /gene="SNAP25" /gene_synonym="bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP" /note="N-terminal SNARE motif of SNAP25; Region: SNARE_SNAP25N;...
AA_position 90
Synonym: bA416N4.2; CMS18; dJ1068F16.2; RIC-4; RIC4; SEC9; SNAP; SNAP-25; SUP
NM_003081.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : https://ggrna.dbcls.jp/hs/aa%3aCPC
lang : en | div : | spe : hs | query_string : aa:CPC | format : html | download : 

0.000 | 0.000 | search_start;
1.089 | 1.088 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:CPC)?source=Homo sapiens (human)?to=0&format=json
1.579 | 0.491 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:CPC)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
1.585 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]