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2024-04-24 05:21:19, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Gallus gallus claudin 3 (CLDN3), mRNA. (1175 bp)
gene="CLDN3" /gene_synonym="claudin-3" /inference="alignment:Splign:2.1.0" CDS 87..731 /gene="CLDN3" /gene_synonym="claudin-3" /codon_start=1 /product="claudin-3" /protein_id="NP_989533.1" /db_xref="CGNC:49012" /db_xref="GeneID:374029" /translation="MSMGLEIGGVALSVLGWLCSIICCALPMWRVTAFIGNNIVTAQIIWEGLWMNCVVQSTGQMQCKVYDSMLALPQDLQAARALLVVAIVLAVLGLMVAIVGAQCTRCVEDETTKAKITIVSGVIFLLSGIMTLIPVSWSANTIIRDFYNPLVIDAQKRELGTSLYVGWAASALLLFGGALLCCSCPPKDERYAPSKVAYSAPRSAVTSYDKRNYV" misc_feature 93..593 /gene="CLDN3" /gene_synonym="claudin-3" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /...
Synonym: claudin-3
NM_204202.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin 10 (CLDN10), transcript variant 2, mRNA. (843 bp)
variant 2" /codon_start=1 /product="claudin-10 isoform 2 precursor" /protein_id="NP_001264697.1" /db_xref="CGNC:13756" /db_xref="GeneID:418790" /translation="MASTSAEIVAFLLTISGWVLVSSTLPTDYWKVSSIDGTVITTATFWANLWKTCVTDSTGVSNCKDFPSMLALDARIACLAGLIFILCGLCSMTGCSLYAHRITSEFFDPSFVAQKYELGAALFIGWAGASLCIIGGSIFCFSIAENSKSPRRAYAYNGAASVMSSRTKIHNSVPDKTSPKHFDKNAYV" sig_peptide 11..79 /gene="CLDN10" /gene_synonym="claudin-10" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 29..427 /gene="CLDN10" /gene_synonym="claudin-10" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin;...
Synonym: claudin-10
NM_001277768.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin 10 (CLDN10), transcript variant 3, mRNA. (741 bp)
gene_synonym="claudin-10" /inference="alignment:Splign:2.1.0" CDS 123..659 /gene="CLDN10" /gene_synonym="claudin-10" /note="isoform 3 is encoded by transcript variant 3" /codon_start=1 /product="claudin-10 isoform 3" /protein_id="NP_001264698.1" /db_xref="CGNC:13756" /db_xref="GeneID:418790" /translation="MNCAGNALGAFHCRPHLTIFKVEGYIQACRGLMISAVCLGFFGSVFGLVGMKCTKIGGSDQNKARIACLAGLIFILCGLCSMTGCSLYAHRITSEFFDPSFVAQKYELGAALFIGWAGASLCIIGGSIFCFSIAENSKSPRRAYAYNGAASVMSSRTKIHNSVPDKTSPKHFDKNAYV" misc_feature <180..509 /gene="CLDN10" /gene_synonym="claudin-10" /note="PMP-22/EMP/MP20/Claudin family; Region:...
Synonym: claudin-10
NM_001277769.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin 10 (CLDN10), transcript variant 1, mRNA. (971 bp)
product="claudin-10 isoform 1 precursor" /protein_id="NP_001264696.1" /db_xref="CGNC:13756" /db_xref="GeneID:418790" /translation="MASTSAEIVAFLLTISGWVLVSSTLPTDYWKVSSIDGTVITTATFWANLWKTCVTDSTGVSNCKDFPSMLALDGYIQACRGLMISAVCLGFFGSVFGLVGMKCTKIGGSDQNKARIACLAGLIFILCGLCSMTGCSLYAHRITSEFFDPSFVAQKYELGAALFIGWAGASLCIIGGSIFCFSIAENSKSPRRAYAYNGAASVMSSRTKIHNSVPDKTSPKHFDKNAYV" sig_peptide 24..92 /gene="CLDN10" /gene_synonym="claudin-10" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 42..560 /gene="CLDN10" /gene_synonym="claudin-10" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_...
Synonym: claudin-10
NM_001277767.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin 5 (CLDN5), mRNA. (1752 bp)
gene="CLDN5" /note="claudin 5" /db_xref="CGNC:49011" /db_xref="GeneID:374028" exon 1..1752 /gene="CLDN5" /inference="alignment:Splign:2.1.0" CDS 90..740 /gene="CLDN5" /codon_start=1 /product="claudin-5" /protein_id="NP_989532.1" /db_xref="CGNC:49011" /db_xref="GeneID:374028" /translation="MASAAVEILGLGLGILGWVGVILACGLPMWQVSAFIDVNIVVAQTIWEGLWMNCVVQSTGQMQCKVYDSILALRPEVQAGRALTVIVALLGLVALMVTVVGAQCTNCIRPGKMKSRIVIAGGTIYILCGVLVLVPLCWFANIVISDFYDPSVPPSQKREIGAALYIGWAATALLLFGGCLICCCSCLQRDETSFPVKYSAPRRPTSSGEYDKKNYV" misc_feature 177..629 /gene="CLDN5" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_...
NM_204201.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin 1 (CLDN1), mRNA. (2578 bp)
note="claudin 1" /db_xref="CGNC:66478" /db_xref="GeneID:424910" exon 1..301 /gene="CLDN1" /inference="alignment:Splign:2.1.0" CDS 79..714 /gene="CLDN1" /note="tight junction protein" /codon_start=1 /product="claudin-1" /protein_id="NP_001013629.1" /db_xref="CGNC:66478" /db_xref="GeneID:424910" /translation="MASGGLQLLGFVLAFLGWMGIIISTAMPQWKMASYAGDNIVTAQALYEGLWMSCAMQSTGQIQCKVYDSLLKLEGSLQATRALMVAAILLGLVGVFVAVTGMKCMKCMEDDQVKKMRMAVFGGVIFIIAGLSALVATSWYGNRVARAFYDPFTPVNTRFEFGSALFIGWAAASLALLGGAFLCCSCPRSETSYPPSRGYPKNAPSTGKDYV" misc_feature 91..624 /gene="CLDN1" /note="PMP-22/EMP/MP20/Claudin family;...
NM_001013611.2 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin 2 (CLDN2), mRNA. (1509 bp)
CLDN2" /note="upstream in-frame stop codon" CDS 340..1023 /gene="CLDN2" /codon_start=1 /product="claudin-2" /protein_id="NP_001264551.1" /db_xref="CGNC:5527" /db_xref="GeneID:422292" /translation="MVSMGLQLVGYIVAFLGYIGTLTTTLLPNWKISSYIGSSIVTAVSFTKGLWMECATYSTGITQCDIYSSLLNLPPDIQAAQALMVSSCAVSSLACLIAVVGMRCTVFNQGSPAKDRVAVAGGVVFILGGLLCFIPLVWNIHVVLRDFHNPLLPDSTKFEMGEALYLGIISSLLTLIGGFILCASCPPRDPSGPYSPRLLASRSPQPSIKQMQKPKSEFSSYNLTGYV" misc_feature 349..882 /gene="CLDN2" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN // REFERENCE 1 (bases 1 to 1509)...
NM_001277622.1 - Gallus gallus (chicken) - NCBI - UCSC
Gallus gallus claudin domain containing 1 (CLDND1), mRNA. (2086 bp)
Splign:2.1.0" CDS 352..1107 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1" /protein_id="NP_001012838.1" /db_xref="CGNC:66314" /db_xref="GeneID:418357" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 403..1047 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" exon 641..748 /gene="...
NM_001012820.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 10 (CLDN10), transcript variant X1, mRNA. (843 bp)
CGNC:13756" /db_xref="GeneID:418790" CDS 16..582 /gene="CLDN10" /gene_synonym="claudin-10" /codon_start=1 /product="claudin-10 isoform X1" /protein_id="XP_046764109.1" /db_xref="GeneID:418790" /db_xref="CGNC:13756" /translation="MLISLELWQNEALLLELDFGQRFLKYVCNAAERGYIQACRGLMISAVCLGFFGSVFGLVGMKCTKIGGSDQNKARIACLAGLIFILCGLCSMTGCSLYAHRITSEFFDPSFVAQKYELGAALFIGWAGASLCIIGGSIFCFSIAENSKSPRRAYAYNGAASVMSSRTKIHNSVPDKTSPKHFDKNAYV" misc_feature <100..432 /gene="CLDN10" /gene_synonym="claudin-10" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 843 /gene="...
Synonym: claudin-10
XM_046908153.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 10 (CLDN10), transcript variant X1, mRNA. (843 bp)
CGNC:13756" /db_xref="GeneID:418790" CDS 16..582 /gene="CLDN10" /gene_synonym="claudin-10" /codon_start=1 /product="claudin-10 isoform X1" /protein_id="XP_046797288.1" /db_xref="GeneID:418790" /db_xref="CGNC:13756" /translation="MLISLELWQNEALLLELDFGQRFLKYVCNAADRGYIQACRGLMISAVCLGFFGSVFGLVGMKCTKIGGSDQNKARIACLAGLIFILCGLCSMTGCSLYAHRITSEFFDPSFVAQKYELGAALFIGWAGASLCIIGGSIFCFSIAENSKSPRRAYAYNGAASVMSSRTKIHNSVPDKTSPKHFDKNAYV" misc_feature <100..432 /gene="CLDN10" /gene_synonym="claudin-10" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 843 /gene="...
Synonym: claudin-10
XM_046941332.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X5, mRNA. (1792 bp)
cap analysis [ECO:0007248]" /note="transcription start site" CDS 355..813 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X2" /protein_id="XP_046763734.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature <469..753 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1792 /gene="CLDND1" /experiment="COORDINATES: polyA...
XM_046907778.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X5, mRNA. (1792 bp)
cap analysis [ECO:0007248]" /note="transcription start site" CDS 355..813 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X2" /protein_id="XP_015151478.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature <469..753 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1792 /gene="CLDND1" /experiment="COORDINATES: polyA...
XM_015295992.4 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 15 (CLDN15), transcript variant X1, mRNA. (2731 bp)
of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:424768" CDS 27..503 /gene="CLDN15" /codon_start=1 /product="claudin-15 isoform X1" /protein_id="XP_046754675.1" /db_xref="GeneID:424768" /translation="MTIYSRAHVQACRTLMIISILLGFKAAVISLLGLKCTNVGLSDEDEKVKVAVTGGFLFILGGLCSMVAVSWYAAMITAPFFNPLYTGTKYKLGDALYLGWAGSVLCMLGGIFLTCPCKGKEKQEYSASKYRYSAGQASGQQQIYTEDAETVSSPKEYI" misc_feature <54..365 /gene="CLDN15" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 2731 /gene="CLDN15" /experiment="COORDINATES: polyA evidence [ECO:0006239]"...
XM_046898719.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 14 (CLDN14), mRNA. (1571 bp)
xref="CGNC:11984" /db_xref="GeneID:427982" CDS 124..831 /gene="CLDN14" /codon_start=1 /product="claudin-14" /protein_id="XP_040515559.1" /db_xref="GeneID:427982" /db_xref="CGNC:11984" /translation="MASTAIQLLGFSLGLLGLIGTLIATILPHWWRTAHVGTNIITAVAYMKGLWMECVWHSTGVYQCQVHRSQLALPPDLQAARAMMVISCILSVLACVIAVIGMKCTRCAKGTSAKASIAVSGGIVFILAGLTCLVPVSWTTNDVVTDFYNPLLPQGMKYEIGQALYLGFVSASLTILGGALLCTSGQCGTDQGPRQPRPCSTRTAPSCRPPTAYKGNHASSLTSASHSGYRLNDYV" misc_feature 190..666 /gene="CLDN14" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN //...
XM_040659625.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 14 (CLDN14), mRNA. (1568 bp)
xref="CGNC:11984" /db_xref="GeneID:427982" CDS 124..831 /gene="CLDN14" /codon_start=1 /product="claudin-14" /protein_id="XP_015155717.1" /db_xref="GeneID:427982" /db_xref="CGNC:11984" /translation="MASTAVQLLGFSLGLLGLIGTLIATILPHWWRTAHVGTNIITAVAYMKGLWMECVWHSTGVYQCQVHRSQLALPPDLQAARAMMVISCILSVLACVIAVIGMKCTRCAKGTSAKASIAVSGGIVFILAGLTCLVPVSWTTNDVVTDFYNPLLPQGMKYEIGQALYLGFVSASLTILGGALLCTSGQCGTDQGPRQPRPCSTRTAPSCRPPTAYKGNHASSLTSASHSGYRLNDYV" misc_feature 190..666 /gene="CLDN14" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN //...
XM_015300231.4 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X1, mRNA. (2083 bp)
start site" CDS 349..1104 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_046763730.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 400..1044 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_046907774.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X1, mRNA. (2083 bp)
start site" CDS 349..1104 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_015151458.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 400..1044 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_015295972.4 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 22 (CLDN22), transcript variant X1, mRNA. (2714 bp)
db_xref="CGNC:64221" /db_xref="GeneID:100858888" CDS 1..654 /gene="CLDN22" /codon_start=1 /product="claudin-22-like" /protein_id="XP_040555584.1" /db_xref="GeneID:100858888" /db_xref="CGNC:64221" /translation="MALVYRPVAQLSGMLLSLLGWVLSCLTTYLPQWKNLNLELNELEIWTMGLWQACVVQEEGGMQCKDFDSFLALPPELRISRILMFFSNGLGLLGLLFSGFGLDCLKIGERQQDHKKRLLLFGGMLFWMSGITAIVPVSWVAHSTVQEFWDENIPDIVPRWDLGEALFVGWLAGFCLILGGSLLNCTTCSTELHPSSVHYAVTEQQDQCQHLETETRP" misc_feature <145..549 /gene="CLDN22" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 2714 /gene="CLDN22" /...
XM_040699650.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X4, mRNA. (2121 bp)
start site" CDS 387..1142 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_046763733.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 438..1082 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_046907777.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X3, mRNA. (2124 bp)
start site" CDS 390..1145 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_046763732.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 441..1085 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_046907776.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X2, mRNA. (2306 bp)
start site" CDS 572..1327 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_046763731.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 623..1267 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_046907775.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 22 (CLDN22), transcript variant X2, mRNA. (3815 bp)
db_xref="CGNC:64221" /db_xref="GeneID:100858888" CDS 1..654 /gene="CLDN22" /codon_start=1 /product="claudin-22-like" /protein_id="XP_040527300.1" /db_xref="GeneID:100858888" /db_xref="CGNC:64221" /translation="MALVYRPVAQLSGMLLSLLGWVLSCLTTYLPQWKNLNLELNELEIWTMGLWQACVVQEEGGMQCKDFDSFLALPPELRISRILMFFSNGLGLLGLLFSGFGLDCLKIGERQQDHKKRLLLFGGMLFWMSGITAIVPVSWVAHSTVQEFWDENIPDIVPRWDLGEALFVGWLAGFCLILGGFLLNCTICSTELHPSSVHYAVTEQQDQCQHLETETRP" misc_feature <145..549 /gene="CLDN22" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 3815 /gene="CLDN22" /...
XM_040671366.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 20 (CLDN20), mRNA. (4011 bp)
" /note="transcription start site" CDS 53..712 /gene="CLDN20" /codon_start=1 /product="claudin-20" /protein_id="XP_040523208.2" /db_xref="GeneID:769340" /db_xref="CGNC:66623" /translation="MASAGLQFFAFMLALFGVFGDIAATLLPNWKVNADVGSNIITAITQMQGLWMDCTWYSTGMFSCTLKYSVLSLPVYIQTARTTMVMSCILSAFGICITTVGMKCTKLGGDPDSKSHTCFAGGVCFILAGIFGLVPTSWYTREIISNFLDQTIPESGKHEPGGAVYIGFISAGFLLVAGVIFCTSCFKKQQGAWIYPPKQQHLPSTMQESSAGYNLKDYV" misc_feature 65..595 /gene="CLDN20" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN //...
XM_040667274.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 20 (CLDN20), mRNA. (3986 bp)
" /note="transcription start site" CDS 53..712 /gene="CLDN20" /codon_start=1 /product="claudin-20" /protein_id="XP_004935700.2" /db_xref="GeneID:769340" /db_xref="CGNC:66623" /translation="MASAGLQFFAFMLALFGVFGDIAATLLPNWKVNADVGSNIITAITQMQGLWMDCTWYSTGMFSCTLKYSVLSLPVYIQTARTTMVMSCILSAFGICITTVGMKCTKLGGDPDSKSHTCFAGGVCFILAGIFGLVPTSWYTREIISNFLDQTIPESGKHEPGGAVYIGFISAGFLLVAGVIFCTSCFKKQQGAWIYPPKQQHLPSTMQESSAGYNLKDYV" misc_feature 65..595 /gene="CLDN20" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN //...
XM_004935643.5 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-8 (LOC427973), transcript variant X2, mRNA. (6673 bp)
for all annotated introns" /db_xref="GeneID:427973" CDS 5486..6154 /gene="LOC427973" /codon_start=1 /product="claudin-8" /protein_id="XP_040514192.1" /db_xref="GeneID:427973" /translation="MACCALQIIGLIFGGVGMVGTLAATAMPQWRVSAHIDSNIVVFETIWEGLWMDCISQMGIRLQCKFYDSILALPPPLEAFRALMCIAVLLSIIAFLMAIVGVKYTHWTKEDPQGISIFMLAAGVAFLLTGILVLIPVSWTGGSIVHDFYDAKVPTPLKRELGAALYVGWVSAALLIIAGAMYCSFWCWAGTTPKSRDPSLPPHRLHRPNTAGGPLLSVQAYV" misc_feature 5498..6031 /gene="LOC427973" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 6673 /gene="LOC427973" /experiment="...
XM_040658258.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-8 (LOC427973), transcript variant X2, mRNA. (6668 bp)
for all annotated introns" /db_xref="GeneID:427973" CDS 5481..6149 /gene="LOC427973" /codon_start=1 /product="claudin-8" /protein_id="XP_015155129.2" /db_xref="GeneID:427973" /translation="MACCALQIIGLIFGGVGMVGTLAATAMPQWRVSAHIDSNIVVFETIWEGLWMDCISQMGIRLQCKFYDSILALPPPLEAFRALMCIAVLLSIIAFLMAIVGVKYTHWTKEDPQGISIFMLAAGVAFLLTGILVLIPVSWTGGSIVHDFYDAKVPTPLKRELGAALYVGWVSAALLIIAGAMYCSFWCWAGTTPKSRDPSLPPHRLHRPNTAGGPLLSMQAYV" misc_feature 5493..6026 /gene="LOC427973" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 6668 /gene="LOC427973" /experiment="...
XM_015299643.4 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-8 (LOC427973), transcript variant X1, mRNA. (7344 bp)
for all annotated introns" /db_xref="GeneID:427973" CDS 5485..6153 /gene="LOC427973" /codon_start=1 /product="claudin-8" /protein_id="XP_040514191.1" /db_xref="GeneID:427973" /translation="MACCALQIIGLIFGGVGMVGTLAATAMPQWRVSAHIDSNIVVFETIWEGLWMDCISQMGIRLQCKFYDSILALPPPLEAFRALMCIAVLLSIIAFLMAIVGVKYTHWTKEDPQGISIFMLAAGVAFLLTGILVLIPVSWTGGSIVHDFYDAKVPTPLKRELGAALYVGWVSAALLIIAGAMYCSFWCWAGTTPKSRDPSLPPHRLHRPNTAGGPLLSVQAYV" misc_feature 5497..6030 /gene="LOC427973" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 7344 /gene="LOC427973" /experiment="...
XM_040658257.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-8 (LOC427973), transcript variant X1, mRNA. (7329 bp)
for all annotated introns" /db_xref="GeneID:427973" CDS 5480..6148 /gene="LOC427973" /codon_start=1 /product="claudin-8" /protein_id="XP_015155123.2" /db_xref="GeneID:427973" /translation="MACCALQIIGLIFGGVGMVGTLAATAMPQWRVSAHIDSNIVVFETIWEGLWMDCISQMGIRLQCKFYDSILALPPPLEAFRALMCIAVLLSIIAFLMAIVGVKYTHWTKEDPQGISIFMLAAGVAFLLTGILVLIPVSWTGGSIVHDFYDAKVPTPLKRELGAALYVGWVSAALLIIAGAMYCSFWCWAGTTPKSRDPSLPPHRLHRPNTAGGPLLSMQAYV" misc_feature 5492..6025 /gene="LOC427973" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 7329 /gene="LOC427973" /experiment="...
XM_015299637.4 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-16-like (LOC769267), transcript variant X1, mRNA. (4942 bp)
note="transcription start site" CDS 4107..4799 /gene="LOC769267" /codon_start=1 /product="claudin-16-like" /protein_id="XP_046759260.1" /db_xref="GeneID:769267" /db_xref="CGNC:55121" /translation="MSALLQMTAFGLTLLSALFLLLATCTDCWMVNADDSLEVSHKCRGLWRECVTNTQDGVRTCDQYDSILADHPVKIVVTRTLLITADLLVGLALATLLLGLDCTKFLKEEPHVKLKMCYGAGIILGIGSILGLVGSVWYAVDVYVERAMLVSHNLFLGVHYDFGWSCWLGMAGSTGCFVASVLLTCCLHAHTGQSVLSRAAPSHIKSCRDIPAVDNSEGAVASCRLQPNEG" misc_feature <4464..4655 /gene="LOC769267" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN //...
XM_046903304.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X4, mRNA. (2121 bp)
start site" CDS 387..1142 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_040553884.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 438..1082 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_040697950.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X3, mRNA. (2124 bp)
start site" CDS 390..1145 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_040553882.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 441..1085 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_040697948.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin domain containing 1 (CLDND1), transcript variant X2, mRNA. (2306 bp)
start site" CDS 572..1327 /gene="CLDND1" /codon_start=1 /product="claudin domain-containing protein 1 isoform X1" /protein_id="XP_015151469.1" /db_xref="GeneID:418357" /db_xref="CGNC:66314" /translation="MMDNRFATALVIACVLSLISTIYMAASLGTDFWYEYHTLSPAENITEAGRSIWEEFVSEEADEKTYTDALFRCNGTVGLWRRCITVPKNSHWYSPPETDMTTNCISFSLSDQFMEKYVEPGNHNSGTDLNRTYLWRLQFLLPFVSLGLMCFGALIGLCACACRSLYPAIATGVLHFLAGLCTLGLVGCYVAGIELLHKKLPLPGDVRGEFGWSFCLACVSAPLQFMAAALFIWAARTNRKEFTLLKAYRVA" misc_feature 623..1267 /gene="CLDND1" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site...
XM_015295983.4 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 8 (CLDN8), transcript variant X2, mRNA. (10330 bp)
" /note="transcription start site" CDS 3931..4605 /gene="CLDN8" /codon_start=1 /product="claudin-8" /protein_id="XP_046756748.1" /db_xref="GeneID:427974" /db_xref="CGNC:11818" /translation="MISGALQIAGLLLGGLGMIGTFAVTGMPQWRVSAFIENNIIVFETIWEGLWMHCIRQANIRMQCKVYDSVLALSPDLQASRGLMCAGSVLSFLAFLVATVGMKCMRCRQSGWPTKGYILVAAGLLFILSGTTALIPICWVANTIIRDFYNPVVNVAQKRELGEALYLGWVAAFCLLAAGAIFCCFCRCCEKTRSYNYSMPPQHLPLNQHLHGATESAYSKSQYV" misc_feature 3994..4476 /gene="CLDN8" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 10330 /gene="CLDN8" /...
XM_046900792.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 4 (CLDN4), mRNA. (1368 bp)
analysis [ECO:0007248]" /note="transcription start site" CDS 22..651 /gene="CLDN4" /codon_start=1 /product="claudin-4" /protein_id="XP_040543526.1" /db_xref="GeneID:395144" /db_xref="CGNC:49188" /translation="MASMGLQVLGIALSVIGWLASVLCCALPMWRETAFVGNNIVVAQIIWEGLWMNCVVQSTGQMQCRVYDSMLALPQDLQAARALLVVAIVLAVLGTLLAIAGGKCTTCVEDETAKAKVMILSGITFIVAGVLILIPICWSANAIIRDFYDPLVADSQKRELGSSLYVGWAASALLLLGGALLCCSCPPRGEKPYSAKYSAARSLPASNYV" misc_feature 31..525 /gene="CLDN4" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1368 /gene="CLDN4" /experiment="...
XM_040687592.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 4 (CLDN4), mRNA. (1368 bp)
analysis [ECO:0007248]" /note="transcription start site" CDS 22..651 /gene="CLDN4" /codon_start=1 /product="claudin-4" /protein_id="XP_003642430.3" /db_xref="GeneID:395144" /db_xref="CGNC:49188" /translation="MASMGLQVLGIALSVIGWLASVLCCALPMWRETAFVGNNIVVAQIIWEGLWMNCVVQSTGQMQCRVYDSMLALPQDLQAARALLVVAIVLAVLGTLLAIAGGKCTTCVEDETAKAKVMILSGITFIVAGVLILIPICWSANAIIRDFYDPLVADSQKRELGSSLYVGWAASALLLLGGALLCCSCPPRGEKPYSAKYSAARSLPASNYV" misc_feature 31..525 /gene="CLDN4" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1368 /gene="CLDN4" /experiment="...
XM_003642382.6 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-22-like (LOC100858925), mRNA. (4708 bp)
note="transcription start site" CDS 3854..4510 /gene="LOC100858925" /codon_start=1 /product="claudin-22-like" /protein_id="XP_046796738.1" /db_xref="GeneID:100858925" /db_xref="CGNC:64190" /translation="MDLVHRHRLQLLGLLLSVIGWILTGTCNYLPDWKNLGLDLNELELWTMGLWQTCVVQDVGGTQCKDFDSFLALPIEFRISRILVSTSNGLGLLSLVISSLGLDCLKTENTEQKLKKQLLLLGGILMWISGVLVLVPVSWVAYTIIQEFWDEVIPEIVPRWEIGDALFSGWFGGFFIILGGSLLLLTMFFSSDHQLPEQYTMADMQDNRQQVEVGNRRL" misc_feature <3998..4378 /gene="LOC100858925" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 4708 /gene="LOC100858925" /...
XM_046940782.1 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 11 (CLDN11), mRNA. (1608 bp)
analysis [ECO:0007248]" /note="transcription start site" CDS 140..763 /gene="CLDN11" /codon_start=1 /product="claudin-11" /protein_id="XP_422797.1" /db_xref="GeneID:424990" /db_xref="CGNC:7112" /translation="MVATCLHLAGFVCSFIGWIGVVVATATNDWVVTCGYTITTCRKMDELGSKGLWADCVMATGLYHCKPLVDILILPGYVQACRALMIAASVLGLPAIFLLITVLPCIRMGHEPGAAKYRRSQLGGILIILLAMCGVVATIWFPVCAHRETTIMSFGYSLYTGWIGSALCLFGGCVIVCCSGDAQTFGENRFYYASGSSSPTHAKSAHV" misc_feature 155..655 /gene="CLDN11" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1608 /gene="CLDN11" /experiment="...
XM_422797.8 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 18 (CLDN18), mRNA. (1139 bp)
note="transcription start site" CDS 82..861 /gene="CLDN18" /codon_start=1 /product="claudin-18" /protein_id="XP_426691.4" /db_xref="GeneID:429135" /db_xref="CGNC:4972" /translation="MSTTLCQVMGFLVSSLGVVGCIMSTAMDMWSTQDLYDNPVTAVFQYQGLWRSCVRQSSGFTECRPYFTILGLPAMFQAVRALMIVGIVLGILGLFVCIFAMKCIRIGTMEDSAKANMTLTSGIMFIIAGLCAITGVSVFANMLVTNFWMSTTNMYQGMQNVQNRYTFGSALFVGWVAGGLALVGGIMMCLACKGMVPEESRYKAVSYNASGRNISYRTGPYKAGSGYEPETKTRKGPGYEEAPRSEDAGRSYPSKYDYV" misc_feature 91..642 /gene="CLDN18" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1139 /gene="...
XM_426691.7 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 9 (CLDN9), transcript variant X1, mRNA. (939 bp)
analysis [ECO:0007248]" /note="transcription start site" CDS 68..712 /gene="CLDN9" /codon_start=1 /product="claudin-3" /protein_id="XP_040543525.1" /db_xref="GeneID:417474" /db_xref="CGNC:50521" /translation="MATMSMQLGGLVLAVLGWLGSILTCALPMWKVTAFIGYNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLDLTSDLQAARALVVTSIIMAFLGLLTAISGADCTRCMEDKSSKGRVSIVAGAIFVLAGIVLLIPVSWSANSIVTNFYNPMVPEALKRELGAALYIGWASSALQLLGGGILCCSGPPVERDHYPKSYRAVKGCGPMGYPMKDYV" misc_feature 77..610 /gene="CLDN9" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 939 /gene="CLDN9" /experiment="...
XM_040687591.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 9 (CLDN9), transcript variant X1, mRNA. (932 bp)
analysis [ECO:0007248]" /note="transcription start site" CDS 68..712 /gene="CLDN9" /codon_start=1 /product="claudin-3" /protein_id="XP_004946474.1" /db_xref="GeneID:417474" /db_xref="CGNC:50521" /translation="MATMSMQLGGLVLAVLGWLGSILTCALPMWKVTAFIGYNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLDLTSDLQAARALVVTSIIMAFLGLLTAISGADCTRCMEDKSSKGRVSIVAGAIFVLAGIVLLIPVSWSANSIVTNFYNPMVPEALKRELGAALYIGWASSALQLLGGGILCCSGPPVERDHYPKSYRAVKGCGPMGYPMKDYV" misc_feature 77..610 /gene="CLDN9" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 932 /gene="CLDN9" /experiment="...
XM_004946417.5 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin-22-like (LOC100858925), mRNA. (4707 bp)
note="transcription start site" CDS 3852..4508 /gene="LOC100858925" /codon_start=1 /product="claudin-22-like" /protein_id="XP_040527299.1" /db_xref="GeneID:100858925" /db_xref="CGNC:64190" /translation="MDLVHRHRLQLLGLLLSVIGWILTGTCNYLPDWKNLGLDLNELELWTMGLWQTCVVQDVGGTQCKDFDSFLALPIEFRISRILVSTSNGLGLLSLVISSLGLDCLKTENTEQKLKKQLLLLGGILMWISGVLVLVPVSWVAYTIIQEFWDEVIPEIVPRWEIGDALFSGWFGGFFIILGGSLLLLTMFFSSDHQLPEQYTMADMQDNRQQVEVGNRRL" misc_feature <3996..4376 /gene="LOC100858925" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 4707 /gene="LOC100858925" /...
XM_040671365.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 11 (CLDN11), mRNA. (1610 bp)
analysis [ECO:0007248]" /note="transcription start site" CDS 140..763 /gene="CLDN11" /codon_start=1 /product="claudin-11" /protein_id="XP_040535504.1" /db_xref="GeneID:424990" /db_xref="CGNC:7112" /translation="MVATCLHLAGFVCSFIGWIGVVVATATNDWVVTCGYTITTCRKMDELGSKGLWADCVMATGLYHCKPLVDILILPGYVQACRALMIAASVLGLPAIFLLITVLPCIRMGHEPGAAKYRRSQLGGILIILLAMCGVVATIWFPVCAHRETTIMSFGYSLYTGWIGSALCLFGGCVIVCCSGDAQTFGENRFYYASGSSSPTHAKSAHV" misc_feature 155..655 /gene="CLDN11" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1610 /gene="CLDN11" /experiment="...
XM_040679570.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 16 (CLDN16), mRNA. (3449 bp)
note="transcription start site" CDS 138..881 /gene="CLDN16" /codon_start=1 /product="claudin-16" /protein_id="XP_426702.1" /db_xref="GeneID:429147" /db_xref="CGNC:66577" /translation="MPLDVPTPAGMRFFLQYAGCFFAFFSTGFLIASTWTDCWMVNADDSLEVSTKCRGLWWECVTNVFDGIQTCDEYDSIFAEHPVKLVLTRAMMITADILAGFGFLFLVLGLDCVKFLPDEPLIKLRICLVSGVTLLIAGLPGITGSVWYAIDVYVERSSLVFHNIFLGIQYKFGWSCWLGMAGSLGCFLSGSLLTCCMYLFRETSSGRLHSAYSLRKGYSSAGTIVTNVHLPSSQTATAKMYAVDTRV" misc_feature 198..716 /gene="CLDN16" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 3449 /gene="CLDN16" /...
XM_426702.6 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 18 (CLDN18), mRNA. (1139 bp)
note="transcription start site" CDS 82..861 /gene="CLDN18" /codon_start=1 /product="claudin-18" /protein_id="XP_040535069.1" /db_xref="GeneID:429135" /db_xref="CGNC:4972" /translation="MSTTLCQVMGFLVSSLGVVGCIMSTAMDMWSTQDLYDNPVTAVFQYQGLWRSCVRQSSGFTECRPYFTILGLPAMFQAVRALMIVGIVLGILGLFVCIFAMKCIRIGTMEDSAKANMTLTSGIMFIIAGLCAITGVSVFANMLVTNFWMSTTNMYQGMQNVQNRYTFGSALFVGWVAGGLALVGGIMMCLACKGMVPEESRYKAVSYNASGRNISYRTGPYKAGSGYEPETKTRKGPGYEEAPRSEDAGRSYPSKYDYV" misc_feature 91..642 /gene="CLDN18" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 1139 /gene="...
XM_040679135.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 19 (CLDN19), transcript variant X1, mRNA. (993 bp)
" /note="transcription start site" CDS 19..687 /gene="CLDN19" /codon_start=1 /product="claudin-19" /protein_id="XP_040544654.1" /db_xref="GeneID:769245" /db_xref="CGNC:55102" /translation="MGGGARELAGYLAALGGWVAALAAAALPQWRQSSYAGDAIITAVGLHEGLWMSCAAQSTGQVQCRLHDSLLSLDVHIQTSRALMVISLLLGFFGIIVSVVGMKCTKVGEEDPITKSRIAVAGGVLFILCGLCTLAAVSLYATQVTYEFFSASTPINARYEFGSALFVGWGAASLTVLGGSLLCCSCPAKERQGQQYYRQSQPSTAREPHVKISSAIRGEQCL" misc_feature 37..564 /gene="CLDN19" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 993 /gene="CLDN19" /experiment="...
XM_040688720.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 19 (CLDN19), transcript variant X1, mRNA. (991 bp)
" /note="transcription start site" CDS 19..687 /gene="CLDN19" /codon_start=1 /product="claudin-19" /protein_id="XP_003642589.2" /db_xref="GeneID:769245" /db_xref="CGNC:55102" /translation="MGGGARELAGYLAALGGWVAALAAAALPQWRQSSYAGDAIITAVGLHEGLWMSCAAQSTGQVQCRLHDSLLSLDVHIQTSRALMVISLLLGFFGIIVSVVGMKCTKVGEEDPITKSRIAVAGGVLFILCGLCTLAAVSLYATQVTYEFFSASTPINARYEFGSALFVGWGAASLTVLGGSLLCCSCPAKERQGQQYYRQSQPSTAREPHVKISSAIRGEQCL" misc_feature 37..564 /gene="CLDN19" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 991 /gene="CLDN19" /experiment="...
XM_003642541.5 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 15 (CLDN15), transcript variant X3, mRNA. (3200 bp)
" /note="transcription start site" CDS 294..971 /gene="CLDN15" /codon_start=1 /product="claudin-15 isoform X2" /protein_id="XP_040535182.1" /db_xref="GeneID:424768" /translation="MASSSLQICSLLLALAGFTILLLTTMSNRWKISDTTAVLVPSEWISEGLWMDCGTTDFGAIQCMKFLHMLSSETHVQACRTLMIISILLGFKAAVVSLLGLKCTNVGLSDEDEKVKVAVTGGFLFILGGLCSMVAVSWYAAMITAPFFNPLYAGTKYKLGDALYLGWTGSVLCMLGGIFLTCPCKGKEKQEYSASKYRYSAGQASGQQQIYTEDAETVSSPKEYI" misc_feature 324..833 /gene="CLDN15" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 3200 /gene="CLDN15" /experiment="...
XM_040679248.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 8 (CLDN8), transcript variant X1, mRNA. (10275 bp)
" /note="transcription start site" CDS 3879..4553 /gene="CLDN8" /codon_start=1 /product="claudin-8" /protein_id="XP_040514193.1" /db_xref="GeneID:427974" /db_xref="CGNC:11818" /translation="MISGALQIAGLLLGGLGMIGTFAVTGMPQWRVSAFIENNIIVFETIWEGLWMHCIRQANIRMQCKVYDSVLALSPDLQASRGLMCAGSVLSFLAFLVATVGMKCTRCRQSGWPTKGYILVAAGLLFILSGTTALIPICWVANTIIRDFYNPVVNVAQKRELGEALYLGWVAAFCLLAAGAIFCCFCRCCEKTRSYNYSMPPQHLPLNQHLHGATESAYSKSQYV" misc_feature 3942..4424 /gene="CLDN8" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 10275 /gene="CLDN8" /...
XM_040658259.2 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 8 (CLDN8), transcript variant X1, mRNA. (10274 bp)
" /note="transcription start site" CDS 3875..4549 /gene="CLDN8" /codon_start=1 /product="claudin-8" /protein_id="XP_004938436.2" /db_xref="GeneID:427974" /db_xref="CGNC:11818" /translation="MISGALQIAGLLLGGLGMIGTFAVTGMPQWRVSAFIENNIIVFETIWEGLWMHCIRQANIRMQCKVYDSVLALSPDLQASRGLMCAGSVLSFLAFLVATVGMKCMRCRQSGWPTKGYILVAAGLLFILSGTTALIPICWVANTIIRDFYNPVVNVAQKRELGEALYLGWVAAFCLLAAGAIFCCFCRCCEKTRSYNYSMPPQHLPLNQHLHGATESAYSKSQYV" misc_feature 3938..4420 /gene="CLDN8" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 10274 /gene="CLDN8" /...
XM_004938379.5 - Gallus gallus (chicken) - NCBI - UCSC
PREDICTED: Gallus gallus claudin 15 (CLDN15), transcript variant X2, mRNA. (3034 bp)
" /note="transcription start site" CDS 128..805 /gene="CLDN15" /codon_start=1 /product="claudin-15 isoform X2" /protein_id="XP_040535181.1" /db_xref="GeneID:424768" /translation="MASSSLQICSLLLALAGFTILLLTTMSNRWKISDTTAVLVPSEWISEGLWMDCGTTDFGAIQCMKFLHMLSSETHVQACRTLMIISILLGFKAAVVSLLGLKCTNVGLSDEDEKVKVAVTGGFLFILGGLCSMVAVSWYAAMITAPFFNPLYAGTKYKLGDALYLGWTGSVLCMLGGIFLTCPCKGKEKQEYSASKYRYSAGQASGQQQIYTEDAETVSSPKEYI" misc_feature 158..667 /gene="CLDN15" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" polyA_site 3034 /gene="CLDN15" /experiment="...
XM_040679247.2 - Gallus gallus (chicken) - NCBI - UCSC

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/gg/claudin
lang : en | div : | spe : gg | query_string : claudin | format : html | download : 

0.000 | 0.000 | search_start;
0.094 | 0.094 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:claudin)%7C(nt:claudin)%7C(aa:claudin))?source=Gallus gallus (chicken)?to=0&format=json
0.184 | 0.089 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:claudin)%7C(nt:claudin)%7C(aa:claudin))?source=Gallus gallus (chicken)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.190 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]