LOCUS       XM_040659625            1571 bp    mRNA    linear   VRT 01-MAR-2022
DEFINITION  PREDICTED: Gallus gallus claudin 14 (CLDN14), mRNA.
ACCESSION   XM_040659625
VERSION     XM_040659625.2
DBLINK      BioProject: PRJNA698614
KEYWORDS    RefSeq.
SOURCE      Gallus gallus (chicken)
  ORGANISM  Gallus gallus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
            Phasianidae; Phasianinae; Gallus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052573.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Mar 1, 2022 this sequence version replaced XM_040659625.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gallus gallus Annotation Release 106
            Annotation Version          :: 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gallus gallus"
                     /mol_type="mRNA"
                     /isolate="bGalGal1"
                     /db_xref="taxon:9031"
                     /chromosome="1"
                     /sex="female"
                     /tissue_type="blood"
                     /country="USA: Fayetteville"
                     /lat_lon="36.0822 N 94.1719 W"
                     /collection_date="20-May-2019"
                     /collected_by="Nick Anthony"
     gene            1..1571
                     /gene="CLDN14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 25 long SRA reads, 19 Proteins,
                     and 97% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="CGNC:11984"
                     /db_xref="GeneID:427982"
     CDS             124..831
                     /gene="CLDN14"
                     /codon_start=1
                     /product="claudin-14"
                     /protein_id="XP_040515559.1"
                     /db_xref="GeneID:427982"
                     /db_xref="CGNC:11984"
                     /translation="

MASTAIQLLGFSLGLLGLIGTLIATILPHWWRTAHVGTNIITAVAYMKGLWMECVWHSTGVYQCQVHRSQLALPPDLQAARAMMVISCILSVLACVIAVIGMKCTRCAKGTSAKASIAVSGGIVFILAGLTCLVPVSWTTNDVVTDFYNPLLPQGMKYEIGQALYLGFVSASLTILGGALLCTSGQCGTDQGPRQPRPCSTRTAPSCRPPTAYKGNHASSLTSASHSGYRLNDYV"

     misc_feature    190..666
                     /gene="CLDN14"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      

tattaggagagcagaaggtgtcaaagtaaaacagctgcatatcttccaagaaaagcccgcgttttccgaaggaattcgagcggaggtgctttattaagggaaccagtcaggacaaacattagcatggcaagcacggccattcagttacttggcttctctcttggtctgctcggcctaattgggacattaattgctactattctgccgcactggtggcgaacggcgcatgtgggcaccaatattataacagctgtggcgtacatgaaagggctctggatggagtgcgtctggcacagcaccggcgtctaccagtgccaagtgcaccgctcgcagcttgcgctgccgcctgacctccaggcagcccgtgccatgatggtaatttcctgcatcctttctgtgctggcatgcgtgatcgccgtcatcggtatgaagtgcacgcgctgcgccaaagggacctctgccaaagcctccatcgcggtctctggagggattgttttcatcctggccggtctcacatgcctggtacccgtttcctggaccactaacgatgtcgttacagatttctacaacccgctgcttcctcaggggatgaagtatgagataggccaagctctgtacctgggctttgtctccgcatcgctgaccatcctcggcggtgccctgctctgcacctcaggtcagtgcggcacagaccagggcccacggcagccacggccctgcagcaccaggacggctccctcctgcagaccaccaactgcctacaagggaaaccacgcttcttccctgacatctgcttcccatagcggctacagattgaatgactatgtgtgagttccctatgagctgcctgcgggacgcagctgcgtcatagtttctgcatggcataagacaaagctaagacgatttttaatttataagggttgcaatacaaagtttactgttgtttttttttttttcttccttccctttctttccatagaaagaaagaatttgaatccagaactgctcgcttcagtgcatggaaaataaatgcaaagggaactatgatactccacggactgcaagttcctgcctacttcaagctggggttttgcatgcaggcagctcaagagcagttttgctaaaaatagtctttgagtttgcagtttctgccctgcaacaactacgaagtggccacaacttcttacttgagcagtgttcccacagacgatgcagttttgcctaaaagagagaatttcatggcaaagcacagcagtgatttcctgttgagtttctcatttccataatgtgtgatatttcactatgacaacttagttgacttaacttttttttttgtagtgtttagaaatacaaattttaatactattaaaagccatgtatttgatagcatgttgtagccaatattttaaaagtttctaccatatttttacctcataaaaataggattttaatactttcaaaaacataatggaaacaaacattttcagagtcatggtttgtgttggaagggacatttaagaccagctagttccaacctcctgctataggcagggacacctccctccagacca

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