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Previous release (v1)
2025-04-07 18:54:05, GGRNA : RefSeq release 229 (Mar, 2025)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
misc_feature 116..505 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 545..679 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 686..1033 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
Synonym: csp9
NM_001022775.3 -
Schizosaccharomyces pombe (fission yeast) -
NCBI -
PomBase
LOCUS NM_001018966 1460 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe argonaute inhibitor protein 1 (arb1), mRNA. ACCESSION NM_001018966 VERSION NM_001018966.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast)...misc_feature 180..1283 /gene="arb1" /locus_tag="SPOM_SPAC140.03" /gene_synonym="csp12" /note="Argonaute siRNA chaperone (ARC) complex subunit Arb1; Region: Arb1; pfam09692" /db_xref="CDD:430755" ORIGIN // REFERENCE 1 (bases 1 to 1460) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription...
Synonym: csp12
NM_001018966.3 -
Schizosaccharomyces pombe (fission yeast) -
NCBI -
PomBase
LOCUS NM_001019140 1088 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe argonaute binding protein 2 (arb2), mRNA. ACCESSION NM_001019140 VERSION NM_001019140.4 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is...
NM_001019140.4 -
Schizosaccharomyces pombe (fission yeast) -
NCBI -
PomBase
LOCUS NM_001022456 908 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe CLRC complex-Argonaute linker protein Stc1 (stc1), mRNA. ACCESSION NM_001022456 VERSION NM_001022456.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This...
NM_001022456.3 -
Schizosaccharomyces pombe (fission yeast) -
NCBI -
PomBase
misc_feature 466..>1023 /gene="tas3" /locus_tag="SPOM_SPBC83.03C" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" ORIGIN // REFERENCE 1 (bases 1 to 2174) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2174) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R.,...
NM_001021529.3 -
Schizosaccharomyces pombe (fission yeast) -
NCBI -
PomBase
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : https://ggrna.dbcls.jp/sp/Argonaute
lang : en |
div : |
spe : sp |
query_string : Argonaute |
format : html |
download :
0.000 | 0.000 | search_start;
0.118 | 0.118 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Schizosaccharomyces pombe (fission yeast)?to=0&format=json
0.150 | 0.032 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Schizosaccharomyces pombe (fission yeast)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.151 | 0.001 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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