GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2025-04-24 05:34:01, GGRNA : RefSeq release 229 (Mar, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Schizosaccharomyces pombe argonaute (ago1), mRNA. (2621 bp)
misc_feature 116..505 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 545..679 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 686..1033 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
Synonym: csp9
NM_001022775.3 - Schizosaccharomyces pombe (fission yeast) - NCBI - PomBase

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : https://ggrna.dbcls.jp/sp/Argonaute+%22PAZ+domain%22
lang : en | div : | spe : sp | query_string : Argonaute "PAZ domain" | format : html | download : 

0.000 | 0.000 | search_start;
0.079 | 0.079 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Schizosaccharomyces pombe (fission yeast)?to=0&format=json
0.089 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?source=Schizosaccharomyces pombe (fission yeast)?to=0&format=json
0.401 | 0.311 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?source=Schizosaccharomyces pombe (fission yeast)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.401 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]