{"error":"none","results":[{"aa_position":[],"accession":"NM_001422370","definition":"Oryza sativa Japonica Group serotonin N-acetyltransferase 2, chloroplastic-like (LOC4344423), mRNA; nuclear gene for chloroplast product.","division":"RefSeq","geneid":"4344423","gi":"","length":"886","nt_position":[],"snippet":"SNAT2\" /note=\"Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153\" /db_xref=\"CDD:442387\" ORIGIN // REFERENCE 1 (bases 1 to 886) AUTHORS Hwang,O.J. and Back,K. TITLE Simultaneous Suppression of Two Distinct Serotonin N-Acetyltransferase Isogenes by RNA Interference Leads to Severe Decreases in Melatonin and Accelerated Seed Deterioration in Rice JOURNAL Biomolecules 10 (1), 141 (2020) PUBMED 31952365 REMARK GeneRIF: Simultaneous Suppression of Two Distinct Serotonin N-Acetyltransferase Isogenes by RNA Interference Leads to Severe Decreases in Melatonin...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4344423","synonym":"OsJ_25726; OsSNAT2; P0015C07.5; SNAT2","version":"NM_001422370.1"},{"aa_position":[],"accession":"NM_001402574","definition":"Oryza sativa Japonica Group serotonin N-acetyltransferase 1, chloroplastic-like (SNAT1), mRNA; nuclear gene for chloroplast product.","division":"RefSeq","geneid":"4339123","gi":"","length":"1480","nt_position":[],"snippet":"exon 871..1466 /gene=\"SNAT1\" /gene_synonym=\"GNAT5; NSI; OsJ_018182; OsJ_18949; OsSNAT1; SNAT\" /inference=\"alignment:Splign:2.1.0\" ORIGIN // REFERENCE 1 (bases 1 to 1480) AUTHORS Hwang,O.J. and Back,K. TITLE Simultaneous Suppression of Two Distinct Serotonin N-Acetyltransferase Isogenes by RNA Interference Leads to Severe Decreases in Melatonin and Accelerated Seed Deterioration in Rice JOURNAL Biomolecules 10 (1), 141 (2020) PUBMED 31952365 REMARK GeneRIF: Simultaneous Suppression of Two Distinct Serotonin N-Acetyltransferase Isogenes by RNA Interference Leads to Severe Decreases in Melatonin...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"SNAT1","synonym":"GNAT5; NSI; OsJ_018182; OsJ_18949; OsSNAT1; SNAT","version":"NM_001402574.1"},{"aa_position":[],"accession":"NM_001409408","definition":"Oryza sativa Japonica Group S-adenosylmethionine synthase 3-like (LOC4325163), mRNA.","division":"RefSeq","geneid":"4325163","gi":"","length":"1645","nt_position":[],"snippet":"AUTHORS Li,W., Han,Y., Tao,F. and Chong,K. TITLE Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice JOURNAL J Plant Physiol 168 (15), 1837-1843 (2011) PUBMED 21757254 REMARK GeneRIF: RNA interference (RNAi) transgenic rice with downregulated transcripts of OsSAMS1, 2 and 3 showed pleiotropic phenotypes, including dwarfism, reduced fertility, delayed germination, as well as late flowering[SAMs1,2,3]...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4325163","synonym":"METK3; OsJ_001358","version":"NM_001409408.1"},{"aa_position":[],"accession":"XM_015768524","definition":"PREDICTED: Oryza sativa Japonica Group protein argonaute 17-like (LOC4328436), transcript variant X1, mRNA.","division":"RefSeq","geneid":"4328436","gi":"","length":"2991","nt_position":[],"snippet":"misc_feature 797..1078 /gene=\"LOC4328436\" /gene_synonym=\"AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545\" /note=\"PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846\" /db_xref=\"CDD:239212\" misc_feature 1211..2566 /gene=\"LOC4328436\" /gene_synonym=\"AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545\" /note=\"PIWI domain, Argonaute-like subfamily. Argonaute is the central component...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4328436","synonym":"AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545","version":"XM_015768524.3"},{"aa_position":[],"accession":"XM_015771633","definition":"PREDICTED: Oryza sativa Japonica Group uncharacterized protein (LOC4330879), mRNA.","division":"RefSeq","geneid":"4330879","gi":"","length":"4472","nt_position":[],"snippet":"gene=\"LOC4330879\" /note=\"MTR4 binding site [polypeptide binding]; other site\" /db_xref=\"CDD:412048\" misc_feature 920..2089 /gene=\"LOC4330879\" /note=\"necessary for RNA interference; Region: NRDE-2; pfam08424\" /db_xref=\"CDD:462472\" misc_feature 2963..>3403 /gene=\"LOC4330879\" /note=\"Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only]; Region: COG5191\" /db_xref=\"CDD:227518\" polyA_site 4472 /gene=\"LOC4330879\" /experiment=\"COORDINATES: polyA evidence [ECO:0006239]\" ORIGIN //...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4330879","synonym":"","version":"XM_015771633.3"},{"aa_position":[],"accession":"XM_015764423","definition":"PREDICTED: Oryza sativa Japonica Group uncharacterized protein (LOC4352551), transcript variant X2, mRNA.","division":"RefSeq","geneid":"4352551","gi":"","length":"5524","nt_position":[],"snippet":"misc_feature 3525 /gene=\"LOC4352551\" /note=\"necessary for RNA interference; Region: NRDE-2; pfam08424\" /db_xref=\"CDD:462472\" polyA_site 5524 /gene=\"LOC4352551\" /experiment=\"COORDINATES: polyA evidence [ECO:0006239]\" ORIGIN //...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4352551","synonym":"","version":"XM_015764423.3"},{"aa_position":[],"accession":"XM_015764422","definition":"PREDICTED: Oryza sativa Japonica Group uncharacterized protein (LOC4352551), transcript variant X1, mRNA.","division":"RefSeq","geneid":"4352551","gi":"","length":"5569","nt_position":[],"snippet":"misc_feature 3570 /gene=\"LOC4352551\" /note=\"necessary for RNA interference; Region: NRDE-2; pfam08424\" /db_xref=\"CDD:462472\" polyA_site 5569 /gene=\"LOC4352551\" /experiment=\"COORDINATES: polyA evidence [ECO:0006239]\" ORIGIN //...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4352551","synonym":"","version":"XM_015764422.3"},{"aa_position":[],"accession":"NM_001419866","definition":"Oryza sativa Japonica Group protein argonaute 3-like (LOC4336992), mRNA.","division":"RefSeq","geneid":"4336992","gi":"","length":"3356","nt_position":[],"snippet":"domain; Region: ArgoL1; pfam08699\" /db_xref=\"CDD:462567\" misc_feature 917..1249 /gene=\"LOC4336992\" /gene_synonym=\"AGO3; OsAGO3\" /note=\"PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846\" /db_xref=\"CDD:239212\" misc_feature order(1052..1054,1097..1099,1130..1132,1142..1144, 1199..1201,1220..1222,1226..1228) /gene=\"LOC4336992\" /gene_synonym=\"AGO3; OsAGO3\" /note...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4336992","synonym":"AGO3; OsAGO3","version":"NM_001419866.1"},{"aa_position":[],"accession":"NM_001401527","definition":"Oryza sativa Japonica Group rac-like GTP-binding protein 1 (LOC4325879), mRNA.","division":"RefSeq","geneid":"4325879","gi":"","length":"1173","nt_position":[],"snippet":"Yamaguchi,K., Imai,K., Akamatsu,A., Mihashi,M., Hayashi,N., Shimamoto,K. and Kawasaki,T. TITLE SWAP70 functions as a Rac/Rop guanine nucleotide-exchange factor in rice JOURNAL Plant J 70 (3), 389-397 (2012) PUBMED 22142166 REMARK GeneRIF: Reduction of OsSWAP70A and OsSWAP70B mRNA levels by RNA interference resulted in the suppression of chitin elicitor-induced defense gene expression and ROS production. It is likely that OsSWAP70 regulates immune responses through activation of OsRac1. REFERENCE 3 (bases 1 to 1173) AUTHORS Fujiwara,M., Hamada,S., Hiratsuka,M., Fukao,Y., Kawasaki,T. and...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4325879","synonym":"OsRac1; Rac1","version":"NM_001401527.1"},{"aa_position":[],"accession":"NM_001401875","definition":"Oryza sativa Japonica Group probable L-ascorbate peroxidase 8, chloroplastic (LOC4329643), transcript variant 2, mRNA; nuclear gene for chloroplast product.","division":"RefSeq","geneid":"4329643","gi":"","length":"1817","nt_position":[],"snippet":"Chen,H., Guo,L., Zhu,L. and Zhai,W. TITLE The rice thylakoid membrane-bound ascorbate peroxidase OsAPX8 functions in tolerance to bacterial blight JOURNAL Sci Rep 6, 26104 (2016) PUBMED 27185545 REMARK GeneRIF: The overexpressing lines exhibited increased tolerance to bacterial blight. The RNA interference (RNAi) lines were considerably more sensitive than the control plant. Publication Status: Online-Only REFERENCE 2 (bases 1 to 1817) AUTHORS Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4329643","synonym":"APX8; OsAPx08; OsAPx8; P0470G10.5","version":"NM_001401875.1"},{"aa_position":[],"accession":"NM_001401874","definition":"Oryza sativa Japonica Group probable L-ascorbate peroxidase 8, chloroplastic (LOC4329643), transcript variant 1, mRNA; nuclear gene for chloroplast product.","division":"RefSeq","geneid":"4329643","gi":"","length":"1820","nt_position":[],"snippet":"Chen,H., Guo,L., Zhu,L. and Zhai,W. TITLE The rice thylakoid membrane-bound ascorbate peroxidase OsAPX8 functions in tolerance to bacterial blight JOURNAL Sci Rep 6, 26104 (2016) PUBMED 27185545 REMARK GeneRIF: The overexpressing lines exhibited increased tolerance to bacterial blight. The RNA interference (RNAi) lines were considerably more sensitive than the control plant. Publication Status: Online-Only REFERENCE 2 (bases 1 to 1820) AUTHORS Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4329643","synonym":"APX8; OsAPx08; OsAPx8; P0470G10.5","version":"NM_001401874.1"},{"aa_position":[],"accession":"XM_066308808","definition":"PREDICTED: Oryza sativa Japonica Group protein argonaute 11-like (LOC4333733), mRNA.","division":"RefSeq","geneid":"4333733","gi":"","length":"3109","nt_position":[],"snippet":"note=\"Argonaute linker 1 domain; Region: ArgoL1; pfam08699\" /db_xref=\"CDD:462567\" misc_feature 1059..1412 /gene=\"LOC4333733\" /note=\"PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846\" /db_xref=\"CDD:239212\" misc_feature order(1215..1217,1260..1262,1293..1295,1305..1307, 1359..1361,1380..1382,1386..1388) /gene=\"LOC4333733\" /note=\"nucleic acid-binding interface...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4333733","synonym":"","version":"XM_066308808.1"},{"aa_position":[],"accession":"XM_015775890","definition":"PREDICTED: Oryza sativa Japonica Group protein argonaute 13-like (LOC4334374), mRNA.","division":"RefSeq","geneid":"4334374","gi":"","length":"4134","nt_position":[],"snippet":"misc_feature 609..953 /gene=\"LOC4334374\" /note=\"PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846\" /db_xref=\"CDD:239212\" misc_feature order(756..758,801..803,834..836,846..848,900..902, 921..923,927..929) /gene=\"LOC4334374\" /note=\"nucleic acid-binding interface [nucleotide binding]; other site\" /db_xref=\"CDD:239212\" misc_feature 1089..2435 /gene=\"...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4334374","synonym":"","version":"XM_015775890.3"},{"aa_position":[],"accession":"NM_001409344","definition":"Oryza sativa Japonica Group protein argonaute 17-like (LOC4328436), mRNA.","division":"RefSeq","geneid":"4328436","gi":"","length":"3003","nt_position":[],"snippet":"pfam08699\" /db_xref=\"CDD:462567\" misc_feature 907..1188 /gene=\"LOC4328436\" /gene_synonym=\"AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545\" /note=\"PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846\" /db_xref=\"CDD:239212\" misc_feature 1321..2676 /gene=\"LOC4328436\" /gene_synonym=\"AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545\" /note=\"PIWI domain, Argonaute-like subfamily....","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4328436","synonym":"AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545","version":"NM_001409344.1"},{"aa_position":[],"accession":"XM_015757500","definition":"PREDICTED: Oryza sativa Japonica Group endoribonuclease Dicer homolog 3b (LOC4348944), mRNA.","division":"RefSeq","geneid":"4348944","gi":"","length":"5412","nt_position":[],"snippet":"Dicer_dimer; pfam03368\" /db_xref=\"CDD:460900\" misc_feature 2799..3230 /gene=\"LOC4348944\" /note=\"PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the piwi and Dicer families. PAZ functions as a...; Region: PAZ; cl00301\" /db_xref=\"CDD:469713\" misc_feature order(2937..2939,3024..3026,3036..3038,3090..3092, 3192..3194,3198..3200) /gene=\"LOC4348944\" /note=\"nucleic acid-binding interface [nucleotide binding]; other site\" /db_xref=\"CDD:239210\"...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4348944","synonym":"","version":"XM_015757500.3"},{"aa_position":[],"accession":"XM_015780808","definition":"PREDICTED: Oryza sativa Japonica Group endoribonuclease Dicer homolog 4-like (LOC4336362), transcript variant X1, mRNA.","division":"RefSeq","geneid":"4336362","gi":"","length":"4685","nt_position":[],"snippet":"CDD:460900\" misc_feature 2026..2406 /gene=\"LOC4336362\" /gene_synonym=\"DCL4; OsDCL4; SHO1\" /note=\"PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the piwi and Dicer families. PAZ functions as a...; Region: PAZ; cl00301\" /db_xref=\"CDD:469713\" misc_feature order(2149..2151,2209..2211,2221..2223,2275..2277, 2365..2367,2371..2373) /gene=\"LOC4336362\" /gene_synonym=\"DCL4; OsDCL4; SHO1\" /note=\"nucleic acid-binding interface...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4336362","synonym":"DCL4; OsDCL4; SHO1","version":"XM_015780808.3"},{"aa_position":[],"accession":"NM_001402397","definition":"Oryza sativa Japonica Group endoribonuclease Dicer homolog 4-like (LOC4336362), mRNA.","division":"RefSeq","geneid":"4336362","gi":"","length":"5356","nt_position":[],"snippet":"CDD:460900\" misc_feature 2682..3062 /gene=\"LOC4336362\" /gene_synonym=\"DCL4; OsDCL4; SHO1\" /note=\"PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the piwi and Dicer families. PAZ functions as a...; Region: PAZ; cl00301\" /db_xref=\"CDD:469713\" misc_feature order(2805..2807,2865..2867,2877..2879,2931..2933, 3021..3023,3027..3029) /gene=\"LOC4336362\" /gene_synonym=\"DCL4; OsDCL4; SHO1\" /note=\"nucleic acid-binding interface...","source":"Oryza sativa Japonica Group (Japanese rice)","symbol":"LOC4336362","synonym":"DCL4; OsDCL4; SHO1","version":"NM_001402397.1"}],"summary":[{"count":17,"keyword":"RNA interference"},{"count":17,"keyword":"[INTERSECTION]"}],"time":"2026-04-24 22:16:46","version":"GGRNA.v2 : RefSeq release 233 (Jan, 2026)"}