GGRNA | Results

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PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X4, misc_RNA. (1456 bp)

LOCUS XR_013592010 1456 bp RNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X4, misc_RNA. ACCESSION XR_013592010 VERSION XR_013592010.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon....

XR_013592010.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin domain-containing protein 1 (LOC100182489), mRNA. (674 bp)

LOCUS XM_078636695 674 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin domain-containing protein 1 (LOC100182489), mRNA. ACCESSION XM_078636695 VERSION XM_078636695.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136104) annotated using gene prediction method: Gnomon. Also...

XM_078636695.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-18-like (LOC144749607), mRNA. (628 bp)

LOCUS XM_078637995 628 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-18-like (LOC144749607), mRNA. ACCESSION XM_078637995 VERSION XM_078637995.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq; includes ab initio. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136105) annotated using gene prediction method: Gnomon. Also...

XM_078637995.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-18 (LOC100179400), mRNA. (1235 bp)

LOCUS XM_078635293 1235 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-18 (LOC100179400), mRNA. ACCESSION XM_078635293 VERSION XM_078635293.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136103) annotated using gene prediction method: Gnomon. Also see: Documentation of...

XM_078635293.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1-like (LOC113475358), mRNA. (875 bp)

LOCUS XM_078634896 875 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1-like (LOC113475358), mRNA. ACCESSION XM_078634896 VERSION XM_078634896.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon. Also see: Documentation of...

XM_078634896.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-19-like (LOC100180326), mRNA. (1036 bp)

LOCUS XM_078632339 1036 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-19-like (LOC100180326), mRNA. ACCESSION XM_078632339 VERSION XM_078632339.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136100) annotated using gene prediction method: Gnomon. Also see: Documentation...

XM_078632339.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1 (LOC100176302), mRNA. (3228 bp)

LOCUS XM_078635288 3228 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1 (LOC100176302), mRNA. ACCESSION XM_078635288 VERSION XM_078635288.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136103) annotated using gene prediction method: Gnomon, supported by EST evidence. Also...

XM_078635288.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-7 (LOC100183075), mRNA. (751 bp)

LOCUS XM_002129961 751 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-7 (LOC100183075), mRNA. ACCESSION XM_002129961 VERSION XM_002129961.4 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136103) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI'...

XM_002129961.4 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1 (LOC100176657), mRNA. (1364 bp)

LOCUS XM_002120478 1364 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1 (LOC100176657), mRNA. ACCESSION XM_002120478 VERSION XM_002120478.6 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136100) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI...

XM_002120478.6 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin domain-containing protein 2-like (LOC100178438), mRNA. (1330 bp)

LOCUS XM_002130744 1330 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin domain-containing protein 2-like (LOC100178438), mRNA. ACCESSION XM_002130744 VERSION XM_002130744.4 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136094) annotated using gene prediction method: Gnomon....

XM_002130744.4 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1-like (LOC108949837), mRNA. (1112 bp)

LOCUS XM_018813689 1112 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1-like (LOC108949837), mRNA. ACCESSION XM_018813689 VERSION XM_018813689.3 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon. Also see: Documentation of...

XM_018813689.3 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1 (LOC100179981), transcript variant X2, mRNA. (972 bp)

LOCUS XM_018812221 972 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1 (LOC100179981), transcript variant X2, mRNA. ACCESSION XM_018812221 VERSION XM_018812221.3 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon. Also see...

XM_018812221.3 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1 (LOC100179981), transcript variant X1, mRNA. (1002 bp)

LOCUS XM_002128432 1002 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1 (LOC100179981), transcript variant X1, mRNA. ACCESSION XM_002128432 VERSION XM_002128432.5 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon. Also see...

XM_002128432.5 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X3, mRNA. (1284 bp)

LOCUS XM_009861697 1284 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X3, mRNA. ACCESSION XM_009861697 VERSION XM_009861697.3 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon....

XM_009861697.3 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X2, mRNA. (1276 bp)

LOCUS XM_026836337 1276 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X2, mRNA. ACCESSION XM_026836337 VERSION XM_026836337.2 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon....

XM_026836337.2 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X1, mRNA. (1276 bp)

LOCUS XM_026836336 1276 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-1-like (LOC100179431), transcript variant X1, mRNA. ACCESSION XM_026836336 VERSION XM_026836336.2 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon....

XM_026836336.2 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-7 (LOC100182324), mRNA. (1807 bp)

LOCUS XM_018813700 1807 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-7 (LOC100182324), mRNA. ACCESSION XM_018813700 VERSION XM_018813700.3 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136102) annotated using gene prediction method: Gnomon, supported by EST evidence. Also...

XM_018813700.3 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-19-like (LOC100177737), mRNA. (1452 bp)

LOCUS XM_018817021 1452 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-19-like (LOC100177737), mRNA. ACCESSION XM_018817021 VERSION XM_018817021.3 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon. Also see: Documentation...

XM_018817021.3 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X4, mRNA. (1773 bp)

LOCUS XM_002131937 1773 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X4, mRNA. ACCESSION XM_002131937 VERSION XM_002131937.5 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon,...

XM_002131937.5 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X3, mRNA. (1515 bp)

LOCUS XM_009863919 1515 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X3, mRNA. ACCESSION XM_009863919 VERSION XM_009863919.4 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon,...

XM_009863919.4 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X2, mRNA. (1889 bp)

LOCUS XM_026833772 1889 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X2, mRNA. ACCESSION XM_026833772 VERSION XM_026833772.2 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon,...

XM_026833772.2 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X1, mRNA. (1793 bp)

LOCUS XM_004225472 1793 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-4-like (LOC100178949), transcript variant X1, mRNA. ACCESSION XM_004225472 VERSION XM_004225472.5 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136093) annotated using gene prediction method: Gnomon,...

XM_004225472.5 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

PREDICTED: Ciona intestinalis claudin-16-like (LOC100186332), mRNA. (905 bp)

LOCUS XM_078628954 905 bp mRNA linear INV 21-JAN-2026 DEFINITION PREDICTED: Ciona intestinalis claudin-16-like (LOC100186332), mRNA. ACCESSION XM_078628954 VERSION XM_078628954.1 DBLINK BioProject: PRJNA1397229 KEYWORDS RefSeq; corrected model. SOURCE Ciona intestinalis (vase tunicate) ORGANISM Ciona intestinalis Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_136097) annotated using gene prediction method: Gnomon. Also see...

XM_078628954.1 - Ciona intestinalis (vase tunicate) - NCBI - UCSC

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0.000 | 0.000 | search_start;
0.078 | 0.078 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:claudin)%7C(nt:claudin)%7C(aa:claudin))?source=Ciona intestinalis (vase tunicate)?to=0&format=json
0.118 | 0.040 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:claudin)%7C(nt:claudin)%7C(aa:claudin))?source=Ciona intestinalis (vase tunicate)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.121 | 0.002 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

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