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2019-10-20 10:05:03, GGRNA : RefSeq release 96 (Sep, 2019)

Summary:

Results:

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Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)
LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated...
XM_024651321.1 - Strongyloides ratti - NCBI
Caenorhabditis remanei hypothetical protein (CRE_14480) mRNA, complete cds. (2583 bp)
misc_feature 16..2415 /locus_tag="CRE_14480" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 73..468 /locus_tag="CRE_14480" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 499..651 /locus_tag="CRE_14480" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 652..1014 /locus_tag="CRE_14480" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003107282.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_08398) mRNA, complete cds. (2571 bp)
misc_feature 79..2424 /locus_tag="CRE_08398" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 79..477 /locus_tag="CRE_08398" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 508..672 /locus_tag="CRE_08398" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 676..1041 /locus_tag="CRE_08398" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003101857.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_09584) mRNA, complete cds. (2709 bp)
misc_feature 73..2559 /locus_tag="CRE_09584" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 157..573 /locus_tag="CRE_09584" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 604..774 /locus_tag="CRE_09584" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 775..1140 /locus_tag="CRE_09584" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003103769.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_25241) mRNA, complete cds. (3177 bp)
misc_feature 250..2931 /locus_tag="CRE_25241" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 316..750 /locus_tag="CRE_25241" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 841..963 /locus_tag="CRE_25241" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1174..1506 /locus_tag="CRE_25241" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003113068.1 - Caenorhabditis remanei - NCBI
PREDICTED: Cajanus cajan protein argonaute 10-like (LOC109819045), partial mRNA. (811 bp)
note="Isocitrate/isopropylmalate dehydrogenase; Region: Iso_dh; cl00445" /db_xref="CDD:320975" misc_feature <146..277 /gene="LOC109819045" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 305..457 /gene="LOC109819045" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 458..799 /gene="LOC109819045" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_020384627.1 - Cajanus cajan (pigeon pea) - NCBI
Caenorhabditis remanei CRE-ALG-1 protein (Cre-alg-1) mRNA, complete cds. (3069 bp)
feature 424..2865 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 424..840 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature <1009..1110 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1111..1476 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing...
XM_003105478.1 - Caenorhabditis remanei - NCBI
PREDICTED: Mus musculus argonaute RISC catalytic subunit 4 (Ago4), transcript variant X4, mRNA. (8020 bp)
misc_feature <2659..2787 /gene="Ago4" /gene_synonym="5730550L01Rik; AI481660; Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature 2926..4233 /gene="Ago4" /gene_synonym="5730550L01Rik; AI481660; Eif2c4" /note="Piwi_ago-like: PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-...
Synonym: 5730550L01Rik; AI481660; Eif2c4
XM_006503483.4 - Mus musculus (mouse) - NCBI
PREDICTED: Mus caroli protein argonaute-1 (LOC110292125), transcript variant X3, mRNA. (7348 bp)
misc_feature 823..969 /gene="LOC110292125" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 970..1332 /gene="LOC110292125" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1126..1128,1171..1173,1213..1215,1225..1227, 1279..1281,1300..1302,1306..1308) /gene="...
XM_029475689.1 - Mus caroli (Ryukyu mouse) - NCBI
PREDICTED: Protobothrops mucrosquamatus argonaute RISC component 4 (AGO4), mRNA. (3017 bp)
misc_feature <81..344 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 378..527 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 528..890 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_015824155.1 - Protobothrops mucrosquamatus - NCBI
Caenorhabditis remanei hypothetical protein (CRE_20331) mRNA, complete cds. (2895 bp)
misc_feature 178..>495 /locus_tag="CRE_20331" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 925..1257 /locus_tag="CRE_20331" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1066..1068,1111..1113,1141..1143,1153..1155, 1207..1209,1228..1230,1234..1236) /...
XM_003106040.1 - Caenorhabditis remanei - NCBI
PREDICTED: Mus pahari argonaute RISC component 1 (LOC110323159), transcript variant X3, mRNA. (7407 bp)
misc_feature 863..1009 /gene="LOC110323159" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 1010..1372 /gene="LOC110323159" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1166..1168,1211..1213,1253..1255,1265..1267, 1319..1321,1340..1342,1346..1348) /gene="...
XM_021200288.2 - Mus pahari (shrew mouse) - NCBI
PREDICTED: Mus caroli argonaute RISC catalytic component 2 (Ago2), mRNA. (11177 bp)
misc_feature 442..666 /gene="Ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 694..846 /gene="Ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 847..1209 /gene="Ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_021183054.2 - Mus caroli (Ryukyu mouse) - NCBI
PREDICTED: Mus pahari argonaute RISC catalytic component 2 (Ago2), mRNA. (3516 bp)
misc_feature 351..575 /gene="Ago2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 603..755 /gene="Ago2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 756..1118 /gene="Ago2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_021216331.2 - Mus pahari (shrew mouse) - NCBI
PREDICTED: Mus pahari protein argonaute-4 (LOC110322815), mRNA. (3689 bp)
misc_feature 107..496 /gene="LOC110322815" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 527..679 /gene="LOC110322815" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 680..1042 /gene="LOC110322815" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_021199605.1 - Mus pahari (shrew mouse) - NCBI
PREDICTED: Protobothrops mucrosquamatus protein argonaute-3 (LOC107294752), mRNA. (2490 bp)
misc_feature <64..330 /gene="LOC107294752" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 361..510 /gene="LOC107294752" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 511..873 /gene="LOC107294752" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015824009.2 - Protobothrops mucrosquamatus - NCBI
PREDICTED: Mus musculus argonaute RISC catalytic subunit 3 (Ago3), transcript variant X8, mRNA. (15516 bp)
misc_feature <1017..1235 /gene="Ago3" /gene_synonym="AW048688; C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1029..1031,1074..1076,1116..1118,1128..1130, 1182..1184,1203..1205,1209..1211) /gene="Ago3" /gene_synonym="AW048688; C130014L07Rik; Eif2c3" /note="nucleic acid-binding...
Synonym: AW048688; C130014L07Rik; Eif2c3
XM_017320100.1 - Mus musculus (mouse) - NCBI
PREDICTED: Labrus bergylta protein argonaute-3 (LOC109983707), mRNA. (5469 bp)
misc_feature 369..653 /gene="LOC109983707" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 681..833 /gene="LOC109983707" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 834..1196 /gene="LOC109983707" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_020633535.2 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Mus caroli protein argonaute-1 (LOC110292125), transcript variant X1, mRNA. (7276 bp)
misc_feature 316..708 /gene="LOC110292125" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 742..888 /gene="LOC110292125" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 889..1251 /gene="LOC110292125" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_029475688.1 - Mus caroli (Ryukyu mouse) - NCBI
PREDICTED: Manacus vitellinus protein argonaute-1 (LOC103756552), mRNA. (6636 bp)
misc_feature 241..465 /gene="LOC103756552" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 499..645 /gene="LOC103756552" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 646..1008 /gene="LOC103756552" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_018081282.1 - Manacus vitellinus (golden-collared manakin) - NCBI
PREDICTED: Mus pahari argonaute RISC catalytic component 3 (Ago3), transcript variant X1, mRNA. (4342 bp)
misc_feature 493..777 /gene="Ago3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 805..957 /gene="Ago3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 958..1320 /gene="Ago3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_021201341.2 - Mus pahari (shrew mouse) - NCBI
PREDICTED: Labrus bergylta protein argonaute-2 (LOC109994634), mRNA. (2950 bp)
misc_feature 504..728 /gene="LOC109994634" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 756..908 /gene="LOC109994634" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 909..1271 /gene="LOC109994634" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_020648066.2 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Mus musculus argonaute RISC catalytic subunit 1 (Ago1), transcript variant X2, mRNA. (7442 bp)
misc_feature 894..1040 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 1041..1403 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...
Synonym: Eif2c1
XM_011240521.2 - Mus musculus (mouse) - NCBI
PREDICTED: Nannospalax galili protein argonaute-1 (LOC103733310), transcript variant X5, mRNA. (3333 bp)
misc_feature 196..342 /gene="LOC103733310" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 343..705 /gene="LOC103733310" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(499..501,544..546,586..588,598..600,652..654, 673..675,679..681) /gene="LOC103733310" /note...
XM_029563128.1 - Nannospalax galili (Upper Galilee mountains blind mole rat) - NCBI
PREDICTED: Mus pahari argonaute RISC component 1 (LOC110323159), transcript variant X1, mRNA. (7335 bp)
misc_feature 356..748 /gene="LOC110323159" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 782..928 /gene="LOC110323159" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 929..1291 /gene="LOC110323159" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_029539502.1 - Mus pahari (shrew mouse) - NCBI
PREDICTED: Mus caroli protein argonaute-4 (LOC110292285), transcript variant X1, mRNA. (4127 bp)
misc_feature 319..708 /gene="LOC110292285" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 739..891 /gene="LOC110292285" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 892..1254 /gene="LOC110292285" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_021159525.2 - Mus caroli (Ryukyu mouse) - NCBI
PREDICTED: Nannospalax galili argonaute RISC component 4 (Ago4), mRNA. (3638 bp)
misc_feature 199..453 /gene="Ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 490..636 /gene="Ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 637..999 /gene="Ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_017797896.2 - Nannospalax galili (Upper Galilee mountains blind mole rat) - NCBI
PREDICTED: Mus pahari argonaute RISC component 1 (LOC110323159), transcript variant X2, mRNA. (7325 bp)
misc_feature 355..747 /gene="LOC110323159" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 781..927 /gene="LOC110323159" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 928..1290 /gene="LOC110323159" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_021200287.2 - Mus pahari (shrew mouse) - NCBI
PREDICTED: Terrapene carolina triunguis protein argonaute-1 (LOC112108701), mRNA. (6496 bp)
misc_feature 239..463 /gene="LOC112108701" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 497..643 /gene="LOC112108701" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 644..1006 /gene="LOC112108701" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_024202909.1 - Terrapene carolina triunguis (Three-toed box turtle) - NCBI
PREDICTED: Takifugu rubripes argonaute RISC catalytic component 2 (LOC101079678), mRNA. (3981 bp)
misc_feature 348..2849 /gene="LOC101079678" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 357..773 /gene="LOC101079678" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 804..953 /gene="LOC101079678" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 954..1316 /gene="LOC101079678" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_003969270.3 - Takifugu rubripes (torafugu) - NCBI
PREDICTED: Labrus bergylta protein argonaute-4 (LOC109999969), transcript variant X2, mRNA. (5456 bp)
misc_feature 259..648 /gene="LOC1069" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 679..831 /gene="LOC1069" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 832..1194 /gene="LOC1069" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_020655159.2 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Takifugu rubripes argonaute RISC component 1 (LOC101062906), transcript variant X2, mRNA. (5542 bp)
misc_feature 435..2999 /gene="LOC101062906" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 507..923 /gene="LOC101062906" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 954..1103 /gene="LOC101062906" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1104..1466 /gene="LOC101062906" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003965633.3 - Takifugu rubripes (torafugu) - NCBI
PREDICTED: Labrus bergylta protein argonaute-4 (LOC109999969), transcript variant X1, mRNA. (5471 bp)
misc_feature 259..648 /gene="LOC1069" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 679..831 /gene="LOC1069" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 832..1194 /gene="LOC1069" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_020655158.2 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Terrapene carolina triunguis argonaute RISC catalytic component 2 (AGO2), transcript variant X1, mRNA. (6189 bp)
misc_feature 188..415 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 443..595 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 596..958 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc...
XM_026646723.2 - Terrapene carolina triunguis (Three-toed box turtle) - NCBI
PREDICTED: Labrus bergylta protein argonaute-3-like (LOC109990219), transcript variant X2, mRNA. (7434 bp)
misc_feature 705..989 /gene="LOC109990219" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1017..1169 /gene="LOC109990219" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1170..1532 /gene="LOC109990219" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_020642259.2 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Takifugu rubripes argonaute RISC component 1 (LOC101062906), transcript variant X1, mRNA. (5566 bp)
misc_feature 435..3023 /gene="LOC101062906" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 507..923 /gene="LOC101062906" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 954..1103 /gene="LOC101062906" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1104..1490 /gene="LOC101062906" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_011605043.2 - Takifugu rubripes (torafugu) - NCBI
PREDICTED: Labrus bergylta protein argonaute-3-like (LOC109990219), transcript variant X1, mRNA. (7467 bp)
misc_feature 705..989 /gene="LOC109990219" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1017..1169 /gene="LOC109990219" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1170..1532 /gene="LOC109990219" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_020642258.2 - Labrus bergylta (ballan wrasse) - NCBI
PREDICTED: Mus musculus argonaute RISC catalytic subunit 4 (Ago4), transcript variant X2, mRNA. (6402 bp)
misc_feature 434..847 /gene="Ago4" /gene_synonym="5730550L01Rik; AI481660; Eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 881..1030 /gene="Ago4" /gene_synonym="5730550L01Rik; AI481660; Eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1031..1393 /gene="Ago4" /gene_synonym="5730550L01Rik; AI481660; Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
Synonym: 5730550L01Rik; AI481660; Eif2c4
XM_006503481.4 - Mus musculus (mouse) - NCBI
PREDICTED: Terrapene carolina triunguis argonaute RISC component 4 (AGO4), mRNA. (6447 bp)
misc_feature 100..489 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 526..672 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 673..1035 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_024202908.2 - Terrapene carolina triunguis (Three-toed box turtle) - NCBI
PREDICTED: Takifugu rubripes argonaute RISC component 4 (LOC101078091), transcript variant X3, mRNA. (6345 bp)
misc_feature 196..2781 /gene="LOC101078091" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 253..666 /gene="LOC101078091" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 700..849 /gene="LOC101078091" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 850..1212 /gene="LOC101078091" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_003969181.3 - Takifugu rubripes (torafugu) - NCBI
PREDICTED: Terrapene carolina triunguis argonaute RISC catalytic component 2 (AGO2), transcript variant X2, mRNA. (6241 bp)
misc_feature 240..467 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 495..647 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 648..1010 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_026646729.2 - Terrapene carolina triunguis (Three-toed box turtle) - NCBI
PREDICTED: Takifugu rubripes argonaute RISC component 4 (LOC101078091), transcript variant X2, mRNA. (6380 bp)
misc_feature 196..2814 /gene="LOC101078091" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 253..666 /gene="LOC101078091" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 700..849 /gene="LOC101078091" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 850..1212 /gene="LOC101078091" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011609285.2 - Takifugu rubripes (torafugu) - NCBI
PREDICTED: Takifugu rubripes argonaute RISC component 4 (LOC101078091), transcript variant X1, mRNA. (6393 bp)
misc_feature 196..2829 /gene="LOC101078091" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 253..666 /gene="LOC101078091" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 700..849 /gene="LOC101078091" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 850..1212 /gene="LOC101078091" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011609284.2 - Takifugu rubripes (torafugu) - NCBI
PREDICTED: Arachis hypogaea protein argonaute PNH1 (LOC112708204), transcript variant X4, mRNA. (3240 bp)
misc_feature <637..831 /gene="LOC112708204" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 859..1011 /gene="LOC112708204" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1012..1356 /gene="LOC112708204" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_025760406.2 - Arachis hypogaea (peanut) - NCBI
PREDICTED: Arachis hypogaea protein argonaute PNH1 (LOC112708204), transcript variant X3, mRNA. (3239 bp)
misc_feature <636..830 /gene="LOC112708204" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 858..1010 /gene="LOC112708204" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1011..1355 /gene="LOC112708204" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_025760398.2 - Arachis hypogaea (peanut) - NCBI
PREDICTED: Arachis hypogaea protein argonaute PNH1 (LOC112708204), transcript variant X2, mRNA. (3236 bp)
misc_feature <633..827 /gene="LOC112708204" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 855..1007 /gene="LOC112708204" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1008..1352 /gene="LOC112708204" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_025760389.2 - Arachis hypogaea (peanut) - NCBI
PREDICTED: Arachis hypogaea protein argonaute PNH1 (LOC112708204), transcript variant X1, mRNA. (3243 bp)
misc_feature <640..834 /gene="LOC112708204" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 862..1014 /gene="LOC112708204" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1015..1359 /gene="LOC112708204" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_025760381.2 - Arachis hypogaea (peanut) - NCBI
PREDICTED: Drosophila hydei protein argonaute-2 (LOC111592223), transcript variant X3, mRNA. (3774 bp)
misc_feature 374..763 /gene="LOC111592223" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 791..943 /gene="LOC111592223" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 944..1306 /gene="LOC111592223" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_023304302.2 - Drosophila hydei - NCBI
PREDICTED: Mus musculus argonaute RISC catalytic subunit 1 (Ago1), transcript variant X1, mRNA. (7362 bp)
misc_feature 388..780 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 814..960 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 961..1323 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
Synonym: Eif2c1
XM_011240520.2 - Mus musculus (mouse) - NCBI
PREDICTED: Terrapene carolina triunguis argonaute RISC catalytic component 3 (LOC112108702), mRNA. (2964 bp)
misc_feature 373..657 /gene="LOC112108702" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 691..837 /gene="LOC112108702" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 838..1200 /gene="LOC112108702" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_024202910.1 - Terrapene carolina triunguis (Three-toed box turtle) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/Argonaute+%22PAZ+domain%22
lang : en | div : | spe : | query_string : Argonaute "PAZ domain" | format : html | download :

0.000 | 0.000 | search_start;
0.080 | 0.080 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.093 | 0.013 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.270 | 0.177 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.279 | 0.009 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]