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2020-06-02 17:16:49, GGRNA : RefSeq release 200 (May, 2020)

Summary:

Results:

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Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)
LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated...
XM_024651321.1 - Strongyloides ratti - NCBI
Caenorhabditis remanei hypothetical protein (CRE_14480) mRNA, complete cds. (2583 bp)
misc_feature 16..2415 /locus_tag="CRE_14480" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 73..468 /locus_tag="CRE_14480" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 499..651 /locus_tag="CRE_14480" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 652..1014 /locus_tag="CRE_14480" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003107282.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_08398) mRNA, complete cds. (2571 bp)
misc_feature 79..2424 /locus_tag="CRE_08398" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 79..477 /locus_tag="CRE_08398" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 508..672 /locus_tag="CRE_08398" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 676..1041 /locus_tag="CRE_08398" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003101857.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_09584) mRNA, complete cds. (2709 bp)
misc_feature 73..2559 /locus_tag="CRE_09584" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 157..573 /locus_tag="CRE_09584" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 604..774 /locus_tag="CRE_09584" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 775..1140 /locus_tag="CRE_09584" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003103769.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_25241) mRNA, complete cds. (3177 bp)
misc_feature 250..2931 /locus_tag="CRE_25241" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 316..750 /locus_tag="CRE_25241" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 841..963 /locus_tag="CRE_25241" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1174..1506 /locus_tag="CRE_25241" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003113068.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei CRE-ALG-1 protein (Cre-alg-1) mRNA, complete cds. (3069 bp)
feature 424..2865 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 424..840 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature <1009..1110 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1111..1476 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing...
XM_003105478.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_20331) mRNA, complete cds. (2895 bp)
misc_feature 178..>495 /locus_tag="CRE_20331" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 925..1257 /locus_tag="CRE_20331" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1066..1068,1111..1113,1141..1143,1153..1155, 1207..1209,1228..1230,1234..1236) /...
XM_003106040.1 - Caenorhabditis remanei - NCBI
PREDICTED: Anabas testudineus argonaute RISC component 4 (ago4), transcript variant X3, mRNA. (6874 bp)
misc_feature 268..657 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 694..840 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 841..1203 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_026347957.1 - Anabas testudineus (climbing perch) - NCBI
PREDICTED: Anabas testudineus argonaute RISC component 4 (ago4), transcript variant X2, mRNA. (6889 bp)
misc_feature 268..657 /gene="ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 694..840 /gene="ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 841..1203 /gene="ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_026347956.1 - Anabas testudineus (climbing perch) - NCBI
PREDICTED: Tursiops truncatus argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (15123 bp)
misc_feature 147..488 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(282..284,327..329,369..371,381..383,435..437, 456..458,462..464) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 621..1898 /gene="AGO3" /note="PIWI...
XM_019938127.2 - Tursiops truncatus (common bottlenose dolphin) - NCBI
PREDICTED: Fukomys damarensis argonaute RISC component 1 (Ago1), transcript variant X5, mRNA. (2470 bp)
misc_feature 183..599 /gene="Ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 630..779 /gene="Ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 780..1142 /gene="Ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_010645255.1 - Fukomys damarensis (Damara mole-rat) - NCBI
PREDICTED: Parus major argonaute RISC component 4 (AGO4), transcript variant X3, mRNA. (7072 bp)
misc_feature <1035..1298 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 1332..1481 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1482..1844 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...
XM_015649158.3 - Parus major (Great Tit) - NCBI
PREDICTED: Parus major protein argonaute-1 (LOC107214130), transcript variant X2, mRNA. (6165 bp)
misc_feature <101..367 /gene="LOC107214130" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 398..547 /gene="LOC107214130" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 548..910 /gene="LOC107214130" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015649166.3 - Parus major (Great Tit) - NCBI
PREDICTED: Camelus ferus argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (16180 bp)
misc_feature 516..800 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 834..980 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 981..1343 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_006186313.3 - Camelus ferus (Wild Bactrian camel) - NCBI
PREDICTED: Coturnix japonica argonaute RISC catalytic component 2 (AGO2), mRNA. (13291 bp)
misc_feature 272..2773 /gene="AGO2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 281..697 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 728..877 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 878..1240 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015856389.1 - Coturnix japonica (Japanese quail) - NCBI
PREDICTED: Parus major protein argonaute-1 (LOC107214130), transcript variant X4, mRNA. (6644 bp)
misc_feature 240..464 /gene="LOC107214130" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 498..644 /gene="LOC107214130" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 645..1007 /gene="LOC107214130" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015649167.2 - Parus major (Great Tit) - NCBI
PREDICTED: Parus major argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (6201 bp)
misc_feature 158..547 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 578..730 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 731..1093 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_015649157.2 - Parus major (Great Tit) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-4 (LOC113126231), transcript variant X3, mRNA. (5706 bp)
misc_feature 252..641 /gene="LOC113126231" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 672..824 /gene="LOC113126231" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 825..1187 /gene="LOC113126231" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_026300193.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Anabas testudineus protein argonaute-3 (LOC113169988), transcript variant X2, mRNA. (11485 bp)
misc_feature 1007..1291 /gene="LOC113169988" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 1325..1471 /gene="LOC113169988" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 1472..1834 /gene="LOC113169988" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_026371822.1 - Anabas testudineus (climbing perch) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-3 (LOC113136233), transcript variant X3, mRNA. (5015 bp)
misc_feature 1045..1329 /gene="LOC113136233" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1357..1509 /gene="LOC113136233" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1510..1872 /gene="LOC113136233" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_026316861.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Lynx canadensis argonaute RISC component 1 (AGO1), transcript variant X4, mRNA. (8612 bp)
misc_feature 249..641 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 675..821 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 822..1184 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_030325234.1 - Lynx canadensis (Canada lynx) - NCBI
PREDICTED: Anabas testudineus protein argonaute-3 (LOC113169988), transcript variant X1, mRNA. (11507 bp)
misc_feature 1008..1292 /gene="LOC113169988" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 1326..1472 /gene="LOC113169988" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 1473..1835 /gene="LOC113169988" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_026371821.1 - Anabas testudineus (climbing perch) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-3 (LOC113136233), transcript variant X1, mRNA. (5036 bp)
misc_feature 1045..1329 /gene="LOC113136233" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1357..1509 /gene="LOC113136233" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1510..1872 /gene="LOC113136233" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_026316860.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-4 (LOC113126231), transcript variant X2, mRNA. (5739 bp)
misc_feature 252..641 /gene="LOC113126231" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 672..824 /gene="LOC113126231" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 825..1187 /gene="LOC113126231" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_026300192.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Lynx canadensis argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (4165 bp)
misc_feature 487..771 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 805..951 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 952..1314 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_030325783.1 - Lynx canadensis (Canada lynx) - NCBI
PREDICTED: Parus major argonaute RISC catalytic component 2 (AGO2), transcript variant X2, mRNA. (14550 bp)
misc_feature 194..2695 /gene="AGO2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 203..619 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 650..799 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 800..1162 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015618337.2 - Parus major (Great Tit) - NCBI
PREDICTED: Parus major argonaute RISC catalytic component 2 (AGO2), transcript variant X1, mRNA. (14553 bp)
misc_feature 194..2698 /gene="AGO2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 203..622 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 653..802 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 803..1165 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015618336.3 - Parus major (Great Tit) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-4 (LOC113126231), transcript variant X1, mRNA. (5754 bp)
misc_feature 252..641 /gene="LOC113126231" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 672..824 /gene="LOC113126231" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 825..1187 /gene="LOC113126231" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_026300191.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-3-like (LOC113126172), transcript variant X2, mRNA. (3145 bp)
misc_feature 595..879 /gene="LOC113126172" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 907..1059 /gene="LOC113126172" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1060..1422 /gene="LOC113126172" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_026300047.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-3-like (LOC113126172), transcript variant X1, mRNA. (3166 bp)
misc_feature 595..879 /gene="LOC113126172" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 907..1059 /gene="LOC113126172" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1060..1422 /gene="LOC113126172" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_026300046.1 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Parus major argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (6322 bp)
misc_feature 126..2783 /gene="AGO4" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 135..548 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 582..731 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 732..1094 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015649156.2 - Parus major (Great Tit) - NCBI
PREDICTED: Orcinus orca argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (12899 bp)
misc_feature 318..710 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 744..890 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 891..1253 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_004266468.3 - Orcinus orca (killer whale) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-2 (LOC113126101), transcript variant X2, mRNA. (4115 bp)
misc_feature 531..755 /gene="LOC113126101" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 783..935 /gene="LOC113126101" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 936..1298 /gene="LOC113126101" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_026299925.2 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Mastacembelus armatus protein argonaute-2 (LOC113126101), transcript variant X1, mRNA. (4130 bp)
misc_feature 546..770 /gene="LOC113126101" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 798..950 /gene="LOC113126101" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 951..1313 /gene="LOC113126101" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_026299924.2 - Mastacembelus armatus (zig-zag eel) - NCBI
PREDICTED: Fukomys damarensis argonaute RISC component 4 (Ago4), mRNA. (6284 bp)
misc_feature 204..458 /gene="Ago4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 495..641 /gene="Ago4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 642..1004 /gene="Ago4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_019204284.2 - Fukomys damarensis (Damara mole-rat) - NCBI
PREDICTED: Parus major protein argonaute-3 (LOC107214129), transcript variant X1, mRNA. (7086 bp)
misc_feature 319..2838 /gene="LOC107214129" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 319..762 /gene="LOC107214129" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 793..942 /gene="LOC107214129" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 943..1305 /gene="LOC107214129" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_015649161.2 - Parus major (Great Tit) - NCBI
PREDICTED: Bombus impatiens protein argonaute-2 (LOC100748831), mRNA. (4278 bp)
misc_feature 1159..1548 /gene="LOC100748831" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1576..1728 /gene="LOC100748831" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1729..2091 /gene="LOC100748831" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_024371992.2 - Bombus impatiens (common eastern bumble bee) - NCBI
Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. (903 bp)
LOCUS XM_024650915 903 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. ACCESSION XM_024650915 VERSION XM_024650915.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not...
XM_024650915.1 - Strongyloides ratti - NCBI
PREDICTED: Coturnix japonica argonaute RISC component 4 (LOC107323822), transcript variant X2, mRNA. (5467 bp)
misc_feature 279..533 /gene="LOC107323822" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 570..716 /gene="LOC107323822" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 717..1079 /gene="LOC107323822" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015883236.2 - Coturnix japonica (Japanese quail) - NCBI
PREDICTED: Coturnix japonica argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (10160 bp)
misc_feature 248..2842 /gene="AGO3" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 296..739 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 770..919 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 920..1282 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015883233.2 - Coturnix japonica (Japanese quail) - NCBI
PREDICTED: Coturnix japonica argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (10133 bp)
misc_feature 248..2815 /gene="AGO3" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 296..739 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 770..919 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 920..1282 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_015883234.2 - Coturnix japonica (Japanese quail) - NCBI
PREDICTED: Orcinus orca protein argonaute-4 (LOC101280127), transcript variant X1, mRNA. (3553 bp)
misc_feature 318..707 /gene="LOC101280127" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 738..890 /gene="LOC101280127" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 891..1253 /gene="LOC101280127" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_004266471.3 - Orcinus orca (killer whale) - NCBI
Sus scrofa argonaute RISC catalytic component 2 (AGO2), mRNA. (2583 bp)
misc_feature 76..2577 /gene="AGO2" /gene_synonym="EIF2C2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 85..501 /gene="AGO2" /gene_synonym="EIF2C2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 532..681 /gene="AGO2" /gene_synonym="EIF2C2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 682..1044 /gene="AGO2" /gene_synonym="EIF2C2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...
Synonym: EIF2C2
NM_001194975.1 - Sus scrofa (pig) - NCBI
PREDICTED: Drosophila miranda protein argonaute-2 (LOC108159004), transcript variant X5, mRNA. (6385 bp)
misc_feature 1332..1721 /gene="LOC108159004" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1749..1901 /gene="LOC108159004" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1902..2264 /gene="LOC108159004" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_017291877.2 - Drosophila miranda - NCBI
PREDICTED: Drosophila virilis protein argonaute-2 (LOC6624789), transcript variant X4, mRNA. (5661 bp)
misc_feature 305..2884 /gene="LOC6624789" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 347..760 /gene="LOC6624789" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 791..940 /gene="LOC6624789" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 941..1303 /gene="LOC6624789" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway...
XM_015174245.2 - Drosophila virilis - NCBI
PREDICTED: Drosophila miranda protein argonaute-2 (LOC108159004), transcript variant X4, mRNA. (5845 bp)
misc_feature 896..1285 /gene="LOC108159004" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1313..1465 /gene="LOC108159004" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1466..1828 /gene="LOC108159004" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_017291875.2 - Drosophila miranda - NCBI
PREDICTED: Drosophila pseudoobscura protein argonaute-2 (LOC4804375), transcript variant X6, mRNA. (6262 bp)
misc_feature 1305..1694 /gene="LOC4804375" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 1722..1874 /gene="LOC4804375" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1875..2237 /gene="LOC4804375" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015184411.2 - Drosophila pseudoobscura - NCBI
PREDICTED: Drosophila mojavensis protein argonaute-2 (LOC6580895), transcript variant X3, mRNA. (4800 bp)
misc_feature 546..3131 /gene="LOC6580895" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 594..1007 /gene="LOC6580895" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 1038..1187 /gene="LOC6580895" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1188..1550 /gene="LOC6580895" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_015164525.2 - Drosophila mojavensis - NCBI
Phytophthora infestans T30-4 Argonaute5 (AGO5) (PITG_01444) mRNA, complete cds. (2496 bp)
misc_feature <103..459 /locus_tag="PITG_01444" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 124..2490 /locus_tag="PITG_01444" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 493..633 /locus_tag="PITG_01444" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 637..981 /locus_tag="PITG_01444" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_002908063.1 - Phytophthora infestans T30-4 - NCBI
PREDICTED: Drosophila mojavensis protein argonaute-2 (LOC6580895), transcript variant X2, mRNA. (4860 bp)
misc_feature 606..3191 /gene="LOC6580895" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 654..1067 /gene="LOC6580895" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 1098..1247 /gene="LOC6580895" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1248..1610 /gene="LOC6580895" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_015164524.2 - Drosophila mojavensis - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/Argonaute+%22PAZ+domain%22
lang : en | div : | spe : | query_string : Argonaute "PAZ domain" | format : html | download :

0.000 | 0.000 | search_start;
0.079 | 0.079 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.094 | 0.015 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.273 | 0.179 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.282 | 0.009 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]