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2024-04-26 14:42:06, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Rattus norvegicus crystallin, gamma F (Crygf), transcript variant X2, mRNA. (438 bp)
gccctacttcagccgctgcaactctgtgcgcgtggacagtggctgctggatgctctatgagcagcccaacttcacaggctgccagtatttccttcgtcgcggggagtaccctgactaccagcagtggatgggtttcagcgactctgtccgctcctgccacctcatcccccacaatcaggatctacgagcgagaggactacagaggccagatggtggagatcacagacgactgcccccacctgcaggaccgcttccacttcagtgacttccactccttccacgtgatagagggctactgggtcctctacgagatgcccaactaccgggggcggcagtacctgctgaggcccagggaata
position 369
Synonym: Cryg6; Len
XM_039084220.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus crystallin, gamma F (Crygf), mRNA. (684 bp)
gctgcaactctgtgcgcgtggacagtggctgctggatgctctatgagcagcccaacttcacaggctgccagtatttccttcgtcgcggggagtaccctgactaccagcagtggatgggtttcagcgactctgtccgctcctgccacctcatcccccactccagctctcacagaatcaggatctacgagcgagaggactacagaggccagatggtggagatcacagacgactgcccccacctgcaggaccgcttccacttcagtgacttccactccttccacgtgatagagggctactgggtcctctacgagatgcccaactaccgggggcggcagtacctgctgaggcccagggaatacaggcgctaccacgactggggcgccatgaatgccagggtgggctctctgaggagaatcatggattactattgaattgtcttactctgccctttcatcatttggaagttaataaaatatttcctgtgtgttccatgca
position 478
Synonym: Cryg6; Len
NM_001109557.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus crystallin, gamma F (Crygf), transcript variant X1, mRNA. (528 bp)
gcaactctgtgcgcgtggacagtggctgctggatgctctatgagcagcccaacttcacaggctgccagtatttccttcgtcgcggggagtaccctgactaccagcagtggatgggtttcagcgactctgtccgctcctgccacctcatcccccacaaggcgggctctcacagaatcaggatctacgagcgagaggactacagaggccagatggtggagatcacagacgactgcccccacctgcaggaccgcttccacttcagtgacttccactccttccacgtgatagagggctactgggtcctctacgagatgcccaactaccgggggcggcagtacctgctgaggcccagggaatacaggcgctaccacgactggggcgccatgaatgccagggtgggctctctgaggagaatcatggattactattga
position 386
Synonym: Cryg6; Len
XM_039084219.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

Data Export:

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/rn/seq%3aAGGGCTACTGGGTCCTCTACGAGAT
lang : en | div : | spe : rn | query_string : seq:AGGGCTACTGGGTCCTCTACGAGAT | format : html | download : 

0.000 | 0.000 | search_start;
0.090 | 0.090 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:AGGGCTACTGGGTCCTCTACGAGAT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.101 | 0.011 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:AGGGCTACTGGGTCCTCTACGAGAT)?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.101 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]