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2017-04-30 12:02:31, GGRNA : RefSeq release 81 (Mar, 2017)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens NANOG neighbor homeobox (NANOGNB), mRNA. (907 bp)
LOCUS NM_001145465 907 bp mRNA linear PRI 02-FEB-2014 DEFINITION Homo sapiens NANOG neighbor homeobox (NANOGNB), mRNA. ACCESSION NM_001145465 XR_040558 XR_040559 XR_040560 VERSION NM_001145465.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY151139.1. On or before Mar 1, 2009 this...
NM_001145465.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens Nanog homeobox (NANOG), transcript variant 2, mRNA. (2055 bp)
LOCUS NM_001297698 2055 bp mRNA linear PRI 10-SEP-2015 DEFINITION Homo sapiens Nanog homeobox (NANOG), transcript variant 2, mRNA. ACCESSION NM_001297698 XM_005253484 VERSION NM_001297698.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC425336.1, AY578089.1, AC006517.46 and AI656990.1. On Jul 10, 2014...
NM_001297698.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens Nanog homeobox (NANOG), transcript variant 1, mRNA. (2103 bp)
LOCUS NM_024865 2103 bp mRNA linear PRI 10-SEP-2015 DEFINITION Homo sapiens Nanog homeobox (NANOG), transcript variant 1, mRNA. ACCESSION NM_024865 VERSION NM_024865.3 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DC425336.1, AK290896.1, AC006517.46 and AI656990.1. On Jul 10, 2014 this sequence version...
NM_024865.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens Nanog homeobox (NANOG), transcript variant X2, mRNA. (1284 bp)
LOCUS XM_011520852 1284 bp mRNA linear PRI 06-JUN-2016 DEFINITION PREDICTED: Homo sapiens Nanog homeobox (NANOG), transcript variant X2, mRNA. ACCESSION XM_011520852 VERSION XM_011520852.1 DBLINK BioProject: PRJNA168 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000012.12) annotated...
XM_011520852.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens Nanog homeobox (NANOG), transcript variant X1, mRNA. (1356 bp)
LOCUS XM_011520850 1356 bp mRNA linear PRI 06-JUN-2016 DEFINITION PREDICTED: Homo sapiens Nanog homeobox (NANOG), transcript variant X1, mRNA. ACCESSION XM_011520850 VERSION XM_011520850.1 DBLINK BioProject: PRJNA168 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000012.12) annotated...
XM_011520850.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens developmental pluripotency associated 4 (DPPA4), transcript variant 3, mRNA. (2527 bp)
therapeutic target for colon cancer JOURNAL J. Exp. Clin. Cancer Res. 34, 60 (2015) PUBMED 26063247 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2527) AUTHORS Amini S, Fathi F, Mobalegi J, Sofimajidpour H and Ghadimi T. TITLE The expressions of stem cell markers: Oct4, Nanog, Sox2, nucleostemin, Bmi, Zfx, Tcl1, Tbx3, Dppa4, and Esrrb in bladder, colon, and prostate cancer, and certain cancer cell lines JOURNAL Anat Cell Biol 47 (1), 1-11 (2014) PUBMED 24693477 REFERENCE 6 (bases 1 to 2527) AUTHORS Chakravarthy H, Boer B, Desler M, Mallanna SK, McKeithan TW and Rizzino A....
Synonym: 2410091M23Rik
NM_001348929.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens developmental pluripotency associated 4 (DPPA4), transcript variant 2, mRNA. (2750 bp)
therapeutic target for colon cancer JOURNAL J. Exp. Clin. Cancer Res. 34, 60 (2015) PUBMED 26063247 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2750) AUTHORS Amini S, Fathi F, Mobalegi J, Sofimajidpour H and Ghadimi T. TITLE The expressions of stem cell markers: Oct4, Nanog, Sox2, nucleostemin, Bmi, Zfx, Tcl1, Tbx3, Dppa4, and Esrrb in bladder, colon, and prostate cancer, and certain cancer cell lines JOURNAL Anat Cell Biol 47 (1), 1-11 (2014) PUBMED 24693477 REFERENCE 6 (bases 1 to 2750) AUTHORS Chakravarthy H, Boer B, Desler M, Mallanna SK, McKeithan TW and Rizzino A....
Synonym: 2410091M23Rik
NM_001348928.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens tudor domain containing 12 (TDRD12), mRNA. (1617 bp)
TITLE New loci associated with kidney function and chronic kidney disease JOURNAL Nat. Genet. 42 (5), 376-384 (2010) PUBMED 20383146 REFERENCE 3 (bases 1 to 1617) AUTHORS Mitsui K, Tokuzawa Y, Itoh H, Segawa K, Murakami M, Takahashi K, Maruyama M, Maeda M and Yamanaka S. TITLE The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells JOURNAL Cell 113 (5), 631-642 (2003) PUBMED 12787504...
Synonym: ECAT8
NM_001110822.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens POU class 5 homeobox 1B (POU5F1B), mRNA. (1599 bp)
PUBMED 23933063 REFERENCE 2 (bases 1 to 1599) AUTHORS Dentelli P, Barale C, Togliatto G, Trombetta A, Olgasi C, Gili M, Riganti C, Toppino M and Brizzi MF. TITLE A diabetic milieu promotes OCT4 and NANOG production in human visceral-derived adipose stem cells JOURNAL Diabetologia 56 (1), 173-184 (2013) PUBMED 23064289 REMARK GeneRIF: Data suggest that expression of Oct4 and NANOG (Nanog homeobox protein) is up-regulated in visceral adipose tissue stem cells in type 2 diabetes as compared to control; expression is also up-regulated in hyperglycemic conditions. REFERENCE 3 (bases 1 to 1599)...
Synonym: OCT4-PG1; OCT4PG1; OTF3C; OTF3P1; POU5F1P1; POU5F1P4; POU5FLC20; POU5FLC8
NM_001159542.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens deleted in azoospermia like (DAZL), transcript variant 1, mRNA. (3108 bp)
PUBMED 24015185 REMARK GeneRIF: Abnormal DNA methylation of the DAZL promoter might represent an epigenetic marker of male infertility. Publication Status: Online-Only REFERENCE 5 (bases 1 to 3108) AUTHORS Stefanidis K, Pergialiotis V, Christakis D, Loutradis D and Antsaklis A. TITLE Nodal, Nanog, DAZL and SMAD gene expression in human amniotic fluid stem cells JOURNAL J Stem Cells 8 (1), 17-23 (2013) PUBMED 24459810 REMARK GeneRIF: Amniotic fluid-derived stem cells (AFSc) seem to express Nodal, Nanog and DAZL and it speculated that the regulation of self-renewal in AFSc could be similar as in...
Synonym: DAZH; DAZL1; DAZLA; SPGYLA
NM_001190811.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens developmental pluripotency associated 3 (DPPA3), mRNA. (1079 bp)
In mice, knockout experiments show this gene may be a maternal factor in cleavage stage embryogenesis. Publication Status: Online-Only REFERENCE 7 (bases 1 to 1079) AUTHORS Clark AT, Rodriguez RT, Bodnar MS, Abeyta MJ, Cedars MI, Turek PJ, Firpo MT and Reijo Pera RA. TITLE Human STELLAR, NANOG, and GDF3 genes are expressed in pluripotent cells and map to chromosome 12p13, a hotspot for teratocarcinoma JOURNAL Stem Cells 22 (2), 169-179 (2004) PUBMED 14990856 REFERENCE 8 (bases 1 to 1079) AUTHORS Payer B, Saitou M, Barton SC, Thresher R, Dixon JP, Zahn D, Colledge WH, Carlton MB, Nakano T and...
Synonym: STELLA
NM_199286.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens deleted in azoospermia like (DAZL), transcript variant 2, mRNA. (3054 bp)
PUBMED 24015185 REMARK GeneRIF: Abnormal DNA methylation of the DAZL promoter might represent an epigenetic marker of male infertility. Publication Status: Online-Only REFERENCE 5 (bases 1 to 3054) AUTHORS Stefanidis K, Pergialiotis V, Christakis D, Loutradis D and Antsaklis A. TITLE Nodal, Nanog, DAZL and SMAD gene expression in human amniotic fluid stem cells JOURNAL J Stem Cells 8 (1), 17-23 (2013) PUBMED 24459810 REMARK GeneRIF: Amniotic fluid-derived stem cells (AFSc) seem to express Nodal, Nanog and DAZL and it speculated that the regulation of self-renewal in AFSc could be similar as in...
Synonym: DAZH; DAZL1; DAZLA; SPGYLA
NM_001351.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens frizzled class receptor 9 (FZD9), mRNA. (2342 bp)
FZD3" /experiment="experimental evidence, no additional details recorded" ORIGIN // REFERENCE 1 (bases 1 to 2342) AUTHORS Trubiani O, Zalzal SF, Paganelli R, Marchisio M, Giancola R, Pizzicannella J, Buhring HJ, Piattelli M, Caputi S and Nanci A. TITLE Expression profile of the embryonic markers nanog, OCT-4, SSEA-1, SSEA-4, and frizzled-9 receptor in human periodontal ligament mesenchymal stem cells JOURNAL J. Cell. Physiol. 225 (1), 123-131 (2010) PUBMED 20458727 REMARK GeneRIF: The presence of nanog, Oct-4, SSEA-1, and SSEA-4 suggests that periodontal ligament mesenchymal stem cells are...
Synonym: CD349; FZD3
NM_003508.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens growth differentiation factor 3 (GDF3), mRNA. (1267 bp)
African Americans JOURNAL Pharmacogenomics J. 14 (1), 35-40 (2014) PUBMED 23400010 REFERENCE 3 (bases 1 to 1267) AUTHORS Park SW, Lim HY, Do HJ, Sung B, Huh SH, Uhm SJ, Song H, Chung HJ, Kim JH, Kim NH and Kim JH. TITLE Regulation of human growth and differentiation factor 3 gene expression by NANOG in human embryonic carcinoma NCCIT cells JOURNAL FEBS Lett. 586 (19), 3529-3535 (2012) PUBMED 22963770 REMARK GeneRIF: first evidence that NANOG is a transcriptional activator of the expression of the oncogenic growth factor GDF3 in embryonic carcinoma cells REFERENCE 4 (bases 1 to 1267) AUTHORS Li...
Synonym: KFS3; MCOP7; MCOPCB6
NM_020634.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens long intergenic non-protein coding RNA, regulator of reprogramming (LINC-ROR), long non-coding RNA. (2591 bp)
a lincRNA as a MicroRNA sponge in embryonic stem cell self-renewal JOURNAL Dev. Cell 25 (1), 1-2 (2013) PUBMED 23597480 REFERENCE 5 (bases 1 to 2591) AUTHORS Wang Y, Xu Z, Jiang J, Xu C, Kang J, Xiao L, Wu M, Xiong J, Guo X and Liu H. TITLE Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal JOURNAL Dev. Cell 25 (1), 69-80 (2013) PUBMED 23541921 REMARK GeneRIF: Linc-RoR expression is positively correlated with the undifferentiated embryonic stem cell state. REFERENCE 6 (bases 1 to 2591) AUTHORS Zhang A, Zhou N, Huang J, Liu Q, Fukuda K...
Synonym: lincRNA-RoR; ROR
NR_048536.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens LINE1 type transposase domain containing 1 (L1TD1), transcript variant 2, mRNA. (3894 bp)
PUBMED 25702638 REMARK GeneRIF: we show that L1TD1 is a part of the pluripotency interactome network of OCT4, SOX2, and NANOG, bridging nuclear and cytoplasmic regulation and highlighting the importance of RNA biology in pluripotency. REFERENCE 2 (bases 1 to 3894) AUTHORS McLaughlin RN Jr, Young JM...undifferentiated human embryonic stem cells JOURNAL PLoS ONE 6 (4), E19355 (2011) PUBMED 21559406 REMARK GeneRIF: L1TD1 is a downstream target of Nanog and represents a useful marker for identifying undifferentiated hESC Publication Status: Online-Only REFERENCE 9 (bases 1 to 3894) AUTHORS Yamamoto...
Synonym: ECAT11
NM_019079.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens LINE1 type transposase domain containing 1 (L1TD1), transcript variant 1, mRNA. (4005 bp)
PUBMED 25702638 REMARK GeneRIF: we show that L1TD1 is a part of the pluripotency interactome network of OCT4, SOX2, and NANOG, bridging nuclear and cytoplasmic regulation and highlighting the importance of RNA biology in pluripotency. REFERENCE 2 (bases 1 to 4005) AUTHORS McLaughlin RN Jr, Young JM...undifferentiated human embryonic stem cells JOURNAL PLoS ONE 6 (4), E19355 (2011) PUBMED 21559406 REMARK GeneRIF: L1TD1 is a downstream target of Nanog and represents a useful marker for identifying undifferentiated hESC Publication Status: Online-Only REFERENCE 9 (bases 1 to 4005) AUTHORS Yamamoto...
Synonym: ECAT11
NM_001164835.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 6, mRNA. (1524 bp)
variation 1505 /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="t" /db_xref="dbSNP:3180416" ORIGIN // REFERENCE 1 (bases 1 to 1524) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NM_001331019.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens acrosin binding protein (ACRBP), mRNA. (1886 bp)
gene="ACRBP" /gene_synonym="CT23; OY-TES-1; SP32" /experiment="experimental evidence, no additional details recorded" ORIGIN // REFERENCE 1 (bases 1 to 1886) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells caused 2 opposite effects on cell proliferation: promotion by upregulating...
Synonym: CT23; OY-TES-1; SP32
NM_032489.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 7, non-coding RNA. (1615 bp)
variation 1596 /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="t" /db_xref="dbSNP:3180416" ORIGIN // REFERENCE 1 (bases 1 to 1615) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NR_138531.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 3, mRNA. (1489 bp)
complement(1488) /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="g" /db_xref="dbSNP:782182483" ORIGIN // REFERENCE 1 (bases 1 to 1489) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NM_001297603.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 2, mRNA. (1733 bp)
variation 1714 /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="t" /db_xref="dbSNP:3180416" ORIGIN // REFERENCE 1 (bases 1 to 1733) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NM_001297602.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens Wnt family member 5B (WNT5B), transcript variant 2, mRNA. (2184 bp)
JOURNAL J. Biol. Chem. 289 (26), 18373-18386 (2014) PUBMED 24841200 REMARK GeneRIF: Knocking down Wnt5b expression reduced phospho-PKCA levels and cell migration. REFERENCE 4 (bases 1 to 2184) AUTHORS Sun D, Qin L, Xu Y, Liu JX, Tian LP and Qian HX. TITLE Influence of adriamycin on changes in Nanog, Oct-4, Sox2, ARID1 and Wnt5b expression in liver cancer stem cells JOURNAL World J. Gastroenterol. 20 (22), 6974-6980 (2014) PUBMED 24944491 REMARK GeneRIF: Report increased Wnt5b levels in adriamycin treated liver cancer stem cells within 4h of treatment. REFERENCE 5 (bases 1 to 2184) AUTHORS Yang...
NM_030775.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens Wnt family member 5B (WNT5B), transcript variant 1, mRNA. (2251 bp)
JOURNAL J. Biol. Chem. 289 (26), 18373-18386 (2014) PUBMED 24841200 REMARK GeneRIF: Knocking down Wnt5b expression reduced phospho-PKCA levels and cell migration. REFERENCE 4 (bases 1 to 2251) AUTHORS Sun D, Qin L, Xu Y, Liu JX, Tian LP and Qian HX. TITLE Influence of adriamycin on changes in Nanog, Oct-4, Sox2, ARID1 and Wnt5b expression in liver cancer stem cells JOURNAL World J. Gastroenterol. 20 (22), 6974-6980 (2014) PUBMED 24944491 REMARK GeneRIF: Report increased Wnt5b levels in adriamycin treated liver cancer stem cells within 4h of treatment. REFERENCE 5 (bases 1 to 2251) AUTHORS Yang...
NM_032642.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 5, non-coding RNA. (1792 bp)
variation 1773 /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="t" /db_xref="dbSNP:3180416" ORIGIN // REFERENCE 1 (bases 1 to 1792) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NR_123727.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens KH domain containing 3 like, subcortical maternal complex member (KHDC3L), mRNA. (1027 bp)
family JOURNAL Genomics 90 (5), 583-594 (2007) PUBMED 17913455 REMARK GeneRIF: This paper states that ECAT1 is not found in rodents. REFERENCE 10 (bases 1 to 1027) AUTHORS Mitsui K, Tokuzawa Y, Itoh H, Segawa K, Murakami M, Takahashi K, Maruyama M, Maeda M and Yamanaka S. TITLE The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells JOURNAL Cell 113 (5), 631-642 (2003) PUBMED 12787504...
Synonym: C6orf221; ECAT1; HYDM2
NM_001017361.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 4, mRNA. (1701 bp)
variation 1682 /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="t" /db_xref="dbSNP:3180416" ORIGIN // REFERENCE 1 (bases 1 to 1701) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NM_001297604.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cell division cycle associated 3 (CDCA3), transcript variant 1, mRNA. (1808 bp)
variation 1789 /gene="CDCA3" /gene_synonym="GRCC8; TOME-1" /replace="a" /replace="t" /db_xref="dbSNP:3180416" ORIGIN // REFERENCE 1 (bases 1 to 1808) AUTHORS Hu Q, Fu J, Luo B, Huang M, Guo W, Lin Y, Xie X and Xiao S. TITLE OY-TES-1 may regulate the malignant behavior of liver cancer via NANOG, CD9, CCND2 and CDCA3: a bioinformatic analysis combine with RNAi and oligonucleotide microarray JOURNAL Oncol. Rep. 33 (4), 1965-1975 (2015) PUBMED 25673160 REMARK GeneRIF: OY-TES-1 downregulation in liver cancer cells promotes cell proliferation by upregulating CCND2 and CDCA3. REFERENCE 2...
Synonym: GRCC8; TOME-1
NM_031299.6 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens developmental pluripotency associated 4 (DPPA4), transcript variant 1, mRNA. (2823 bp)
therapeutic target for colon cancer JOURNAL J. Exp. Clin. Cancer Res. 34, 60 (2015) PUBMED 26063247 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2823) AUTHORS Amini S, Fathi F, Mobalegi J, Sofimajidpour H and Ghadimi T. TITLE The expressions of stem cell markers: Oct4, Nanog, Sox2, nucleostemin, Bmi, Zfx, Tcl1, Tbx3, Dppa4, and Esrrb in bladder, colon, and prostate cancer, and certain cancer cell lines JOURNAL Anat Cell Biol 47 (1), 1-11 (2014) PUBMED 24693477 REFERENCE 6 (bases 1 to 2823) AUTHORS Chakravarthy H, Boer B, Desler M, Mallanna SK, McKeithan TW and Rizzino A....
Synonym: 2410091M23Rik
NM_018189.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens steroid receptor RNA activator 1 (SRA1), transcript variant 4, non-coding RNA. (1473 bp)
P, Riddick G, Fucharoen S and Felsenfeld G. TITLE Association of the Long Non-coding RNA Steroid Receptor RNA Activator (SRA) with TrxG and PRC2 Complexes JOURNAL PLoS Genet. 11 (10), E1005615 (2015) PUBMED 26496121 REMARK GeneRIF: in human pluripotent stem cells SRA interacts with NANOG and is important for maintenance of the pluripotent state. Publication Status: Online-Only REFERENCE 3 (bases 1 to 1473) AUTHORS Liu Z, Hao C, Huang X, Zhang N, Bao H and Qu Q. TITLE Peripheral blood leukocyte expression level of lncRNA steroid receptor RNA activator (SRA) and its association with polycystic...
Synonym: pp7684; SRA; SRAP; STRAA1
NR_045587.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens steroid receptor RNA activator 1 (SRA1), transcript variant 3, non-coding RNA. (2015 bp)
P, Riddick G, Fucharoen S and Felsenfeld G. TITLE Association of the Long Non-coding RNA Steroid Receptor RNA Activator (SRA) with TrxG and PRC2 Complexes JOURNAL PLoS Genet. 11 (10), E1005615 (2015) PUBMED 26496121 REMARK GeneRIF: in human pluripotent stem cells SRA interacts with NANOG and is important for maintenance of the pluripotent state. Publication Status: Online-Only REFERENCE 3 (bases 1 to 2015) AUTHORS Liu Z, Hao C, Huang X, Zhang N, Bao H and Qu Q. TITLE Peripheral blood leukocyte expression level of lncRNA steroid receptor RNA activator (SRA) and its association with polycystic...
Synonym: pp7684; SRA; SRAP; STRAA1
NR_045586.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

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Redirect URI : http://ggrna.dbcls.jp/hs/nanog
lang : en | div : | spe : hs | query_string : nanog | format : html | download :

0.000 | 0.000 | search_start;
0.069 | 0.069 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:nanog)%7C(nt:nanog)%7C(aa:nanog))?source=Homo sapiens (human)?to=0&format=json
0.148 | 0.079 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:nanog)%7C(nt:nanog)%7C(aa:nanog))?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.151 | 0.003 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]