GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2021-10-17 14:59:31, GGRNA : RefSeq release 207 (Jul, 2021)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Rattus norvegicus zinc finger protein 120-like (LOC102551714), mRNA. (2483 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaatacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggattggtaatctccgaacacataaagtactacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtagcactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttaccaatgtaatgaatgtggtaaagcctttgtatttgatgctagtctccgaaaacatagagcaatacatactggagtgaaaccttatgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaaaaacacatacatactaaagagtaacc...
position 1825
NM_001395021.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus NudC domain containing 3 (Nudcd3), mRNA. (1769 bp)
cgggcagctgcgaggagtaaagccatcctcactgggcacagtgcttccctgaatagaaatgaggttccgttactaaggaaggaaagggatataaatgctggtgagtcatcggcacagatcgggggatgctgaggtaagtttattcacactgagggtgaagtttttctgtgaggacattttgggagcactgttcagtcagtgacagtctggggtccctctgggaaattattatgttctgggaccaggcagataaaagaggacctggaaaatgaaagtgtatccaggaaatgatgaggtcacagtgaccttgtagagggcacctaattctgacccaatgaatggttcagagtgactttctaaaccactgagaaaagaggccaggaggcaggtgctcactttagcagtgcttatgccctgtcagtaagtagaaactggctgcaaggtcaggtgtcccaacctgtcgggaggtgggacctcataggaacctaagatcttgacatttggtatgttggtgacaatgtgggaagccctgggatgagagggaacatccttgcaggacgcctgcaggtggaccacagacacacctgggtacctcaggag...
position 1150
NM_001103362.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus uncharacterized LOC120102432 (LOC120102432), ncRNA. (2790 bp)
cccacggaagacaacacactttccaatttaaatataattggaaataagttgagaaaggatgagacagttggagggcagtaaacatttggttacattttctcaaccttgaagatgaagcctgtgtcctatgaacacagtaggcctattgcataacaatctggttggaagatttatgggaagggctgagaatgctggaatctatcacaactcatgtttttacaactcttctcttatcatttcctgaccacccccctccagtctgtgtggtttgtccactgttacacattctcatgaggtcattatgacctcatttgccttatcagagattctattcataatttcctagtgctgaggaaatttttatcaactgagaaaggcttctgaaagctttaaatgtgtgactgcttcagccttccctgtgcagtggactttgtgggtgaccacttcagtgtcctacagtgaatttttttttttttttggttctttttttttcggagctggggaccgaacccagggccttgcgcttcctaggtagaaatgacccatcccctcctgagtgttagtgggaggcacgctctgacaccgtcagtttctgcggcc...
position 944
XR_005504060.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC103690914), transcript variant X4, mRNA. (1827 bp)
gagaaaccttatgaatataatgaatgtggtaaagcctttgtaggtcagaatagccttaaaaggcatgaaagaattcatactggagagaaaccttatgaatgtaatgaatgtggtaaagcctttgtaggtcagagtaaccttaaagggcatgaaagaattcatggtggagagaaaccttatgaatgtaatgaatgtggtaaaggctttgtatgtaacgatagactccaaacacataaagcaatacatactggagtgaaaccttaagaatgtaagcaatatggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaaca
position 1720
XM_039098335.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC103690914), transcript variant X2, mRNA. (1921 bp)
gagaaaccttatgaatataatgaatgtggtaaagcctttgtaggtcagaatagccttaaaaggcatgaaagaattcatactggagagaaaccttatgaatgtaatgaatgtggtaaagcctttgtaggtcagagtaaccttaaagggcatgaaagaattcatggtggagagaaaccttatgaatgtaatgaatgtggtaaaggctttgtatgtaacgatagactccaaacacataaagcaatacatactggagtgaaaccttaagaatgtaagcaatatggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaaca
position 1814
XM_039098330.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X7, mRNA. (2147 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaaca
position 1872
XM_039098301.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC103690914), transcript variant X1, mRNA. (2165 bp)
gagaaaccttatgaatataatgaatgtggtaaagcctttgtaggtcagaatagccttaaaaggcatgaaagaattcatactggagagaaaccttatgaatgtaatgaatgtggtaaagcctttgtaggtcagagtaaccttaaagggcatgaaagaattcatggtggagagaaaccttatgaatgtaatgaatgtggtaaaggctttgtatgtaacgatagactccaaacacataaagcaatacatactggagtgaaaccttaagaatgtaagcaatatggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaaca
position 2058
XM_039098328.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094816), transcript variant X2, mRNA. (2277 bp)
gagaatctctatgaatgtgatcaatgtggtaaagcctttacatctcatagttctctccaagtacataaaagaatacatactggagagaagccctatgtatgtgatcaatgtggtaaagacttcgtagttccgagtgatcttaaaagacataaaagaacacatactgaagagaaactttacaaatgtaatgaatgtggtaaggcctttgtctgtaatgctagtctccgaaaacataaagcaacacatactggagtgaaacctttcgattgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttagaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctatgaatgtaaccaatgtagtaaagcctttactgtgatcttcaaaggtatggtggtttaaatatacttggcccatggcaagtggcagtgttaggaggtatggcctttttggagtagatgtgacctttgaggaagtatgtcaatgtggaggggggatgggctttcaga...
position 1790
XM_039084925.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC103690914), transcript variant X3, mRNA. (2351 bp)
gagaaaccttatgaatataatgaatgtggtaaagcctttgtaggtcagaatagccttaaaaggcatgaaagaattcatactggagagaaaccttatgaatgtaatgaatgtggtaaagcctttgtaggtcagagtaaccttaaagggcatgaaagaattcatggtggagagaaaccttatgaatgtaatgaatgtggtaaaggctttgtatgtaacgatagactccaaacacataaagcaatacatactggagtgaaaccttaagaatgtaagcaatatggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaaca
position 2244
XM_039098333.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X8, mRNA. (2546 bp)
gaaaaaccctacaaatgtaatcaatgtggtaaagcctttgaacgtcgttgtactcttggaaggcataaactaatacatactggaagaaaatcctacaaatgcaatcagtgtggtaaagcctttgcacgacacagtcatctcaaaacgcatggaataacacatactggagagaaaccttacgaatgtgatcaatgtggtaaagcctttgcatatcatagttatctccaagtacataaaagaatacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaactttgacaacatgaaagaattcatactggagagcaaccttaaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacgtactaaagagtaaccg...
position 1796
XM_039098303.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094816), transcript variant X1, mRNA. (2548 bp)
gagaatctctatgaatgtgatcaatgtggtaaagcctttacatctcatagttctctccaagtacataaaagaatacatactggagagaagccctatgtatgtgatcaatgtggtaaagacttcgtagttccgagtgatcttaaaagacataaaagaacacatactgaagagaaactttacaaatgtaatgaatgtggtaaggcctttgtctgtaatgctagtctccgaaaacataaagcaacacatactggagtgaaacctttcgattgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttagaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctatgaatgtaaccaatgtagtaaagcctttactgtgatcttcaaaggtatggtggtttaaatatacttggcccatggcaagtggcagtgttaggaggtatggcctttttggagtagatgtgacctttgaggaagtatgtcaatgtggaggggggatgggctttcaga...
position 2061
XM_039084924.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus syncoilin, intermediate filament protein (Sync), transcript variant X3, mRNA. (3793 bp)
ttcggagctggggaccgaacccagggccttgcgcttcctaggtaagcgctctaccactgagctaaatccccagccccataatttactcttaaaatagtgtcaaattaaaaccaccacaagaccccacttatatatagtcctggatggcctagaactcactttgtagacaatgttggccctgaattcagagctatgcctgcctctacctctggagtgctgggactaaaggcacgacaggcttgtttttgagaccaggcctcaagtagtctaggctggtttctaacttgttatgtaggtcaggatgaccttgaacttctgatcttgcttctacctcccaactgctgggactacaggtgtgcaccatcaagcacgacccaagacacaccccaacctccagagtcaccgtcaccatggattgctgctctggctgtcctgggactcagaggagggactcaaactcatggaaatctacctgcctcacaagagctaggattaagtgtgcaccaccatgcccagcttgataatttttactacatgctaatgtaaccagaactcctaggaatgacttcagatttggaccagacactttgtttttcaaac...
position 2673
XM_039110357.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus syncoilin, intermediate filament protein (Sync), transcript variant X2, mRNA. (3811 bp)
ttcggagctggggaccgaacccagggccttgcgcttcctaggtaagcgctctaccactgagctaaatccccagccccataatttactcttaaaatagtgtcaaattaaaaccaccacaagaccccacttatatatagtcctggatggcctagaactcactttgtagacaatgttggccctgaattcagagctatgcctgcctctacctctggagtgctgggactaaaggcacgacaggcttgtttttgagaccaggcctcaagtagtctaggctggtttctaacttgttatgtaggtcaggatgaccttgaacttctgatcttgcttctacctcccaactgctgggactacaggtgtgcaccatcaagcacgacccaagacacaccccaacctccagagtcaccgtcaccatggattgctgctctggctgtcctgggactcagaggagggactcaaactcatggaaatctacctgcctcacaagagctaggattaagtgtgcaccaccatgcccagcttgataatttttactacatgctaatgtaaccagaactcctaggaatgacttcagatttggaccagacactttgtttttcaaac...
position 2691
XM_006238944.4 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094816), transcript variant X3, mRNA. (2700 bp)
gagaatctctatgaatgtgatcaatgtggtaaagcctttacatctcatagttctctccaagtacataaaagaatacatactggagagaagccctatgtatgtgatcaatgtggtaaagacttcgtagttccgagtgatcttaaaagacataaaagaacacatactgaagagaaactttacaaatgtaatgaatgtggtaaggcctttgtctgtaatgctagtctccgaaaacataaagcaacacatactggagtgaaacctttcgattgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttagaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctatgaatgtaaccaatgtagtaaagcctttactgtgatcttcaaaggtatggtggtttaaatatacttggcccatggcaagtggcagtgttaggaggtatggcctttttggagtagatgtgacctttgaggaagtatgtcaatgtggaggggggatgggctttcaga...
position 2213
XM_039084926.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 729-like (LOC102548633), transcript variant X1, mRNA. (2879 bp)
agagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacgtttcaaatgtaagcaatgtggtaaagcctttgtaggtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtttttgattctagtctccgaaaacataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaagcctttgtaggtcagaatgaccttaaaaagcatgaaagaattcatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaacttcgacaacatgaaagaattgatacaggagagaaaccttaaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacatactaaagagtaacct...
position 2223
XM_039098323.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 120-like (LOC102548076), transcript variant X1, mRNA. (2884 bp)
gagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacagtagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaacataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaactttgacaacatgaaagaattcatactggagagcaaccttacaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacatactaaagagtaacc...
position 2133
XM_039098348.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X1, mRNA. (3096 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaac
position 2822
XM_039098282.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus uncharacterized LOC102551617 (LOC102551617), ncRNA. (4573 bp)
cttaggagaaatttctagatagtacatccagaaatctttctttgcccgagtcagtcttctgctagtttttctggaaagactctgaacaatagtaagtagtatgataatggacaatacccttctcattactcccctagcccctgtgagcatcagctgtcccttacagggagttgaatatataatgttctgcgataactttaaaaaggaatgcaagaatgattttgctttttgcccgtgctttcaatacttcctcttaagcatagttcatatcatagatggaattcttttactacaggtcattatgacctgcaaggcaggcagagggtatttgtcgtgtaaatggaaggctcccaatatgaagtttcagtatcgctgtcagcaaaggatacctatttcccaagttcactggctgtagaaagaaccagattccctttaggggcaactcatcacagtattatacctttcgcaggaccatagacacttgtcttctctgacatggaactataactatatgtacttcaaaattttaccatgttttccctaatgtctaaagttcctaagaggacgataaaagaactaggacactctgttcatcttttc...
position 2167
XR_362411.4 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X6, mRNA. (3127 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2637
XM_039084905.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X5, mRNA. (3129 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2639
XM_039084904.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X3, mRNA. (3195 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2705
XM_039084902.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X2, mRNA. (3196 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2706
XM_039084901.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X11, mRNA. (3265 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2775
XM_039084910.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X8, mRNA. (3267 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2777
XM_039084907.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X12, mRNA. (3355 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2865
XM_039084911.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X4, mRNA. (3373 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaaca
position 3098
XM_039098294.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus syncoilin, intermediate filament protein (Sync), transcript variant X1, mRNA. (4719 bp)
ttcggagctggggaccgaacccagggccttgcgcttcctaggtaagcgctctaccactgagctaaatccccagccccataatttactcttaaaatagtgtcaaattaaaaccaccacaagaccccacttatatatagtcctggatggcctagaactcactttgtagacaatgttggccctgaattcagagctatgcctgcctctacctctggagtgctgggactaaaggcacgacaggcttgtttttgagaccaggcctcaagtagtctaggctggtttctaacttgttatgtaggtcaggatgaccttgaacttctgatcttgcttctacctcccaactgctgggactacaggtgtgcaccatcaagcacgacccaagacacaccccaacctccagagtcaccgtcaccatggattgctgctctggctgtcctgggactcagaggagggactcaaactcatggaaatctacctgcctcacaagagctaggattaagtgtgcaccaccatgcccagcttgataatttttactacatgctaatgtaaccagaactcctaggaatgacttcagatttggaccagacactttgtttttcaaac...
position 3599
XM_039110356.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X4, mRNA. (3659 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3169
XM_039084903.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 729-like (LOC102548633), transcript variant X2, mRNA. (3671 bp)
agagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacgtttcaaatgtaagcaatgtggtaaagcctttgtaggtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtttttgattctagtctccgaaaacataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaagcctttgtaggtcagaatgaccttaaaaagcatgaaagaattcatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaacttcgacaacatgaaagaattgatacaggagagaaaccttaaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacatactaaagagtaacct...
position 3015
XM_039098324.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X1, mRNA. (3727 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3237
XM_039084900.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X9, mRNA. (3730 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3240
XM_039084908.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X7, mRNA. (3798 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3308
XM_039084906.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus nuclear VCP-like (Nvl), transcript variant X5, mRNA. (5119 bp)
atgaaattgataatgggttggtgaaatgattcagcaggtaaaaacacttgctaccaagcgttacaacctgatcttgatcctggggagtcacgtggtgggaagaactaactcctaaaagctgtactctgaccctgtggatctcagtcgagatctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacacacacacacacgcaaacacacacattaaattggaaaaatacaactgaaataaaattagagttatggttgcaaaggtcaacatgacctttatcatggggacttggcagaggtttataggtacagaatgacactgttcaatgaagaacgtaaaggaaacaactggatcccagaatgagggcgattggagagttagaaataagtgccagaaaaacctttaatagtgagcctgagctgttgagcctgatgccacacttgctgtatgccaaatgaaaacgctgtctgccatgtcggatcttctcgacaactgaatgctgggtctaagtgcatgtattcctggtgacctggacataaaatgcaggttgtgtctgctgtggtacaa...
position 4014
XM_039090562.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X6, mRNA. (4050 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaaca
position 3775
XM_039098299.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus nuclear VCP-like (Nvl), transcript variant X6, mRNA. (5275 bp)
atgaaattgataatgggttggtgaaatgattcagcaggtaaaaacacttgctaccaagcgttacaacctgatcttgatcctggggagtcacgtggtgggaagaactaactcctaaaagctgtactctgaccctgtggatctcagtcgagatctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacacacacacacacgcaaacacacacattaaattggaaaaatacaactgaaataaaattagagttatggttgcaaaggtcaacatgacctttatcatggggacttggcagaggtttataggtacagaatgacactgttcaatgaagaacgtaaaggaaacaactggatcccagaatgagggcgattggagagttagaaataagtgccagaaaaacctttaatagtgagcctgagctgttgagcctgatgccacacttgctgtatgccaaatgaaaacgctgtctgccatgtcggatcttctcgacaactgaatgctgggtctaagtgcatgtattcctggtgacctggacataaaatgcaggttgtgtctgctgtggtacaa...
position 4170
XM_006250372.4 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus nuclear VCP-like (Nvl), transcript variant X4, mRNA. (5402 bp)
atgaaattgataatgggttggtgaaatgattcagcaggtaaaaacacttgctaccaagcgttacaacctgatcttgatcctggggagtcacgtggtgggaagaactaactcctaaaagctgtactctgaccctgtggatctcagtcgagatctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacacacacacacacgcaaacacacacattaaattggaaaaatacaactgaaataaaattagagttatggttgcaaaggtcaacatgacctttatcatggggacttggcagaggtttataggtacagaatgacactgttcaatgaagaacgtaaaggaaacaactggatcccagaatgagggcgattggagagttagaaataagtgccagaaaaacctttaatagtgagcctgagctgttgagcctgatgccacacttgctgtatgccaaatgaaaacgctgtctgccatgtcggatcttctcgacaactgaatgctgggtctaagtgcatgtattcctggtgacctggacataaaatgcaggttgtgtctgctgtggtacaa...
position 4297
XM_006250370.3 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus nuclear VCP-like (Nvl), transcript variant X3, mRNA. (5406 bp)
atgaaattgataatgggttggtgaaatgattcagcaggtaaaaacacttgctaccaagcgttacaacctgatcttgatcctggggagtcacgtggtgggaagaactaactcctaaaagctgtactctgaccctgtggatctcagtcgagatctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacacacacacacacgcaaacacacacattaaattggaaaaatacaactgaaataaaattagagttatggttgcaaaggtcaacatgacctttatcatggggacttggcagaggtttataggtacagaatgacactgttcaatgaagaacgtaaaggaaacaactggatcccagaatgagggcgattggagagttagaaataagtgccagaaaaacctttaatagtgagcctgagctgttgagcctgatgccacacttgctgtatgccaaatgaaaacgctgtctgccatgtcggatcttctcgacaactgaatgctgggtctaagtgcatgtattcctggtgacctggacataaaatgcaggttgtgtctgctgtggtacaa...
position 4301
XM_017598728.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X3, mRNA. (4323 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaaca
position 4048
XM_039098290.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X2, mRNA. (4335 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaa
position 4062
XM_039098285.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC103693496), transcript variant X5, mRNA. (4582 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaaaacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggaatggtagtctccgaacacataaagtaatacatagtggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcactgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaatataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtatgtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttacaaatgtaatgaatgtggtaaagcctttgtatttgattctagtctccgaaaaca
position 4307
XM_039098296.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC100911813), transcript variant X1, mRNA. (4606 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctatgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3066
XM_039084913.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC100911813), transcript variant X3, mRNA. (4609 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctatgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3069
XM_039084915.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus sperm motility kinase X-like (LOC100911813), transcript variant X2, mRNA. (4677 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctatgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 3137
XM_039084914.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus nuclear VCP-like (Nvl), transcript variant X2, mRNA. (6148 bp)
atgaaattgataatgggttggtgaaatgattcagcaggtaaaaacacttgctaccaagcgttacaacctgatcttgatcctggggagtcacgtggtgggaagaactaactcctaaaagctgtactctgaccctgtggatctcagtcgagatctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacacacacacacacgcaaacacacacattaaattggaaaaatacaactgaaataaaattagagttatggttgcaaaggtcaacatgacctttatcatggggacttggcagaggtttataggtacagaatgacactgttcaatgaagaacgtaaaggaaacaactggatcccagaatgagggcgattggagagttagaaataagtgccagaaaaacctttaatagtgagcctgagctgttgagcctgatgccacacttgctgtatgccaaatgaaaacgctgtctgccatgtcggatcttctcgacaactgaatgctgggtctaagtgcatgtattcctggtgacctggacataaaatgcaggttgtgtctgctgtggtacaa...
position 5043
XM_006250367.4 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 729-like (LOC102556098), mRNA. (4961 bp)
gagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcaaatgtaagcagtgtggtaaagcctttgtaggtcagaattaccttaaaaagcatgaaagaattcatactggagagaaactttatgaatgtaatgaatgtggtaaagcttttgtatttgatgctagtctccgaaaacataaagcagtacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacaaatggaatgaatgaattaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaactttgacaacatgaaagaattcatactggagagcaaccttacaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacatactaaagagtaacc...
position 4306
XM_039098347.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus oxysterol binding protein-like 3 (Osbpl3), transcript variant X4, mRNA. (10662 bp)
ttctgagtttgccccggaagcagaaatccaatgctcctggtggaaggagcctgattgtctgtagtgaggagagtaggtgtggttgcccacttaactgagctctgtggttccatactctcacaatgtctactttctagcctagaggcctgccaggggtgtgggttagttagtgttgtataataaactgggttagttagtgttgtgtaataaactttggcaaagctaactctccaaacaaaatgttttacttgggcatccataagacttagaattgcaaccatcaacacatgtagaggtcagggtgacctcttgcatgtctagggaacaaagacaagattacagggtgctacactttgattgtgaaatgtcctgcacaggtttatgtattacagttagtccctagccaatgtcaccactttgtaaagttgtggaacttttaagaggtggggcctagctgaagtaggtcagttgggcttgggccgtgagagttatagctgatcccgacttcctctttgatgctcgctgggctgagtctcttgagatgtgagcaggcaagcagtctcagactcccaccactatggacccagccttgagcttcgt...
position 3499
XM_006236518.3 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 120-like (LOC102548076), transcript variant X2, mRNA. (7645 bp)
gaaaaaccctacaaatgtaatcaatgtggtaaagcttttgaacgtcgttgtaatcttggaaagcataaactaatacatactggaagaaaatcctacaaatgcaatcagtgtggtaaagcctttgcacgacacagtcatctcaaaacgcatggaataacacatactggagagaaaccttacgaatgtgatcaatgtggtaaagcctttgcatatcatagttatctccaagtacataaaagaatacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaactttgacaacatgaaagaattcatactggagagcaaccttacaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacatactaaagagtaacc...
position 6894
XM_039098349.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus hypothetical protein LOC100362814 (LOC100362814), transcript variant X5, mRNA. (10111 bp)
aatgtttagttgattcggacaagtaaaatacagcattataaatcagattccctttaaactagacaccgtgtgttcaagaagcctatgcaaagaaaaccttaaattaatgaaaaaattcatagtcatattttcccaccatgattaaagcctcctgggactgagatgttgttccttccctaaagagtctcctaatcttagcatagaagactctgagaagttcagatggttaaaatcatgagatataaaagtgagctgaagttccacaggcacccagaggaggctgcagtgagctcaggtcatcatgaccttcgacagtccccgaagccatagaggatctcagtggtttggaaggaggaagccaaactccagacaagtggagggttgagccccagcctgctgattcatgccccagcctgctctccatttcaccaagctgcctgttcacttggggacacatttctctaactgtgcccaggggaaaaaaaaaaaaaggcagggtttatgtgagagattccatattgctcttgccaaaagaaaagtaaaagaaagaaagaaaaaaaaaaccaatttggctgtttccagagagttccactggagact...
position 6958
XM_039106457.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant X10, mRNA. (8502 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 8012
XM_039084909.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus hypothetical protein LOC100362814 (LOC100362814), transcript variant X4, mRNA. (10456 bp)
aatgtttagttgattcggacaagtaaaatacagcattataaatcagattccctttaaactagacaccgtgtgttcaagaagcctatgcaaagaaaaccttaaattaatgaaaaaattcatagtcatattttcccaccatgattaaagcctcctgggactgagatgttgttccttccctaaagagtctcctaatcttagcatagaagactctgagaagttcagatggttaaaatcatgagatataaaagtgagctgaagttccacaggcacccagaggaggctgcagtgagctcaggtcatcatgaccttcgacagtccccgaagccatagaggatctcagtggtttggaaggaggaagccaaactccagacaagtggagggttgagccccagcctgctgattcatgccccagcctgctctccatttcaccaagctgcctgttcacttggggacacatttctctaactgtgcccaggggaaaaaaaaaaaaaggcagggtttatgtgagagattccatattgctcttgccaaaagaaaagtaaaagaaagaaagaaaaaaaaaaccaatttggctgtttccagagagttccactggagact...
position 7303
XM_017592182.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/rn/iub%3aaggtcannrtgacct
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0.000 | 0.000 | search_start;
0.094 | 0.094 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((nt:aggtcaaaatgacct)%7C(nt:aggtcaatatgacct)%7C(nt:aggtcaagatgacct)%7C(nt:aggtcaacatgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcagaatgacct)%7C(nt:aggtcagtatgacct)%7C(nt:aggtcaggatgacct)%7C(nt:aggtcagcatgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaaagtgacct)%7C(nt:aggtcaatgtgacct)%7C(nt:aggtcaaggtgacct)%7C(nt:aggtcaacgtgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcagagtgacct)%7C(nt:aggtcagtgtgacct)%7C(nt:aggtcagggtgacct)%7C(nt:aggtcagcgtgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcaccgtgacct))?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.920 | 0.825 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((nt:aggtcaaaatgacct)%7C(nt:aggtcaatatgacct)%7C(nt:aggtcaagatgacct)%7C(nt:aggtcaacatgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcagaatgacct)%7C(nt:aggtcagtatgacct)%7C(nt:aggtcaggatgacct)%7C(nt:aggtcagcatgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaaagtgacct)%7C(nt:aggtcaatgtgacct)%7C(nt:aggtcaaggtgacct)%7C(nt:aggtcaacgtgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcagagtgacct)%7C(nt:aggtcagtgtgacct)%7C(nt:aggtcagggtgacct)%7C(nt:aggtcagcgtgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcaccgtgacct))?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.961 | 0.042 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]