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Previous release (v1)
2024-11-01 18:38:03, GGRNA : RefSeq release 226 (Sep, 2024)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..5738 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute-1" /map="50C9-50C17" /db_xref="FLYBASE:FBgn0262739" /db_xref="GeneID:36544" CDS 323..3175 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671;...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29;
argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_079010.4 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..7888 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute-1" /map="50C9-50C17" /db_xref="FLYBASE:FBgn0262739" /db_xref="GeneID:36544" CDS 349..3303 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671;...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29;
argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_001259385.1 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..3481 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute-1" /map="50C9-50C17" /db_xref="FLYBASE:FBgn0262739" /db_xref="GeneID:36544" CDS 92..3046 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671;...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29;
argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_166020.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene 1..7528 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute-1" /map="50C9-50C17" /db_xref="FLYBASE:FBgn0262739" /db_xref="GeneID:36544" CDS 349..3303 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671;...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29;
argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_166021.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="Argonaute 2" /map="71E1-71E1" /db_xref="FLYBASE:FBgn0087035" /db_xref="GeneID:39683" CDS 1110..3473 /gene="AGO2" /locus_tag="Dmel_CG7439" /gene_synonym="AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="CG7439 gene product from transcript CG7439-RE; CG7439-PE; AGO2-PE; argonaute-2; ARGONAUTE2; argonaute 2" /codon_start=1 /product="argonaute 2,...
Synonym: AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a;
argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2
NM_001274953.1 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="Argonaute 2" /map="71E1-71E1" /db_xref="FLYBASE:FBgn0087035" /db_xref="GeneID:39683" CDS 95..3739 /gene="AGO2" /locus_tag="Dmel_CG7439" /gene_synonym="AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="CG7439 gene product from transcript CG7439-RB; CG7439-PB; AGO2-PB; argonaute-2; ARGONAUTE2; argonaute 2" /codon_start=1 /product="argonaute 2, isoform...
Synonym: AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a;
argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2
NM_140518.3 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="Argonaute 2" /map="71E1-71E1" /db_xref="FLYBASE:FBgn0087035" /db_xref="GeneID:39683" CDS 153..3806 /gene="AGO2" /locus_tag="Dmel_CG7439" /gene_synonym="AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="CG7439 gene product from transcript CG7439-RC; CG7439-PC; AGO2-PC; argonaute-2; ARGONAUTE2; argonaute 2" /codon_start=1 /product="argonaute 2, isoform...
Synonym: AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a;
argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2
NM_168626.3 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="Argonaute 3; Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, " /map="80F9-80F9" /db_xref="FLYBASE:FBgn0250816" /db_xref="GeneID:3355150" CDS 101..2704 /gene="AGO3" /locus_tag="Dmel_CG40300" /gene_synonym="Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="CG40300 gene product from transcript CG40300-RF; CG40300-PF; AGO3-PF; Argonaute-3; Argonaute3; BEST:LD15785" /codon_start=1 /product="argonaute 3, isoform F" /protein_id="NP_001036628.2" /db_xref="FLYBASE:...
Synonym: Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300
NM_001043163.3 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="Argonaute 3; Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, " /map="80F9-80F9" /db_xref="FLYBASE:FBgn0250816" /db_xref="GeneID:3355150" CDS 128..2731 /gene="AGO3" /locus_tag="Dmel_CG40300" /gene_synonym="Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="CG40300 gene product from transcript CG40300-RD; CG40300-PD; AGO3-PD; Argonaute-3; Argonaute3; BEST:LD15785" /codon_start=1 /product="argonaute 3, isoform D" /protein_id="NP_001036627.2" /db_xref="FLYBASE:...
Synonym: Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300
NM_001043162.3 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="Argonaute 3; Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, " /map="80F9-80F9" /db_xref="FLYBASE:FBgn0250816" /db_xref="GeneID:3355150" CDS 302..2905 /gene="AGO3" /locus_tag="Dmel_CG40300" /gene_synonym="Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="CG40300 gene product from transcript CG40300-RE; CG40300-PE; AGO3-PE; Argonaute-3; Argonaute3; BEST:LD15785" /codon_start=1 /product="argonaute 3, isoform E" /protein_id="NP_001036629.2" /db_xref="FLYBASE:...
Synonym: Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300
NM_001043164.3 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="Argonaute 3; Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, " /map="80F9-80F9" /db_xref="FLYBASE:FBgn0250816" /db_xref="GeneID:3355150" CDS 128..2728 /gene="AGO3" /locus_tag="Dmel_CG40300" /gene_synonym="Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300" /note="CG40300 gene product from transcript CG40300-RG; CG40300-PG; AGO3-PG; Argonaute-3; Argonaute3; BEST:LD15785" /codon_start=1 /product="argonaute 3, isoform G" /protein_id="NP_001163498.1" /db_xref="FLYBASE:...
Synonym: Ago-3; AGO-3; ago3; Ago3; BEST:LD15785; CG40300; dAgo3; Dmel\CG40300
NM_001170027.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
misc_feature 1757..2170 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 2246..2350 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="UBA domain found in Drosophila melanogaster protein Gawky (GW) and similar proteins; Region: UBA_GAWKY; cd14284" /db_xref="CDD:270470" misc_feature 2435..3142 /...
Synonym: anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182
NM_166780.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
misc_feature 1439..1852 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 1928..2032 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="UBA domain found in Drosophila melanogaster protein Gawky (GW) and similar proteins; Region: UBA_GAWKY; cd14284" /db_xref="CDD:270470" misc_feature 2117..2824 /...
Synonym: anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182
NM_166785.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
misc_feature 1513..1926 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 2002..2106 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="UBA domain found in Drosophila melanogaster protein Gawky (GW) and similar proteins; Region: UBA_GAWKY; cd14284" /db_xref="CDD:270470" misc_feature 2191..2898 /...
Synonym: anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182
NM_166781.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
misc_feature 1396..1809 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 1885..1989 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="UBA domain found in Drosophila melanogaster protein Gawky (GW) and similar proteins; Region: UBA_GAWKY; cd14284" /db_xref="CDD:270470" misc_feature 2074..2781 /...
Synonym: anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182
NM_166784.2 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
misc_feature 1513..1926 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 2002..2106 /gene="gw" /locus_tag="Dmel_CG31992" /gene_synonym="anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182" /note="UBA domain found in Drosophila melanogaster protein Gawky (GW) and similar proteins; Region: UBA_GAWKY; cd14284" /db_xref="CDD:270470" misc_feature 2191..2898 /...
Synonym: anon-EST:Posey205; CG11484; CG31992; CG9905; dGW182; Dmel\CG31992; GQ182; Gw; GW; gw182; Gw182; GW182
NM_001014691.3 -
Drosophila melanogaster (fruit fly) -
NCBI -
UCSC -
FlyBase
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/en/dm/Argonaute
lang : en |
div : |
spe : dm |
query_string : Argonaute |
format : html |
download :
0.000 | 0.000 | search_start;
0.081 | 0.081 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Drosophila melanogaster (fruit fly)?to=0&format=json
0.137 | 0.056 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Drosophila melanogaster (fruit fly)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.139 | 0.002 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]