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2022-12-08 14:38:59, GGRNA : RefSeq release 214 (Sep, 2022)

Summary:

Results:

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Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)
LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This...
XM_024651321.1 - Strongyloides ratti - NCBI
Caenorhabditis remanei hypothetical protein (CRE_14480) mRNA, complete cds. (2583 bp)
misc_feature 16..2415 /locus_tag="CRE_14480" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 73..468 /locus_tag="CRE_14480" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 499..651 /locus_tag="CRE_14480" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 652..1014 /locus_tag="CRE_14480" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003107282.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_08398) mRNA, complete cds. (2571 bp)
misc_feature 79..2424 /locus_tag="CRE_08398" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 79..477 /locus_tag="CRE_08398" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 508..672 /locus_tag="CRE_08398" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 676..1041 /locus_tag="CRE_08398" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003101857.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_09584) mRNA, complete cds. (2709 bp)
misc_feature 73..2559 /locus_tag="CRE_09584" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 157..573 /locus_tag="CRE_09584" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 604..774 /locus_tag="CRE_09584" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 775..1140 /locus_tag="CRE_09584" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003103769.1 - Caenorhabditis remanei - NCBI
PREDICTED: Orcinus orca protein argonaute-4 (LOC101280127), transcript variant X2, mRNA. (6665 bp)
misc_feature 364..618 /gene="LOC101280127" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 649..801 /gene="LOC101280127" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 802..1164 /gene="LOC101280127" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_033422155.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Orcinus orca argonaute RISC catalytic component 3 (LOC101279701), transcript variant X2, mRNA. (15647 bp)
misc_feature 230..514 /gene="LOC101279701" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 542..694 /gene="LOC101279701" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 695..1057 /gene="LOC101279701" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_033422144.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Orcinus orca argonaute RISC component 1 (LOC101279452), transcript variant X2, mRNA. (12944 bp)
misc_feature 363..755 /gene="LOC101279452" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 783..935 /gene="LOC101279452" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 936..1298 /gene="LOC101279452" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_004266468.4 - Orcinus orca (killer whale) - NCBI
PREDICTED: Orcinus orca argonaute RISC component 1 (LOC101279452), transcript variant X1, mRNA. (12955 bp)
misc_feature 365..757 /gene="LOC101279452" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 785..937 /gene="LOC101279452" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 938..1300 /gene="LOC101279452" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_033422151.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Orcinus orca argonaute RISC catalytic component 2 (LOC101289376), transcript variant X3, mRNA. (15901 bp)
misc_feature 1674..1898 /gene="LOC101289376" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 1926..2078 /gene="LOC101289376" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 2079..2441 /gene="LOC101289376" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_004265295.3 - Orcinus orca (killer whale) - NCBI
Caenorhabditis remanei hypothetical protein (CRE_25241) mRNA, complete cds. (3177 bp)
misc_feature 250..2931 /locus_tag="CRE_25241" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 316..750 /locus_tag="CRE_25241" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 841..963 /locus_tag="CRE_25241" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1174..1506 /locus_tag="CRE_25241" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003113068.1 - Caenorhabditis remanei - NCBI
Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. (903 bp)
LOCUS XM_024650915 903 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. ACCESSION XM_024650915 VERSION XM_024650915.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT...
XM_024650915.1 - Strongyloides ratti - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 3 (AGO3), transcript variant X6, mRNA. (15002 bp)
misc_feature 139..480 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(274..276,361..363,373..375,427..429,448..450, 454..456) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 613..1890 /gene="AGO3" /note="PIWI domain,...
XM_025419944.3 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (15062 bp)
misc_feature 199..540 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(334..336,421..423,433..435,487..489,508..510, 514..516) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 673..1950 /gene="AGO3" /note="PIWI domain,...
XM_025419943.3 - Canis lupus dingo (dingo) - NCBI
Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain and Protein of unknown function DUF2650 family-containing protein (SRAE_2000036100), partial mRNA. (3513 bp)
misc_feature 1342..1638 /locus_tag="SRAE_2000036100" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1450..1452,1492..1494,1531..1533,1543..1545, 1594..1596,1615..1617,1621..1623) /locus_tag="SRAE_2000036100" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...
XM_024651181.1 - Strongyloides ratti - NCBI
PREDICTED: Aphis gossypii protein argonaute-2 (LOC114131047), transcript variant X1, mRNA. (5307 bp)
misc_feature 867..1256 /gene="LOC114131047" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 1284..1436 /gene="LOC114131047" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 1437..1799 /gene="LOC114131047" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_027996166.2 - Aphis gossypii (cotton aphid) - NCBI
PREDICTED: Orcinus orca argonaute RISC catalytic component 3 (LOC101279701), transcript variant X5, mRNA. (15078 bp)
misc_feature 147..488 /gene="LOC101279701" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(282..284,369..371,381..383,435..437,456..458, 462..464) /gene="LOC101279701" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 621..1898 /gene="LOC101279701" /...
XM_033422149.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Orcinus orca argonaute RISC catalytic component 3 (LOC101279701), transcript variant X4, mRNA. (20784 bp)
misc_feature 5853..6194 /gene="LOC101279701" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(5988..5990,6075..6077,6087..6089,6141..6143, 6162..6164,6168..6170) /gene="LOC101279701" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 6327..7604 /gene="...
XM_033422147.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Ursus arctos argonaute RISC component 1 (AGO1), transcript variant X3, mRNA. (10571 bp)
misc_feature 139..480 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(274..276,361..363,373..375,427..429,448..450, 454..456) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 613..1890 /gene="AGO1" /note="PIWI domain,...
XM_044390544.2 - Ursus arctos (brown bear) - NCBI
PREDICTED: Ursus arctos argonaute RISC catalytic component 3 (AGO3), transcript variant X9, mRNA. (16963 bp)
misc_feature 132..473 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(267..269,354..356,366..368,420..422,441..443, 447..449) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 606..1883 /gene="AGO3" /note="PIWI domain,...
XM_026516686.3 - Ursus arctos (brown bear) - NCBI
PREDICTED: Ursus arctos argonaute RISC catalytic component 3 (AGO3), transcript variant X8, mRNA. (16953 bp)
misc_feature 122..463 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(257..259,344..346,356..358,410..412,431..433, 437..439) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 596..1873 /gene="AGO3" /note="PIWI domain,...
XM_044390542.2 - Ursus arctos (brown bear) - NCBI
PREDICTED: Ursus arctos argonaute RISC catalytic component 3 (AGO3), transcript variant X7, mRNA. (18302 bp)
misc_feature 1471..1812 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1606..1608,1693..1695,1705..1707,1759..1761, 1780..1782,1786..1788) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1945..3222 /gene="AGO3" /note="PIWI...
XM_026516684.3 - Ursus arctos (brown bear) - NCBI
PREDICTED: Orcinus orca argonaute RISC component 1 (LOC101279452), transcript variant X4, mRNA. (12392 bp)
misc_feature 222..374 /gene="LOC101279452" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 375..737 /gene="LOC101279452" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(531..533,618..620,630..632,684..686,705..707, 711..713) /gene="LOC101279452" /note="nucleic...
XM_033422154.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Ursus arctos argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (18413 bp)
misc_feature 1561..1923 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1717..1719,1804..1806,1816..1818,1870..1872, 1891..1893,1897..1899) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 2056..3333 /gene="AGO3" /note="PIWI...
XM_044390541.2 - Ursus arctos (brown bear) - NCBI
PREDICTED: Orcinus orca argonaute RISC component 1 (LOC101279452), transcript variant X3, mRNA. (12499 bp)
misc_feature 329..481 /gene="LOC101279452" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 482..844 /gene="LOC101279452" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(638..640,725..727,737..739,791..793,812..814, 818..820) /gene="LOC101279452" /note="nucleic...
XM_033422153.2 - Orcinus orca (killer whale) - NCBI
PREDICTED: Marmota marmota marmota argonaute RISC component 1 (LOC107141957), transcript variant X2, mRNA. (7431 bp)
misc_feature 310..702 /gene="LOC107141957" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 730..882 /gene="LOC107141957" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 883..1245 /gene="LOC107141957" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_015485274.2 - Marmota marmota marmota (Alpine marmot) - NCBI
PREDICTED: Capsicum annuum protein argonaute 2 (LOC107858973), mRNA. (3730 bp)
misc_feature 942..1178 /gene="LOC107858973" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 1206..1358 /gene="LOC107858973" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 1359..1712 /gene="LOC107858973" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_016703810.2 - Capsicum annuum - NCBI
Caenorhabditis remanei CRE-ALG-1 protein (Cre-alg-1) mRNA, complete cds. (3069 bp)
feature 424..2865 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 424..840 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature <1009..1110 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1111..1476 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing...
XM_003105478.1 - Caenorhabditis remanei - NCBI
PREDICTED: Ursus arctos protein argonaute-4 (LOC113268300), transcript variant X3, mRNA. (2527 bp)
misc_feature 710..1072 /gene="LOC113268300" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(866..868,911..913,953..955,965..967,1019..1021, 1040..1042,1046..1048) /gene="LOC113268300" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1211..2368 /gene...
XM_044390454.2 - Ursus arctos (brown bear) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (14331 bp)
misc_feature 81..305 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 333..485 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 486..848 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_...
XM_025450841.3 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Homo sapiens argonaute RISC catalytic component 3 (AGO3), transcript variant X7, mRNA. (19922 bp)
misc_feature <1410..1628 /gene="AGO3" /gene_synonym="EIF2C3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1422..1424,1509..1511,1521..1523,1575..1577, 1596..1598,1602..1604) /gene="AGO3" /gene_synonym="EIF2C3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212"...
Synonym: EIF2C3
XM_005270576.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens argonaute RISC catalytic component 3 (AGO3), transcript variant X6, mRNA. (18735 bp)
misc_feature 100..441 /gene="AGO3" /gene_synonym="EIF2C3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(235..237,322..324,334..336,388..390,409..411, 415..417) /gene="AGO3" /gene_synonym="EIF2C3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
Synonym: EIF2C3
XM_017000526.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens argonaute RISC component 4 (AGO4), transcript variant X7, mRNA. (6413 bp)
misc_feature 191..553 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(347..349,392..394,434..436,446..448,500..502, 521..523,527..529) /gene="AGO4" /gene_synonym="EIF2C4" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...
Synonym: EIF2C4
XM_011540884.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (15581 bp)
misc_feature 232..516 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 544..696 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 697..1059 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_025419941.3 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Homo sapiens argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (19690 bp)
misc_feature 1055..1396 /gene="AGO3" /gene_synonym="EIF2C3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1190..1192,1277..1279,1289..1291,1343..1345, 1364..1366,1370..1372) /gene="AGO3" /gene_synonym="EIF2C3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212"...
Synonym: EIF2C3
XM_017000524.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Canis lupus dingo argonaute RISC component 1 (AGO1), transcript variant X3, mRNA. (7484 bp)
misc_feature 311..703 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 731..883 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 884..1246 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_035698761.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Nymphaea colorata protein argonaute 7 (LOC116263874), transcript variant X5, mRNA. (3361 bp)
misc_feature 485..748 /gene="LOC116263874" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 776..928 /gene="LOC116263874" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 929..1279 /gene="LOC116263874" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_031643683.2 - Nymphaea colorata - NCBI
PREDICTED: Canis lupus dingo argonaute RISC component 1 (AGO1), transcript variant X1, mRNA. (7494 bp)
misc_feature 312..704 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 732..884 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 885..1247 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_035698760.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Nymphaea colorata protein argonaute 7 (LOC116263874), transcript variant X6, mRNA. (3433 bp)
misc_feature 557..820 /gene="LOC116263874" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 848..1000 /gene="LOC116263874" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 1001..1351 /gene="LOC116263874" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_031643684.2 - Nymphaea colorata - NCBI
PREDICTED: Nymphaea colorata protein argonaute 7 (LOC116263874), transcript variant X1, mRNA. (3558 bp)
misc_feature 682..945 /gene="LOC116263874" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 973..1125 /gene="LOC116263874" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 1126..1476 /gene="LOC116263874" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_031643682.2 - Nymphaea colorata - NCBI
PREDICTED: Canis lupus dingo argonaute RISC component 1 (AGO1), transcript variant X5, mRNA. (7457 bp)
misc_feature 443..667 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 695..847 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 848..1210 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_035698758.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Anopheles coluzzii protein argonaute-2 (LOC120957828), transcript variant X5, mRNA. (9053 bp)
misc_feature 1565..1927 /gene="LOC120957828" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1721..1723,1808..1810,1820..1822,1874..1876, 1895..1897,1901..1903) /gene="LOC120957828" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 2063..3382 /gene="...
XM_040380212.2 - Anopheles coluzzii - NCBI
PREDICTED: Canis lupus dingo protein argonaute-4 (LOC112663833), transcript variant X2, mRNA. (6269 bp)
misc_feature 153..407 /gene="LOC112663833" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 438..590 /gene="LOC112663833" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 591..953 /gene="LOC112663833" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_035698764.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 2 (AGO2), transcript variant X2, mRNA. (14523 bp)
misc_feature 273..497 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 525..677 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 678..1040 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_035701570.2 - Canis lupus dingo (dingo) - NCBI
Geosmithia morbida PAZ domain (GMORB2_2890), partial mRNA. (3108 bp)
misc_feature 490..732 /locus_tag="GMORB2_2890" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 772..921 /locus_tag="GMORB2_2890" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 925..1464 /locus_tag="GMORB2_2890" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like...
XM_035464866.1 - Geosmithia morbida - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 2 (AGO2), transcript variant X1, mRNA. (14641 bp)
misc_feature 391..615 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 643..795 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 796..1158 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_025450840.3 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (15851 bp)
misc_feature 502..786 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 814..966 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 967..1329 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_025419940.3 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Anopheles coluzzii protein argonaute-2 (LOC120957828), transcript variant X4, mRNA. (9128 bp)
misc_feature 1640..2002 /gene="LOC120957828" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1796..1798,1883..1885,1895..1897,1949..1951, 1970..1972,1976..1978) /gene="LOC120957828" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 2138..3457 /gene="...
XM_040380211.2 - Anopheles coluzzii - NCBI
PREDICTED: Ursus arctos argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (11192 bp)
misc_feature 859..1206 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1015..1017,1060..1062,1102..1104,1114..1116, 1168..1170,1189..1191,1195..1197) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1234..2511 /gene="AGO1" /...
XM_044390543.2 - Ursus arctos (brown bear) - NCBI
PREDICTED: Orcinus orca protein argonaute-4 (LOC101280127), transcript variant X1, mRNA. (6834 bp)
misc_feature 398..787 /gene="LOC101280127" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 818..970 /gene="LOC101280127" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 971..1333 /gene="LOC101280127" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_004266471.4 - Orcinus orca (killer whale) - NCBI
PREDICTED: Ursus arctos argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (17494 bp)
misc_feature 178..462 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:406799" misc_feature 490..642 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:400854" misc_feature 643..1005 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_026516680.3 - Ursus arctos (brown bear) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/Argonaute+%22PAZ+domain%22
lang : en | div : | spe : | query_string : Argonaute "PAZ domain" | format : html | download :

0.000 | 0.000 | search_start;
0.085 | 0.085 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.100 | 0.015 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.278 | 0.178 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.287 | 0.009 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]