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2024-04-20 23:06:26, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Arabidopsis thaliana homeobox-3 (HB-3), mRNA. (1963 bp)
gene="HB-3" /locus_tag="AT2G33880" /gene_synonym="homeobox-3; STIMPY; STIP; T1B8.31; T1B8_31; WOX9; WOX9A; WUSCHEL related homeobox 9A; WUSCHEL-RELATED HOMEOBOX 9" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 341..523 /gene="HB-3" /locus_tag="AT2G33880" /gene_synonym="homeobox-3; STIMPY; STIP; T1B8.31; T1B8_31; WOX9; WOX9A; WUSCHEL related homeobox 9A; WUSCHEL-RELATED HOMEOBOX 9" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(341..343,350..352,485..487,494..499,506..508) /gene="HB-3" /locus_tag="AT2G33880" /gene...
Synonym: homeobox-3; STIMPY; STIP; T1B8.31; T1B8_31; WOX9; WOX9A; WUSCHEL related homeobox 9A; WUSCHEL-RELATED HOMEOBOX 9
NM_001336476.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-3 (HB-3), mRNA. (1620 bp)
RELATED HOMEOBOX 9" /inference="Similar to RNA sequence, EST:INSD:EG423239.1,INSD:AV537767.1,INSD:EG423238.1, INSD:AU239368.1,INSD:AV530532.1,INSD:AV549782.1, INSD:EG423251.1,INSD:EG423246.1,INSD:EG423245.1, INSD:BP824090.1,INSD:EG423244.1,INSD:AU230666.1, INSD:EG423253.1,INSD:EG423247.1,INSD:DR749859.1, INSD:EG419637.1,INSD:EG423248.1,INSD:EL325055.1, INSD:EH825006.1,INSD:EG423240.1,INSD:EG423243.1, INSD:EG423242.1,INSD:EG419636.1,INSD:DR749858.1" /inference="similar to RNA sequence, mRNA:INSD:AY251401.1,INSD:AK118501.1" /note="homeobox-3 (HB-3); CONTAINS InterPro DOMAIN/s: Homeobox...
Synonym: homeobox-3; STIMPY; STIP; T1B8.31; T1B8_31; WOX9; WOX9A; WUSCHEL related homeobox 9A; WUSCHEL-RELATED HOMEOBOX 9
NM_128948.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 53 (HB53), mRNA. (941 bp)
NA HOMEOBOX 53; ATHB53; HB-8; homeobox 53; HOMEOBOX-8; MSN2.9; MSN2_9" /inference="Similar to RNA sequence, EST:INSD:DR750230.1,INSD:DR229968.1,INSD:DR750666.1, INSD:DR750667.1" /inference="similar to RNA sequence, mRNA:INSD:BT024847.1,INSD:AY683477.1" /note="homeobox 53 (HB53); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent, root development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox,...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX 53; ATHB53; HB-8; homeobox 53; HOMEOBOX-8; MSN2.9; MSN2_9
NM_126068.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 3 (HB-3), mRNA. (1564 bp)
; HOMEOBOX PROTEIN" /note="Homeodomain; Region: HOX; smart00389" /db_xref="CDD:197696" misc_feature order(710..712,719..721,839..841,848..853,860..862) /gene="HB-3" /locus_tag="AT5G15150" /gene_synonym="ATHB-3; ATHB3; F8M21.40; F8M21_40; HAT7; homeobox 3; HOMEOBOX FROM ARABIDOPSIS THALIANA 7; HOMEOBOX PROTEIN" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 875..991 /gene="HB-3" /locus_tag="AT5G15150" /gene_synonym="ATHB-3; ATHB3; F8M21.40; F8M21_40; HAT7; homeobox 3; HOMEOBOX FROM ARABIDOPSIS THALIANA 7; HOMEOBOX PROTEIN" /note="Homeobox...
Synonym: ATHB-3; ATHB3; F8M21.40; F8M21_40; HAT7; homeobox 3; HOMEOBOX FROM ARABIDOPSIS THALIANA 7; HOMEOBOX PROTEIN
NM_121519.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 22 (HB22), mRNA. (876 bp)
synonym="ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22; ATHB22; F13K3.1; F13K3_1; homeobox protein 22" /inference="Similar to RNA sequence, EST:INSD:DR751034.1,INSD:DR750769.1,INSD:DR750770.1" /inference="similar to RNA sequence, mRNA:INSD:DQ056569.1" /note="homeobox protein 22 (HB22); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: fruit; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22; ATHB22; F13K3.1; F13K3_1; homeobox protein 22
NM_179935.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-leucine zipper protein 4 (HB4), mRNA. (1394 bp)
gene="HB4" /locus_tag="AT2G44910" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4; ATHB-4; ATHB4; homeobox-leucine zipper protein 4; T13E15.8" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 702..854 /gene="HB4" /locus_tag="AT2G44910" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4; ATHB-4; ATHB4; homeobox-leucine zipper protein 4; T13E15.8" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 858..989 /gene="HB4" /locus_tag="AT2G44910" /gene_synonym="...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4; ATHB-4; ATHB4; homeobox-leucine zipper protein 4; T13E15.8
NM_130055.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-leucine zipper protein 17 (HB17), partial mRNA. (1018 bp)
synonym="ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17; ATHB-17; ATHB17; F2I9.5; F2I9_5; homeobox-leucine zipper protein 17" /inference="Similar to RNA sequence, EST:INSD:DR751688.1,INSD:DR751625.1,INSD:DR751538.1, INSD:DR751539.1" /inference="similar to RNA sequence, mRNA:INSD:AJ431181.1" /note="homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17; ATHB-17; ATHB17; F2I9.5; F2I9_5; homeobox-leucine zipper protein 17
NM_126204.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-leucine zipper protein 17 (HB17), partial mRNA. (2359 bp)
on the 5' end. FEATURES Location/Qualifiers source 1..2359 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" gene <1..2359 /gene="HB17" /locus_tag="AT2G01430" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17; ATHB-17; ATHB17; F2I9.5; F2I9_5; homeobox-leucine zipper protein 17" /db_xref="Araport:AT2G01430" /db_xref="GeneID:814671" /db_xref="TAIR:AT2G01430" CDS 1..642 /gene="HB17" /locus_tag="AT2G01430" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17; ATHB-17; ATHB17; F2I9.5; F2I9_5; homeobox-...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17; ATHB-17; ATHB17; F2I9.5; F2I9_5; homeobox-leucine zipper protein 17
NM_001335062.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 21 (HB21), mRNA. (1058 bp)
INSD:DR750746.1,INSD:DR750857.1,INSD:DR750745.1" /inference="similar to RNA sequence, mRNA:INSD:BT031362.1,INSD:BT031368.1" /note="homeobox protein 21 (HB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda...
Synonym: ATHB21; F24H14.10; F24H14_10; HB-2; homeobox protein 21; homeobox-2
NM_127411.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 7 (HB-7), mRNA. (1308 bp)
ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(270..272,279..281,399..401,408..413,420..422) /gene="HB-7" /locus_tag="AT2G46680" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 279..431 /gene="HB-7" /locus_tag="AT2G46680" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6" /note="Homeobox domain; Region: Homeobox;...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6
NM_001036473.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 14 (WOX14), mRNA. (1365 bp)
gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 866..1042 /gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(866..868,875..877,1010..1012,1019..1024,1031..1033) /gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19;...
Synonym: ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14
NM_001332460.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 14 (WOX14), partial mRNA. (866 bp)
gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 280..456 /gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(280..282,289..291,424..426,433..438,445..447) /gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19; WUSCHEL...
Synonym: ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14
NM_001332461.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-leucine zipper protein 3 (HAT3), mRNA. (1447 bp)
locus_tag="AT3G60390" /gene_synonym="HOMEOBOX PROTEIN; homeobox-leucine zipper protein 3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(775..777,784..786,904..906,913..918,925..927) /gene="HAT3" /locus_tag="AT3G60390" /gene_synonym="HOMEOBOX PROTEIN; homeobox-leucine zipper protein 3" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 784..936 /gene="HAT3" /locus_tag="AT3G60390" /gene_synonym="HOMEOBOX PROTEIN; homeobox-leucine zipper protein 3" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_...
Synonym: HOMEOBOX PROTEIN; homeobox-leucine zipper protein 3
NM_115903.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 7 (HB-7), mRNA. (1474 bp)
ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(288..290,297..299,417..419,426..431,438..440) /gene="HB-7" /locus_tag="AT2G46680" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 297..449 /gene="HB-7" /locus_tag="AT2G46680" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6" /note="Homeobox domain; Region: Homeobox;...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX 7; ATHB-7; ATHB7; homeobox 7; T3A4.6
NM_130233.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 14 (WOX14), partial mRNA. (826 bp)
xref="GeneID:838660" /db_xref="TAIR:AT1G20700" CDS 1..636 /gene="WOX14" /locus_tag="AT1G20700" /gene_synonym="ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14" /inference="Similar to RNA sequence, EST:INSD:DR751559.1,INSD:AA585837.1,INSD:T22843.1, INSD:DR751560.1" /inference="similar to RNA sequence, mRNA:INSD:AJ441297.1" /note="WUSCHEL related homeobox 14 (WOX14); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL...
Synonym: ATWOX14; F2D10.19; F2D10_19; WUSCHEL related homeobox 14; WUSCHEL RELATED HOMEOBOX 14
NM_101922.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 12 (HB-12), mRNA. (1054 bp)
." /codon_start=1 /product="homeobox 12" /protein_id="NP_191748.1" /db_xref="GeneID:825362" /db_xref="TAIR:AT3G61890" /db_xref="Araport:AT3G61890" /translation="MEEGDFFNCCFSEISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSSTESHNGKSEPEGRLDQGSVLCNDGDYNNNIKTEYFGFEEETDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQSSSNYPNWWEFWS" misc_feature 251..403 /gene="HB-12" /locus_tag="AT3G61890" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 12; ATHB-12; ATHB12; homeobox 12" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX 12; ATHB-12; ATHB12; homeobox 12
NM_116054.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 8 (WOX8), mRNA. (1151 bp)
db_xref="TAIR:AT5G45980" CDS 36..1013 /gene="WOX8" /locus_tag="AT5G45980" /gene_synonym="MCL19.2; MCL19_2; STIMPY-LIKE; STPL; WOX9B; WUSCHEL related homeobox 8; WUSCHEL related homeobox 9B" /inference="Similar to RNA sequence, EST:INSD:DR750890.1,INSD:AV557790.1,INSD:DR750889.1, INSD:AV556647.1" /inference="similar to RNA sequence, mRNA:INSD:AY251400.1" /note="WUSCHEL related homeobox 8 (WOX8); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: homeobox-3 (TAIR:AT2G33880.1); Has 568 Blast hits to 538...
Synonym: MCL19.2; MCL19_2; STIMPY-LIKE; STPL; WOX9B; WUSCHEL related homeobox 8; WUSCHEL related homeobox 9B
NM_123966.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 10 (WOX10), partial mRNA. (594 bp)
db_xref="TAIR:AT1G20710" CDS 1..594 /gene="WOX10" /locus_tag="AT1G20710" /gene_synonym="F2D10.20; F2D10_20; WOX13B; WUSCHEL related homeobox 10; WUSCHEL related homeobox 13B" /note="WUSCHEL related homeobox 10 (WOX10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is:...
Synonym: F2D10.20; F2D10_20; WOX13B; WUSCHEL related homeobox 10; WUSCHEL related homeobox 13B
NM_101923.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 5 (WOX5), mRNA. (1052 bp)
WUSCHEL related homeobox 5; WUSCHEL related homeobox 5B" /note="Arabidopsis thaliana WOX5 protein mRNA" /db_xref="Araport:AT3G11260" /db_xref="GeneID:820297" /db_xref="TAIR:AT3G11260" CDS 327..875 /gene="WOX5" /locus_tag="AT3G11260" /gene_synonym="WOX5B; WUSCHEL related homeobox 5; WUSCHEL related homeobox 5B" /inference="Similar to RNA sequence, EST:INSD:DR750862.1,INSD:DR751206.1,INSD:DR750861.1, INSD:EH977836.1" /inference="Similar to RNA sequence, mRNA:INSD:AY150812.1,INSD:AY251398.1" /note="WUSCHEL related homeobox 5 (WOX5); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356),...
Synonym: WOX5B; WUSCHEL related homeobox 5; WUSCHEL related homeobox 5B
NM_111961.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 7 (WOX7), partial mRNA. (429 bp)
TAIR:AT5G05770" CDS 61..429 /gene="WOX7" /locus_tag="AT5G05770" /gene_synonym="MJJ3.18; MJJ3_18; WOX5A; WUSCHEL related homeobox 5A; WUSCHEL related homeobox 7" /inference="Similar to RNA sequence, EST:INSD:DR750916.1,INSD:DR751352.1,INSD:DR750917.1" /note="WUSCHEL related homeobox 7 (WOX7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related...
Synonym: MJJ3.18; MJJ3_18; WOX5A; WUSCHEL related homeobox 5A; WUSCHEL related homeobox 7
NM_120659.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 25 (HB25), mRNA. (1553 bp)
chromosome="5" /ecotype="Columbia" gene 1..1553 /gene="HB25" /locus_tag="AT5G65410" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25; ATHB25; homeobox protein 25; MNA5.14; MNA5_14; ZFHD2; ZHD1; ZINC FINGER HOMEODOMAIN 1; ZINC FINGER HOMEODOMAIN 2" /note="Encodes ZFHD2, a member of the zinc...IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087),...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25; ATHB25; homeobox protein 25; MNA5.14; MNA5_14; ZFHD2; ZHD1; ZINC FINGER HOMEODOMAIN 1; ZINC FINGER HOMEODOMAIN 2
NM_125939.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 2 (HB-2), mRNA. (1333 bp)
ecotype="Columbia" gene 1..1333 /gene="HB-2" /locus_tag="AT4G16780" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2; ATHB-2; ATHB2; DL4415W; FCAALL.101; HAT4; homeobox protein 2" /note="Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio...INSD:AF375453.1,INSD:X68145.1, INSD:AY081747.1" /note="homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2; ATHB-2; ATHB2; DL4415W; FCAALL.101; HAT4; homeobox protein 2
NM_117780.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein knotted-1-like 3 (KNAT3), mRNA. (1891 bp)
KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(1173..1175,1182..1184,1311..1313,1320..1325, 1332..1334) /gene="KNAT3" /locus_tag="AT5G25220" /gene_synonym="F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1221..1337 /gene="KNAT3" /locus_tag="AT5G25220" /gene_synonym="F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3" /note="Homeobox KN domain; Region...
Synonym: F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3
NM_001036861.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 22 (HB22), partial mRNA. (820 bp)
incomplete on the 3' end. FEATURES Location/Qualifiers source 1..820 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" gene 1..>820 /gene="HB22" /locus_tag="AT4G24660" /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2" /db_xref="Araport:AT4G24660" /db_xref="GeneID:828568" /db_xref="TAIR:AT4G24660" CDS 125..820 /gene="HB22" /locus_tag="AT4G24660" /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox protein 22; HOMEOBOX...
Synonym: ATHB22; F22K18.140; F22K18_140; homeobox protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2
NM_001341690.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 22 (HB22), mRNA. (1284 bp)
chromosome="4" /ecotype="Columbia" gene 1..1284 /gene="HB22" /locus_tag="AT4G24660" /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2" /db_xref="Araport:AT4G24660" /db_xref="GeneID...INSD:BP818692.1,INSD:EH946790.1" /inference="Similar to RNA sequence, mRNA:INSD:AF439841.1,INSD:AY125563.1" /note="homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain...
Synonym: ATHB22; F22K18.140; F22K18_140; homeobox protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2
NM_118599.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein knotted-1-like 3 (KNAT3), mRNA. (2046 bp)
KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(1303..1305,1312..1314,1441..1443,1450..1455, 1462..1464) /gene="KNAT3" /locus_tag="AT5G25220" /gene_synonym="F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1351..1467 /gene="KNAT3" /locus_tag="AT5G25220" /gene_synonym="F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3" /note="Homeobox KN domain; Region...
Synonym: F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3
NM_122431.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 21 (HB21), mRNA. (1223 bp)
INSD:EG441193.1,INSD:EG441801.1,INSD:EG441148.1, INSD:EG441818.1,INSD:DR368557.1,INSD:EG441189.1, INSD:EG441802.1,INSD:EG441800.1,INSD:EG441807.1, INSD:EG441803.1,INSD:EG441163.1" /inference="similar to RNA sequence, mRNA:INSD:AY773834.1,INSD:AY091515.1" /note="homeobox protein 21 (HB21); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 31...
Synonym: ATHB21; homeobox protein 21; T8K22.16; T8K22_16; ZFHD4; ZHD3; ZINC FINGER HOMEODOMAIN 3; ZINC FINGER HOMEODOMAIN 4
NM_001335126.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 24 (HB24), mRNA. (1065 bp)
EG516460.1, INSD:CB256827.1,INSD:ES117665.1,INSD:ES195904.1, INSD:ES115719.1" /inference="similar to RNA sequence, mRNA:INSD:AY088255.1" /note="homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related...
Synonym: AtHB24; homeobox protein 24; T30D6.14; T30D6_14; ZHD6; ZINC FINGER HOMEODOMAIN 6
NM_127392.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 21 (HB21), mRNA. (1404 bp)
LOCUS NM_126310 1404 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana homeobox protein 21 (HB21), mRNA. ACCESSION NM_126310 VERSION NM_126310.3 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This...
Synonym: ATHB21; homeobox protein 21; T8K22.16; T8K22_16; ZFHD4; ZHD3; ZINC FINGER HOMEODOMAIN 3; ZINC FINGER HOMEODOMAIN 4
NM_126310.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Homeobox-leucine zipper protein family (ATHB54), mRNA. (1269 bp)
synonym="HB54; homeobox protein 54" /note="Encodes ATHB54, a member of the homeodomain leucine zipper (HD-Zip) family protein. Please note that this locus was split from AT1G27050 in the TAIR10 genome release (2010). Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein)." /db_xref="Araport:AT1G27045" /db_xref="GeneID:10723019" /db_xref="TAIR:AT1G27045" CDS 285..968 /gene="ATHB54" /locus_tag="AT1G27045" /gene_synonym="HB54; homeobox protein 54" /note="Homeobox-leucine zipper...
Synonym: HB54; homeobox protein 54
NM_001198174.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 1 (HB-1), mRNA. (1440 bp)
gene="HB-1" /locus_tag="AT3G01470" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 1; ATHB-1; ATHB1; F4P13.2; F4P13_2; HAT5; HD-ZIP-1; homeobox 1; HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS THALIANA 5" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 736..861 /gene="HB-1" /locus_tag="AT3G01470" /gene_synonym="ARABIDOPSIS THALIANA HOMEOBOX 1; ATHB-1; ATHB1; F4P13.2; F4P13_2; HAT5; HD-ZIP-1; homeobox 1; HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS THALIANA 5" /note="Homeobox associated leucine zipper; Region: HALZ; pfam02183" /db_xref="CDD:426641" ORIGIN...
Synonym: ARABIDOPSIS THALIANA HOMEOBOX 1; ATHB-1; ATHB1; F4P13.2; F4P13_2; HAT5; HD-ZIP-1; homeobox 1; HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS THALIANA 5
NM_111013.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-leucine zipper protein 18 (HB18), mRNA. (1099 bp)
inference="similar to RNA sequence, mRNA:INSD:AK118149.1,INSD:BT005594.1,INSD:AK175965.1, INSD:AK175837.1" /note="homeobox-leucine zipper protein 18 (HB18); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper,...
Synonym: ATHB18; F15H11.30; homeobox-leucine zipper protein 18
NM_105760.6 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 4 (WOX4), mRNA. (1367 bp)
db_xref="TAIR:AT1G46480" CDS 233..988 /gene="WOX4" /locus_tag="AT1G46480" /gene_synonym="F2G19.11; F2G19_11; WUSCHEL related homeobox 4" /inference="Similar to RNA sequence, EST:INSD:EL037692.1,INSD:EH969883.1,INSD:DR749964.1, INSD:EH952270.1,INSD:DR749965.1,INSD:T43162.1" /inference="similar to RNA sequence, mRNA:INSD:FJ440850.1,INSD:BT010974.1,INSD:AY251396.1, INSD:BT010692.1" /note="WUSCHEL related homeobox 4 (WOX4); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1...
Synonym: F2G19.11; F2G19_11; WUSCHEL related homeobox 4
NM_103605.7 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox 51 (HB51), mRNA. (1169 bp)
gene="HB51" /locus_tag="AT5G03790" /gene_synonym="ATHB51; homeobox 51; LATE MERISTEM IDENTITY1; LMI1" /inference="Similar to RNA sequence, EST:INSD:EL982910.1,INSD:DR749928.1,INSD:DR750589.1, INSD:DR750590.1,INSD:ES081691.1" /note="homeobox 51 (HB51); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356),...
Synonym: ATHB51; homeobox 51; LATE MERISTEM IDENTITY1; LMI1
NM_120460.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox-leucine zipper protein 18 (HB18), mRNA. (1187 bp)
AT1G70920" /gene_synonym="ATHB18; F15H11.30; homeobox-leucine zipper protein 18" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(525..527,534..536,654..656,663..668,675..677) /gene="HB18" /locus_tag="AT1G70920" /gene_synonym="ATHB18; F15H11.30; homeobox-leucine zipper protein 18" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 690..821 /gene="HB18" /locus_tag="AT1G70920" /gene_synonym="ATHB18; F15H11.30; homeobox-leucine zipper protein 18" /note="Homeobox associated leucine zipper; Region: HALZ;...
Synonym: ATHB18; F15H11.30; homeobox-leucine zipper protein 18
NM_001334482.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 1 (WOX1), mRNA. (1745 bp)
db_xref="GeneID:821325" /db_xref="TAIR:AT3G18010" CDS 271..1323 /gene="WOX1" /locus_tag="AT3G18010" /gene_synonym="WUSCHEL related homeobox 1" /inference="Similar to RNA sequence, EST:INSD:DR368856.1,INSD:DR750706.1,INSD:DR368857.1, INSD:DR750547.1,INSD:DR750546.1,INSD:DR750705.1, INSD:BP605775.1,INSD:EL113193.1" /inference="Similar to RNA sequence, mRNA:INSD:AY251394.1" /note="WUSCHEL related homeobox 1 (WOX1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 2...
Synonym: WUSCHEL related homeobox 1
NM_112682.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 52 (HB52), mRNA. (984 bp)
INSD:DR750925.1,INSD:T45785.1" /inference="similar to RNA sequence, mRNA:INSD:BT021920.1,INSD:AK229211.1,INSD:BT015927.1" /note="homeobox protein 52 (HB52); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to blue light, regulation of transcription, DNA-dependent, response to absence of light; LOCATED IN: nucleus; EXPRESSED IN: root, flower; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Homeodomain-related...
Synonym: ATHB52; homeobox protein 52; K19P17.15; K19P17_15
NM_124777.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 4 (WOX4), mRNA. (1443 bp)
misc_feature order(497..505,509..511,563..565,581..583,632..634, 638..643,650..655,659..667,671..676) /gene="WOX4" /locus_tag="AT1G46480" /gene_synonym="F2G19.11; F2G19_11; WUSCHEL related homeobox 4" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 497..673 /gene="WOX4" /locus_tag="AT1G46480" /gene_synonym="F2G19.11; F2G19_11; WUSCHEL related homeobox 4" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(497..499,506..508,641..643,650..655,662..664) /gene="WOX4" /locus_tag="AT1G46480" /gene_synonym="F2G19.11;...
Synonym: F2G19.11; F2G19_11; WUSCHEL related homeobox 4
NM_001333264.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana WUSCHEL related homeobox 2 (WOX2), mRNA. (1276 bp)
AT5G59340" /db_xref="GeneID:836053" /db_xref="TAIR:AT5G59340" CDS 424..1206 /gene="WOX2" /locus_tag="AT5G59340" /gene_synonym="MNC17.25; MNC17_25; WUSCHEL related homeobox 2" /inference="Similar to RNA sequence, EST:INSD:EL243972.1,INSD:DR751059.1,INSD:EL057549.1, INSD:DR751060.1" /inference="similar to RNA sequence, mRNA:INSD:AY251393.1,INSD:AY251392.1" /note="WUSCHEL related homeobox 2 (WOX2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 921...
Synonym: MNC17.25; MNC17_25; WUSCHEL related homeobox 2
NM_125325.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox leucine zipper protein (HAT14), mRNA. (1639 bp)
this sequence version replaced NM_120754.4. FEATURES Location/Qualifiers source 1..1639 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="5" /ecotype="Columbia" gene 1..1639 /gene="HAT14" /locus_tag="AT5G06710" /gene_synonym="homeobox from Arabidopsis thaliana; MPH15.6; MPH15_6" /note="Homeobox-leucine zipper protein." /db_xref="Araport:AT5G06710" /db_xref="GeneID:830560" /db_xref="TAIR:AT5G06710" CDS 283..1293 /gene="HAT14" /locus_tag="AT5G06710" /gene_synonym="homeobox from Arabidopsis thaliana; MPH15.6; MPH15_6" /inference="Similar to RNA sequence, EST:...
Synonym: homeobox from Arabidopsis thaliana; MPH15.6; MPH15_6
NM_120754.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 23 (AtHB23), mRNA. (1330 bp)
INSD:BP576242.1,INSD:DR751177.1" /inference="similar to RNA sequence, mRNA:INSD:AK228056.1,INSD:AY084913.1,INSD:BT009727.1" /note="homeobox protein 23 (AtHB23); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to gibberellin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif...
Synonym: HB23; homeobox protein 23; T2P11.15; T2P11_15
NM_102460.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 32 (HB32), mRNA. (972 bp)
inference="similar to RNA sequence, mRNA:INSD:BT003942.1,INSD:AY086523.1,INSD:BX817595.1, INSD:BT005027.1" /note="homeobox protein 32 (HB32); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456),...
Synonym: AtHB32; homeobox protein 32; ZHD14; ZINC FINGER HOMEODOMAIN 14
NM_101337.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Homeobox-leucine zipper protein family (ATHB54), mRNA. (1396 bp)
HB54; homeobox protein 54" /note="Encodes ATHB54, a member of the homeodomain leucine zipper (HD-Zip) family protein. Please note that this locus was split from AT1G27050 in the TAIR10 genome release (2010). Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein)." /db_xref="Araport:AT1G27045" /db_xref="GeneID:10723019" /db_xref="TAIR:AT1G27045" CDS 596..1126 /gene="ATHB54" /locus_tag="AT1G27045" /gene_synonym="HB54; homeobox protein 54" /codon_start=1 /product="Homeobox-leucine...
Synonym: HB54; homeobox protein 54
NM_001332739.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Homeobox-leucine zipper protein family (ATHB54), mRNA. (1104 bp)
HB54; homeobox protein 54" /note="Encodes ATHB54, a member of the homeodomain leucine zipper (HD-Zip) family protein. Please note that this locus was split from AT1G27050 in the TAIR10 genome release (2010). Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein)." /db_xref="Araport:AT1G27045" /db_xref="GeneID:10723019" /db_xref="TAIR:AT1G27045" CDS 249..803 /gene="ATHB54" /locus_tag="AT1G27045" /gene_synonym="HB54; homeobox protein 54" /codon_start=1 /product="Homeobox-leucine...
Synonym: HB54; homeobox protein 54
NM_001332742.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Homeobox-leucine zipper protein family (ATHB54), mRNA. (1371 bp)
HB54; homeobox protein 54" /note="Encodes ATHB54, a member of the homeodomain leucine zipper (HD-Zip) family protein. Please note that this locus was split from AT1G27050 in the TAIR10 genome release (2010). Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein)." /db_xref="Araport:AT1G27045" /db_xref="GeneID:10723019" /db_xref="TAIR:AT1G27045" CDS 547..1101 /gene="ATHB54" /locus_tag="AT1G27045" /gene_synonym="HB54; homeobox protein 54" /codon_start=1 /product="Homeobox-leucine...
Synonym: HB54; homeobox protein 54
NM_001332740.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Homeobox-leucine zipper protein family (ATHB54), mRNA. (1244 bp)
HB54; homeobox protein 54" /note="Encodes ATHB54, a member of the homeodomain leucine zipper (HD-Zip) family protein. Please note that this locus was split from AT1G27050 in the TAIR10 genome release (2010). Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein)." /db_xref="Araport:AT1G27045" /db_xref="GeneID:10723019" /db_xref="TAIR:AT1G27045" CDS 285..1043 /gene="ATHB54" /locus_tag="AT1G27045" /gene_synonym="HB54; homeobox protein 54" /codon_start=1 /product="Homeobox-leucine...
Synonym: HB54; homeobox protein 54
NM_001332741.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 28 (HB28), mRNA. (1266 bp)
DR323681.1,INSD:DR267561.1, INSD:DR267564.1,INSD:EL986489.1" /inference="Similar to RNA sequence, mRNA:INSD:AK175649.1,INSD:AY086020.1" /note="homeobox protein 28 (HB28); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain...
Synonym: AtHB28; homeobox protein 28; ZHD7; ZINC FINGER HOMEODOMAIN 7
NM_114949.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 26 (HB26), mRNA. (965 bp)
AT5G60480" /gene_synonym="AtHB26; homeobox protein 26; MUF9.11; MUF9_11; ZHD12; ZINC FINGER HOMEODOMAIN 12" /db_xref="Araport:AT5G60480" /db_xref="GeneID:836169" /db_xref="TAIR:AT5G60480" CDS 128..799 /gene="HB26" /locus_tag="AT5G60480" /gene_synonym="AtHB26; homeobox protein 26; MUF9.11; MUF9_11; ZHD12; ZINC FINGER HOMEODOMAIN 12" /note="homeobox protein 26 (HB26); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455),...
Synonym: AtHB26; homeobox protein 26; MUF9.11; MUF9_11; ZHD12; ZINC FINGER HOMEODOMAIN 12
NM_125441.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein knotted-1-like 6 (KNAT6), mRNA. (1306 bp)
to RNA sequence, mRNA:INSD:AB072362.1" /note="KNOTTED1-like homeobox gene 6 (KNAT6); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: meristem maintenance; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site...
Synonym: F26F24.32; F26F24_32; KNAT6L; KNAT6S; KNOTTED1-like homeobox gene 6
NM_102187.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana homeobox protein 27 (HB27), mRNA. (1040 bp)
INSD:EH795859.1,INSD:ES071685.1,INSD:AU227113.1" /inference="similar to RNA sequence, mRNA:INSD:BT002832.1,INSD:BT004379.1,INSD:AY084367.1" /note="homeobox protein 27 (HB27); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related...
Synonym: AtHB27; homeobox protein 27; MJB21.16; MJB21_16; ZHD13; ZINC FINGER HOMEODOMAIN 13
NM_123643.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR

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lang : en | div : | spe : at | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.165 | 0.165 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Arabidopsis thaliana (thale cress)?to=0&format=json
0.355 | 0.190 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Arabidopsis thaliana (thale cress)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.362 | 0.007 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]